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L3_105_000M1_scaffold_1566

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_1566_1
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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358..1749
DNA (1392bp) protein (464aa)
MATE efflux family protein n=2 Tax=root RepID=R5ATP6_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CCX46735.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
MatE efflux family protein
L3_105_000M1_scaffold_1566_2
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(2043..2831)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B424_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX47682.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
Predicted sugar phosphatases of the HAD superfamily
L3_105_000M1_scaffold_1566_3
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(2923..3501)
DNA (579bp) protein (193aa)
Putative acetyltransferase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AWF2_9FIRM
Putative acetyltransferase {ECO:0000313|EMBL:CCX47680.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L3_105_000M1_scaffold_1566_4
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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3576..4478
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B0E6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX47679.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
putative permease
L3_105_000M1_scaffold_1566_5

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comp(4533..4946)
DNA (414bp) protein (138aa)
Membrane protein containing DUF6, transmembrane n=1 Tax=human gut metagenome RepID=K1RX81_9ZZZZ
Membrane protein containing DUF6, transmembrane {ECO:0000313|EMBL:EKC47899.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Predicted membrane protein
L3_105_000M1_scaffold_1566_6
Eubacterium rectale, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4973..5479)
DNA (507bp) protein (169aa)
Putative uncharacterized protein n=2 Tax=Eubacterium rectale RepID=D6E399_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK89889.1}; TaxID=657318 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium rectale DSM 17629.;"
L3_105_000M1_scaffold_1566_7
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(5908..6594)
DNA (687bp) protein (229aa)
50S ribosomal protein L1 n=2 Tax=root RepID=R5AWX8_9FIRM
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
rplA; 50S ribosomal protein L1
L3_105_000M1_scaffold_1566_8
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(6668..7093)
DNA (426bp) protein (142aa)
50S ribosomal protein L11 n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B3H8_9FIRM
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
rplK; ribosomal protein L11
L3_105_000M1_scaffold_1566_9

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comp(7121..7645)
DNA (525bp) protein (175aa)
Transcription antitermination protein nusG n=1 Tax=human gut metagenome RepID=K1TMD1_9ZZZZ
Transcription antitermination protein nusG {ECO:0000313|EMBL:EKC67465.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
nusG; transcription antitermination protein NusG
L3_105_000M1_scaffold_1566_10

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comp(7647..7913)
DNA (267bp) protein (89aa)
SecE subunit of protein translocation complex n=1 Tax=human gut metagenome RepID=K1U7L9_9ZZZZ
SecE subunit of protein translocation complex {ECO:0000313|EMBL:EKC67466.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
secE; Preprotein translocase subunit SecE
L3_105_000M1_scaffold_1566_11

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comp(7939..8103)
DNA (165bp) protein (55aa)
50S ribosomal protein L33 n=2 Tax=root RepID=R5AZW2_9FIRM
Ribosomal protein L33 {ECO:0000313|EMBL:EKC67467.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
rpmG; 50S ribosomal protein L33
L3_105_000M1_scaffold_1566_12
Ruminococcus sp. CAG:563, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8335..10071)
DNA (1737bp) protein (579aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:563 RepID=R6EGK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA89162.1}; TaxID=1262961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:563.;"
transporter, NhaC family (TC 2.A.35)
L3_105_000M1_scaffold_1566_13
Oscillibacter sp. KLE 1745, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10474..11415)
DNA (942bp) protein (314aa)
branched-chain amino acid ABC transporter permease n=1 Tax=Clostridiales bacterium NK3B98 RepID=UPI0003B70774
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:ERK57105.1}; TaxID=1226323 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. KLE 1745.;"
putative ABC transporter permease protein
L3_105_000M1_scaffold_1566_14
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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comp(11412..12623)
DNA (1212bp) protein (404aa)
ABC transporter permease protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6MMZ9_9FIRM
ABC transporter permease protein {ECO:0000313|EMBL:CDB87157.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
putative ABC transporter permease protein
L3_105_000M1_scaffold_1566_15
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(12620..14158)
DNA (1539bp) protein (513aa)
ABC transporter ATP-binding protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SH50_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCZ46031.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
putative ABC transporter ATP-binding protein
L3_105_000M1_scaffold_1566_16
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14387..15586)
DNA (1200bp) protein (400aa)
Putative ABC transporter substrate-binding protein n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KWG7_OSCVS
putative ABC transporter substrate-binding protein
Putative ABC transporter substrate-binding protein {ECO:0000313|EMBL:BAL00788.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L3_105_000M1_scaffold_1566_17
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(15767..16492)
DNA (726bp) protein (242aa)
Purine nucleoside phosphorylase DeoD-type {ECO:0000256|HAMAP-Rule:MF_01627}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01627};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01627};; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
Purine nucleoside phosphorylase DeoD-type n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AZN8_9FIRM
deoD; purine nucleoside phosphorylase
L3_105_000M1_scaffold_1566_18
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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16648..17271
DNA (624bp) protein (208aa)
Uridine kinase {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825}; EC=2.7.1.48 {ECO:0000256|HAMAP-Rule:MF_00551, ECO:0000256|RuleBase:RU003825};; Cytidine monophosphokinase {ECO:0000256|HAMAP-Rule:MF_00551}; Uridine monophosphokinase {ECO:0000256|HAMAP-Rule:MF_00551}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
uridine/cytidine kinase (EC:2.7.1.48)
Uridine kinase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B3Z5_9FIRM
L3_105_000M1_scaffold_1566_19
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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17272..17862
DNA (591bp) protein (197aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
thymidine kinase (EC:2.7.1.21)
Thymidine kinase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AS32_9FIRM
L3_105_000M1_scaffold_1566_20
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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17859..18293
DNA (435bp) protein (145aa)
Predicted integral membrane protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AW51_9FIRM
Predicted integral membrane protein {ECO:0000313|EMBL:CCX46194.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
Predicted integral membrane protein
L3_105_000M1_scaffold_1566_21
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(18585..21179)
DNA (2595bp) protein (865aa)
ATP-dependent Clp protease ATP-binding subunit ClpB n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AT85_9FIRM
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
ATP-dependent Clp protease ATP-binding subunit ClpB
L3_105_000M1_scaffold_1566_22
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(21240..21881)
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AZN4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX46192.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein predicted by Glimmer/Critica
L3_105_000M1_scaffold_1566_23
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(22266..23522)
DNA (1257bp) protein (419aa)
Putative voltage-gated chloride channel n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B3Z2_9FIRM
Putative voltage-gated chloride channel {ECO:0000313|EMBL:CCX46191.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
voltage gated chloride channel family
L3_105_000M1_scaffold_1566_24
unknown

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comp(23548..23688)
DNA (141bp) protein (47aa)

This feature has no annotations

Displaying 24 items

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