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L3_105_000M1_scaffold_1810

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_1810_1
Clostridium sp. CAG:1013, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..1297
DNA (1296bp) protein (432aa)
Putative addiction module antidote protein HigA n=1 Tax=Clostridium sp. CAG:1013 RepID=R5A722_9CLOT
Putative addiction module antidote protein HigA {ECO:0000313|EMBL:CCX36852.1}; TaxID=1262769 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:1013.;"
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
L3_105_000M1_scaffold_1810_2
unknown

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1457..1699
DNA (243bp) protein (81aa)

This feature has no annotations

L3_105_000M1_scaffold_1810_3
unknown

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1727..2035
DNA (309bp) protein (103aa)

This feature has no annotations

L3_105_000M1_scaffold_1810_4
unknown

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2056..2898
DNA (843bp) protein (281aa)

This feature has no annotations

L3_105_000M1_scaffold_1810_5
Dorea formicigenerans, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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2902..7908
DNA (5007bp) protein (1669aa)
Putative uncharacterized protein n=1 Tax=Dorea formicigenerans 4_6_53AFAA RepID=G1WSW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX72976.1}; TaxID=742765 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea formicigenerans 4_6_53AFAA.;"
hypothetical protein
L3_105_000M1_scaffold_1810_6
Eubacterium sp. CAG:180, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8381..9256
DNA (876bp) protein (292aa)
Resolvase N-terminal domain protein n=1 Tax=Eubacterium sp. CAG:180 RepID=R5MJI3_9FIRM
Resolvase N-terminal domain protein {ECO:0000313|EMBL:CCY91583.1}; TaxID=1262882 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:180.;"
hypothetical protein
L3_105_000M1_scaffold_1810_7
unknown

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comp(9188..9340)
DNA (153bp) protein (51aa)

This feature has no annotations

L3_105_000M1_scaffold_1810_8
Slackia heliotrinireducens, Slackia, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

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9502..11544
DNA (2043bp) protein (681aa)
Phosphoglycerol transferase family protein, alkaline phosphatase superfamily n=1 Tax=Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029 / RHS 1) RepID=C7N2Z6_SLAHD
phosphoglycerol transferase
Phosphoglycerol transferase family protein, alkaline phosphatase superfamily {ECO:0000313|EMBL:ACV21517.1}; TaxID=471855 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Slackia.;" source="Slackia heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC 11029; / RHS 1) (Peptococcus heliotrinreducens).;"
L3_105_000M1_scaffold_1810_9
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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11694..12326
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7EIY2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE02849.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
hypothetical protein
L3_105_000M1_scaffold_1810_10
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12323..14047
DNA (1725bp) protein (575aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FVR7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE17797.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
ABC transporter
L3_105_000M1_scaffold_1810_11
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14040..15887
DNA (1848bp) protein (616aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FTH2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE17798.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:841.;"
multidrug ABC transport system ATP-binding and permease protein
L3_105_000M1_scaffold_1810_12
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15919..16797
DNA (879bp) protein (293aa)
Nucleotide-binding protein n=3 Tax=root RepID=B0MK04_9FIRM
Nucleotide-binding protein {ECO:0000313|EMBL:EDS01993.1}; TaxID=428128 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum DSM 15702.;"
dinitrogenase iron-molybdenum cofactor biosynthesis protein
L3_105_000M1_scaffold_1810_13
Roseburia hominis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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16794..17243
DNA (450bp) protein (150aa)
Putative uncharacterized protein n=1 Tax=Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183) RepID=G2T434_ROSHA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN97479.1}; TaxID=585394 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia hominis (strain DSM 16839 / NCIMB 14029 / A2-183).;"
L3_105_000M1_scaffold_1810_14
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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17413..18486
DNA (1074bp) protein (358aa)
Acetyltransferase, GNAT family n=1 Tax=Clostridium leptum DSM 753 RepID=A7VYK3_9CLOT
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EDO59630.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753.;"
GNAT family acetyltransferase
L3_105_000M1_scaffold_1810_15
unknown

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comp(18595..19752)
DNA (1158bp) protein (386aa)

This feature has no annotations

L3_105_000M1_scaffold_1810_16
unknown

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comp(19915..20904)
DNA (990bp) protein (330aa)

This feature has no annotations

L3_105_000M1_scaffold_1810_17
Eubacterium sp. CAG:86, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21099..21815
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:86 RepID=R5E2V4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX83122.1}; TaxID=1262895 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:86.;"
L3_105_000M1_scaffold_1810_18
Ruminococcus sp. CAG:724, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21839..22804
DNA (966bp) protein (322aa)
Putative glycerate dehydrogenase n=1 Tax=Ruminococcus sp. CAG:724 RepID=R5PTT7_9FIRM
Putative glycerate dehydrogenase {ECO:0000313|EMBL:CCZ19985.1}; TaxID=1262966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:724.;"
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein
L3_105_000M1_scaffold_1810_19
Blautia hydrogenotrophica CAG:147, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22801..24105
DNA (1305bp) protein (435aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1263061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia hydrogenotrophica CAG:147.;"
3-phosphoshikimate 1-carboxyvinyltransferase n=2 Tax=Blautia RepID=C0CMN3_9FIRM
3-phosphoshikimate 1-carboxyvinyltransferase
L3_105_000M1_scaffold_1810_20
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

Not on your lists

24110..25204
DNA (1095bp) protein (365aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
Chorismate synthase n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LJ41_9FIRM
chorismate synthase
L3_105_000M1_scaffold_1810_21
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

Not on your lists

25167..26357
DNA (1191bp) protein (397aa)
Chorismate mutase (EC:5.4.99.5)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EGE7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX91755.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
L3_105_000M1_scaffold_1810_22
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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26359..27630
DNA (1272bp) protein (424aa)
Shikimate dehydrogenase/shikimate kinase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AZP5_9FIRM
Shikimate dehydrogenase/shikimate kinase {ECO:0000313|EMBL:CCX47429.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
shikimate kinase
L3_105_000M1_scaffold_1810_23
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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27637..28527
DNA (891bp) protein (297aa)
Transcriptional regulator, LysR family n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BX07_9CLOT
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EEG75605.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
transcriptional regulator, LysR family
L3_105_000M1_scaffold_1810_24
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28620..28961
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BX06_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG75604.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
Predicted transcriptional regulators
Displaying 24 items

View Taxonomy