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L3_105_000M1_scaffold_667

Search features with annotation key words

Displaying items 1-30 of 54 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_667_1
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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257..1276
DNA (1020bp) protein (340aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
gap; glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B872_9CLOT
L3_105_000M1_scaffold_667_2
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1370..2842)
DNA (1473bp) protein (491aa)
Putative cysteine synthase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B4H4_9CLOT
Putative cysteine synthase {ECO:0000313|EMBL:CCX50460.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
putative cysteine synthase
L3_105_000M1_scaffold_667_3
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2972..4252)
DNA (1281bp) protein (427aa)
Putative permease n=1 Tax=Clostridium sp. CAG:226 RepID=R5BG98_9CLOT
Putative permease {ECO:0000313|EMBL:CCX50461.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
putative membrane protein
L3_105_000M1_scaffold_667_4
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4256..4663)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BC90_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50462.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
universal stress protein domain-containing protein
L3_105_000M1_scaffold_667_5
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4641..5246)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B589_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50463.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
DprA/Smf-like protein
L3_105_000M1_scaffold_667_6
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5317..6759)
DNA (1443bp) protein (481aa)
Stage II sporulation protein E n=1 Tax=Clostridium sp. CAG:226 RepID=R5B877_9CLOT
Stage II sporulation protein E {ECO:0000313|EMBL:CCX50464.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
stage II sporulation protein E
L3_105_000M1_scaffold_667_7
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6989..8944)
DNA (1956bp) protein (652aa)
Serine/threonine protein kinase (EC:2.7.11.1)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BGA5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50466.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_667_8
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9018..9446
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BC96_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50467.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_667_9
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9546..10289
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BDZ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49641.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
yghJ; inner membrane lipoprotein
L3_105_000M1_scaffold_667_10
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10315..11415
DNA (1101bp) protein (367aa)
D-alanyl-D-alanine dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924}; Short=D-Ala-D-Ala dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924};; EC=3.4.13.22 {ECO:0000256|HAMAP-Rule:MF_01924};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
D-alanyl-D-alanine dipeptidase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B252_9CLOT
D-alanyl-D-alanine dipeptidase
L3_105_000M1_scaffold_667_11
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11412..11951
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B620_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49639.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_667_12
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12064..13368
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0JIA3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT27603.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
Predicted membrane protein involved in D-alanine export
L3_105_000M1_scaffold_667_13
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13382..14743
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BDY6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49636.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
alginate O-acetyltransferase AlgJ
L3_105_000M1_scaffold_667_14
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14827..14991
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B248_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49635.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_667_15
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14996..16375)
DNA (1380bp) protein (460aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B617_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49634.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
efflux protein
L3_105_000M1_scaffold_667_16
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16825..18195)
DNA (1371bp) protein (457aa)
Cell wall surface anchor family protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B222_9CLOT
Cell wall surface anchor family protein {ECO:0000313|EMBL:CCX49323.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
adhesin
L3_105_000M1_scaffold_667_17
Firmicutes bacterium CAG:124, Firmicutes, Bacteria

Not on your lists

comp(18422..18658)
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:124 RepID=R5ISD5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY43209.1}; TaxID=1263002 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:124.;"
Protein of unknown function (DUF3343).
L3_105_000M1_scaffold_667_18
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18655..19788)
DNA (1134bp) protein (378aa)
putative cysteine desulfurase (EC:2.8.1.7)
Cysteine desulfurase family protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B3B2_9CLOT
Cysteine desulfurase family protein {ECO:0000313|EMBL:CCX50040.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_667_19
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19785..20393)
DNA (609bp) protein (203aa)
Selenium metabolism protein YedF n=1 Tax=Clostridium sp. CAG:226 RepID=R5BF70_9CLOT
Selenium metabolism protein YedF {ECO:0000313|EMBL:CCX50041.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_667_20
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20410..21204)
DNA (795bp) protein (265aa)
Putative CoA-substrate-specific enzyme activase n=1 Tax=Clostridium sp. CAG:226 RepID=R5BB32_9CLOT
Putative CoA-substrate-specific enzyme activase {ECO:0000313|EMBL:CCX50042.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
CoA-substrate-specific enzyme activase
L3_105_000M1_scaffold_667_21
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21330..22214)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B459_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50043.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ATPase AAA
L3_105_000M1_scaffold_667_22
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22276..23295
DNA (1020bp) protein (340aa)
Stage II sporulation protein D n=1 Tax=Clostridium sp. CAG:226 RepID=R5B763_9CLOT
Stage II sporulation protein D {ECO:0000313|EMBL:CCX50044.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
stage II sporulation protein D
L3_105_000M1_scaffold_667_23
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23308..24243
DNA (936bp) protein (312aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
pseudouridine synthase (EC:5.4.99.-)
Pseudouridine synthase n=1 Tax=Clostridium sp. CAG:226 RepID=R5B3B6_9CLOT
L3_105_000M1_scaffold_667_24
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24213..25412)
DNA (1200bp) protein (400aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FV59_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE18408.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
ATPase
L3_105_000M1_scaffold_667_25
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25617..26084)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BB37_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50047.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
L3_105_000M1_scaffold_667_26
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26308..27210
DNA (903bp) protein (301aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 5_1_63FAA RepID=E5VPN6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFV15188.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
L3_105_000M1_scaffold_667_27
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(27326..27571)
DNA (246bp) protein (82aa)
30S ribosomal protein S18 n=1 Tax=Clostridium sp. CAG:226 RepID=R5B462_9CLOT
30S ribosomal protein S18 {ECO:0000256|HAMAP-Rule:MF_00270}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
30S ribosomal protein S18
L3_105_000M1_scaffold_667_28
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27613..28041)
DNA (429bp) protein (143aa)
Single-stranded DNA-binding protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B767_9CLOT
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ssb; putative single-stranded DNA-binding protein
L3_105_000M1_scaffold_667_29
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(28073..28360)
DNA (288bp) protein (96aa)
30S ribosomal protein S6 n=1 Tax=Clostridium sp. CAG:226 RepID=R5B3C0_9CLOT
30S ribosomal protein S6 {ECO:0000256|HAMAP-Rule:MF_00360, ECO:0000256|SAAS:SAAS00020539}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
rpsF; 30S ribosomal protein S6
L3_105_000M1_scaffold_667_30
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28617..29336
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5BF76_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50051.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
hypothetical protein
Displaying items 1-30 of 54 in total

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