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L3_105_000M1_scaffold_590

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_590_1
unknown

Not on your lists

2..115
DNA (114bp) protein (38aa)

This feature has no annotations

L3_105_000M1_scaffold_590_2
Ruminococcus albus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(98..469)
DNA (372bp) protein (124aa)
Transcriptional regulator, GntR family n=1 Tax=Ruminococcus albus 8 RepID=E9SAR6_RUMAL
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EGC03507.1}; TaxID=246199 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus albus 8.;"
GntR family transcriptional regulator
L3_105_000M1_scaffold_590_3
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

790..1449
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:62 RepID=R7C852_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD74334.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:62.;"
hypothetical protein
L3_105_000M1_scaffold_590_4
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1593..1772
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5L331_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY67721.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
hypothetical protein
L3_105_000M1_scaffold_590_5
Clostridium sp. CAG:448, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1993..3873)
DNA (1881bp) protein (627aa)
Glycosyl hydrolase family 43 n=1 Tax=Clostridium sp. CAG:448 RepID=R6SKR9_9CLOT
Glycosyl hydrolase family 43 {ECO:0000313|EMBL:CDC60515.1}; TaxID=1262808 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:448.;"
L3_105_000M1_scaffold_590_6
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4021..5040)
DNA (1020bp) protein (340aa)
Oxidoreductase family NAD-binding Rossmann fold protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7EST8_9FIRM
Oxidoreductase family NAD-binding Rossmann fold protein {ECO:0000313|EMBL:CDE05695.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
oxidoreductase
L3_105_000M1_scaffold_590_7
Paenibacillus wynnii, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5061..5891)
DNA (831bp) protein (277aa)
AP endonuclease, family 2 n=1 Tax=Carboxydibrachium pacificum DSM 12653 RepID=B7R6A9_9THEO
Xylulose 5-phosphate 3-epimerase {ECO:0000313|EMBL:KGE17068.1}; TaxID=268407 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus wynnii.;"
xylulose 5-phosphate 3-epimerase
L3_105_000M1_scaffold_590_8
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6004..6519)
DNA (516bp) protein (172aa)
FAD dependent oxidoreductase n=2 Tax=Oscillibacter RepID=U2QDB1_9FIRM
FAD dependent oxidoreductase {ECO:0000313|EMBL:ERK63267.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
Rieske Fe-S protein
L3_105_000M1_scaffold_590_9
unknown

Not on your lists

6677..7117
DNA (441bp) protein (147aa)

This feature has no annotations

L3_105_000M1_scaffold_590_10
Mycoplasma sp. CAG:776, Mycoplasma, Mycoplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(7258..7923)
DNA (666bp) protein (222aa)
ABC-type antimicrobial peptide transport system ATPase component n=1 Tax=Mycoplasma sp. CAG:776 RepID=R7NDR7_9MOLU
ABC-type antimicrobial peptide transport system ATPase component {ECO:0000313|EMBL:CDF10716.1}; TaxID=1262906 species="Bacteria; Tenericutes; Mollicutes; Mycoplasmataceae; Mycoplasma; environmental samples.;" source="Mycoplasma sp. CAG:776.;"
ABC transporter-like protein
L3_105_000M1_scaffold_590_11
Paenibacillus sp. FSL R7-0331, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7941..9128)
DNA (1188bp) protein (396aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIQ52685.1}; TaxID=1536773 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R7-0331.;"
L3_105_000M1_scaffold_590_12
unknown

Not on your lists

comp(9179..9595)
DNA (417bp) protein (139aa)

This feature has no annotations

L3_105_000M1_scaffold_590_13
unknown

Not on your lists

comp(10479..11279)
DNA (801bp) protein (267aa)

This feature has no annotations

L3_105_000M1_scaffold_590_14
unknown

Not on your lists

comp(11701..12669)
DNA (969bp) protein (323aa)

This feature has no annotations

L3_105_000M1_scaffold_590_15
unknown

Not on your lists

comp(12691..13947)
DNA (1257bp) protein (419aa)

This feature has no annotations

L3_105_000M1_scaffold_590_16
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13985..15832)
DNA (1848bp) protein (616aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ENI6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDE04006.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
hypothetical protein
L3_105_000M1_scaffold_590_17
unknown

Not on your lists

16069..17958
DNA (1890bp) protein (630aa)
hypothetical protein n=1 Tax=Alistipes sp. AP11 RepID=UPI00031EAE1F
L3_105_000M1_scaffold_590_18
unknown

Not on your lists

comp(18032..19717)
DNA (1686bp) protein (562aa)

This feature has no annotations

L3_105_000M1_scaffold_590_19
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19871..21349)
DNA (1479bp) protein (493aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RLB2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP18205.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
alpha-L-rhamnosidase
L3_105_000M1_scaffold_590_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21354..22391)
DNA (1038bp) protein (346aa)
Transcriptional regulator, AraC family n=5 Tax=Clostridium difficile RepID=D5RZG9_CLODI
AraC family transcriptional regulator {ECO:0000313|EMBL:CCK94272.1}; TaxID=1225722 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E1.;"
transcriptional regulator AraC family
L3_105_000M1_scaffold_590_21
Clostridium sp. CAG:448, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22388..24946)
DNA (2559bp) protein (853aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:448 RepID=R6TVI0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC62582.1}; TaxID=1262808 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:448.;"
hypothetical protein
L3_105_000M1_scaffold_590_22
RBG_16_OP11_Levybacteria_35_6_curated, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(24994..25722)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1Z2E2_METPS
hypothetical protein
Tax=RBG_16_OP11_Levybacteria_35_6_curated
L3_105_000M1_scaffold_590_23
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26698..29433)
DNA (2736bp) protein (912aa)
Uncharacterized protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FSX2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMS72274.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
hypothetical protein
L3_105_000M1_scaffold_590_24
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29500..29943)
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6T827_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC68370.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
KilA domain-containing protein
L3_105_000M1_scaffold_590_25

Not on your lists

30489..31676
DNA (1188bp) protein (396aa)
trans-2-enoyl-CoA reductase n=1 Tax=Laceyella sacchari RepID=UPI0003B4C08B
putative paraquat-inducible protein B
Putative shortchain alcohol dehydrogenase {ECO:0000313|EMBL:CCO20824.1}; TaxID=433724 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="termite gut metagenome.;"
L3_105_000M1_scaffold_590_26
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(32462..33922)
DNA (1461bp) protein (487aa)
Xylulose kinase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I7P7_CALAS
xylB; xylulose kinase
Tax=GWC1_Treponema_61_84_curated
L3_105_000M1_scaffold_590_27
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33948..35336)
DNA (1389bp) protein (463aa)
L-arabinose isomerase {ECO:0000256|SAAS:SAAS00093763}; EC=5.3.1.4 {ECO:0000256|SAAS:SAAS00093763};; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
L-arabinose isomerase (EC:5.3.1.4)
hypothetical protein n=1 Tax=Paenibacillus daejeonensis RepID=UPI00036170EC
L3_105_000M1_scaffold_590_28
CG_Anaero_02, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(35360..36379)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ESP8_9FIRM
class III aminotransferase
Tax=CG_Anaero_02
L3_105_000M1_scaffold_590_29
Firmicutes bacterium CAG:272, Firmicutes, Bacteria

Not on your lists

comp(36379..36876)
DNA (498bp) protein (166aa)
Conserved protein n=1 Tax=Firmicutes bacterium CAG:272 RepID=R6V037_9FIRM
Conserved protein {ECO:0000313|EMBL:CDC76167.1}; TaxID=1263015 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:272.;"
hypothetical protein
L3_105_000M1_scaffold_590_30

Not on your lists

comp(36881..37585)
DNA (705bp) protein (235aa)
hypothetical protein n=1 Tax=Megamonas rupellensis RepID=UPI00036FD439
Marine sediment metagenome DNA, contig: S01H1_S04311 {ECO:0000313|EMBL:GAF87256.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
Displaying items 1-30 of 43 in total

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