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L3_105_000M1_scaffold_2298

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_2298_1
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(698..1375)
DNA (678bp) protein (226aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
4-diphosphocytidyl-2-methyl-D-erithritol synthase (EC:2.7.7.60)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0002E2ABF9
L3_105_000M1_scaffold_2298_2
Clostridium sp. CAG:505, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1572..3059
DNA (1488bp) protein (496aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1262814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:505.;"
gltX; glutamate--tRNA ligase (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Clostridium sp. CAG:505 RepID=R7AJ54_9CLOT
L3_105_000M1_scaffold_2298_3
Ruminococcus sp. CAG:177, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3043..4719
DNA (1677bp) protein (559aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00126}; TaxID=1262952 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:177.;"
glnS; glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase n=1 Tax=Ruminococcus sp. CAG:177 RepID=R6IUL6_9FIRM
L3_105_000M1_scaffold_2298_4
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4723..5337)
DNA (615bp) protein (205aa)
HAD hydrolase family IA variant 1 n=1 Tax=Clostridium sp. CAG:413 RepID=R6NV35_9CLOT
HAD hydrolase family IA variant 1 {ECO:0000313|EMBL:CDC10111.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:413.;"
phosphatase
L3_105_000M1_scaffold_2298_5
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

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5441..5929
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RHG9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC42446.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
GNAT family acetyltransferase
L3_105_000M1_scaffold_2298_6
unknown

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comp(5942..6199)
DNA (258bp) protein (86aa)

This feature has no annotations

L3_105_000M1_scaffold_2298_7
GWC2_Bacteroidetes_46_850_curated, Bacteroidia, Bacteroidetes, Bacteria

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6436..8340
DNA (1905bp) protein (635aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI0002F052D0
hypothetical protein
Tax=GWC2_Bacteroidetes_46_850_curated
L3_105_000M1_scaffold_2298_8
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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8489..8686
DNA (198bp) protein (66aa)
Thiamine biosynthesis protein ThiS n=1 Tax=Blautia sp. CAG:257 RepID=R5WSD4_9FIRM
Thiamine biosynthesis protein ThiS {ECO:0000313|EMBL:CDA06308.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:257.;"
hypothetical protein
L3_105_000M1_scaffold_2298_9
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8690..9337
DNA (648bp) protein (216aa)
thiamine biosynthesis protein ThiF, family 2 (EC:2.7.7.-)
Thiamine biosynthesis protein ThiF n=2 Tax=Clostridiales RepID=B0NHJ6_CLOSV
Thiamine biosynthesis protein ThiF {ECO:0000313|EMBL:EDS05928.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
L3_105_000M1_scaffold_2298_10
Lachnospiraceae bacterium 5_1_57FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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9359..10138
DNA (780bp) protein (260aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=658085 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_57FAA.;"
Thiazole synthase n=2 Tax=Clostridiales RepID=B0NHJ7_CLOSV
thiazole-phosphate synthase
L3_105_000M1_scaffold_2298_11
Roseburia sp. CAG:197, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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10159..11367
DNA (1209bp) protein (403aa)
Thiazole biosynthesis protein ThiH n=1 Tax=Roseburia sp. CAG:197 RepID=R5YEI0_9FIRM
Thiazole biosynthesis protein ThiH {ECO:0000313|EMBL:CDA25275.1}; TaxID=1262943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:197.;"
tyrosine lyase ThiH
L3_105_000M1_scaffold_2298_12
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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11354..11941
DNA (588bp) protein (196aa)
Thiamine monophosphate synthase (EC:2.5.1.3)
Putative thiamine-phosphate diphosphorylase n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5ENR2_9FIRM
Putative thiamine-phosphate diphosphorylase {ECO:0000313|EMBL:EEQ59792.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
L3_105_000M1_scaffold_2298_13
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12003..13742)
DNA (1740bp) protein (580aa)
Ammonium transporter n=1 Tax=Clostridium sp. CAG:678 RepID=R5KIH9_9CLOT
Ammonium transporter {ECO:0000313|EMBL:CCY66620.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
ammonium transporter
L3_105_000M1_scaffold_2298_14
GWF2_Clostridiales_38_85_curated, Clostridiales, Bacteria

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comp(13885..15300)
DNA (1416bp) protein (472aa)
Zn-dependent hydrolase, glyoxylase id=3474302 bin=GWF2_Clostridiales_38_85 species=Clostridium sp. BNL1100 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
metallo-beta-lactamase family protein
Tax=GWF2_Clostridiales_38_85_curated
L3_105_000M1_scaffold_2298_15
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

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comp(15639..16946)
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6U1W2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC76059.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
hypothetical protein
Displaying 15 items

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