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L3_105_000M1_scaffold_3494

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_3494_1
Firmicutes bacterium CAG:240, Firmicutes, Bacteria

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comp(1..198)
DNA (198bp) protein (66aa)
Amino acid carrier protein n=1 Tax=Firmicutes bacterium CAG:240 RepID=R6HZL0_9FIRM
Amino acid carrier protein {ECO:0000313|EMBL:CDB43368.1}; TaxID=1263013 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:240.;"
amino acid carrier protein
L3_105_000M1_scaffold_3494_2
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(627..2444)
DNA (1818bp) protein (606aa)
ABC-type multidrug/protein/lipid transport system, ATPase component n=2 Tax=Caldanaerobacter subterraneus RepID=Q8RBI2_THETN
MdlB; ABC-type multidrug/protein/lipid transport system, ATPase component
Tax=BJP_IG2102_Clostridiales_34_350
L3_105_000M1_scaffold_3494_3
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2441..4240)
DNA (1800bp) protein (600aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B9A0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50844.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
multidrug ABC transporter ATPase
L3_105_000M1_scaffold_3494_4
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4416..5150
DNA (735bp) protein (245aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Clostridium sp. CAG:226 RepID=R5B6C3_9CLOT
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:CCX50843.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
short-chain dehydrogenase/reductase SDR
L3_105_000M1_scaffold_3494_5
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5177..6907
DNA (1731bp) protein (577aa)
beta-galactosidase (EC:3.2.1.23)
Glycoside hydrolase family 2 sugar binding n=1 Tax=Clostridium sp. CAG:226 RepID=R5BDB0_9CLOT
Glycoside hydrolase family 2 sugar binding {ECO:0000313|EMBL:CCX50842.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_3494_6
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6887..7918)
DNA (1032bp) protein (344aa)
Putative hydrolase (Metallo-beta-lactamase superfamily) n=1 Tax=Clostridium sp. CAG:226 RepID=R5BHB2_9CLOT
Putative hydrolase (Metallo-beta-lactamase superfamily) {ECO:0000313|EMBL:CCX50841.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
ComEC2; metallo-beta-lactamase fold hydrolase
L3_105_000M1_scaffold_3494_7
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8096..8293
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B5J4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50840.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
L3_105_000M1_scaffold_3494_8
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8361..8609
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B994_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX50839.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Protein of unknown function (DUF1653).
L3_105_000M1_scaffold_3494_9
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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comp(8783..9136)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6MCU3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB96430.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:41.;"
Fe2+/Zn2+ uptake regulation protein
L3_105_000M1_scaffold_3494_10
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9195..9833)
DNA (639bp) protein (213aa)
Rubredoxin n=1 Tax=Clostridium sp. CAG:226 RepID=R5B312_9CLOT
Rubredoxin {ECO:0000313|EMBL:CCX49970.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Uncharacterized flavoproteins
L3_105_000M1_scaffold_3494_11
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9956..10504)
DNA (549bp) protein (183aa)
Transcriptional regulator n=1 Tax=Clostridium sp. CAG:226 RepID=R5BEY8_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:CCX49971.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
Transcriptional regulator
L3_105_000M1_scaffold_3494_12
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10677..11585
DNA (909bp) protein (303aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Clostridium sp. CAG:226 RepID=R5BAV1_9CLOT
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:CCX49972.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
NAD-dependent epimerase/dehydratase
L3_105_000M1_scaffold_3494_13
Clostridium sp. CAG:226, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11655..12269
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:226 RepID=R5B3W6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX49973.1}; TaxID=1262781 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:226.;"
cmk; cytidylate kinase
L3_105_000M1_scaffold_3494_14
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12345..13457)
DNA (1113bp) protein (371aa)
methionine-R-sulfoxide reductase/methionine-S-sulfoxide reductase (EC:1.8.4.11 1.8.4.12)
Methionine-R-sulfoxide reductase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CK99_9FIRM
Methionine-R-sulfoxide reductase {ECO:0000313|EMBL:EHO25567.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
Displaying 14 items

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