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L3_105_000M1_scaffold_1737

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_1737_1
unknown

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comp(2..187)
DNA (186bp) protein (62aa)

This feature has no annotations

L3_105_000M1_scaffold_1737_2
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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376..1335
DNA (960bp) protein (320aa)
Resolvase protein n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M565_9FIRM
Resolvase protein {ECO:0000313|EMBL:ERJ94463.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 27760.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_105_000M1_scaffold_1737_3
unknown

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1382..1561
DNA (180bp) protein (60aa)

This feature has no annotations

L3_105_000M1_scaffold_1737_4
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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1669..1920
DNA (252bp) protein (84aa)
Preprotein translocase SecG subunit n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5ATW4_9FIRM
Preprotein translocase SecG subunit {ECO:0000313|EMBL:CCX46800.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
secG; preprotein translocase SecG subunit
L3_105_000M1_scaffold_1737_5
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(1999..2541)
DNA (543bp) protein (181aa)
UPF0340 protein BN455_00218 n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B1D2_9FIRM
UPF0340 protein BN455_00218 {ECO:0000256|HAMAP-Rule:MF_00800}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L3_105_000M1_scaffold_1737_6
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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2668..3696
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AXV8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX46804.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L3_105_000M1_scaffold_1737_7
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

3854..5074
DNA (1221bp) protein (407aa)
Putative cystathionine beta-lyase PatB n=2 Tax=root RepID=R5B5P6_9FIRM
Putative cystathionine beta-lyase PatB {ECO:0000313|EMBL:CCX46806.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities
L3_105_000M1_scaffold_1737_8
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(5134..5466)
DNA (333bp) protein (111aa)
ArsC family protein n=2 Tax=root RepID=R5AUX9_9FIRM
ArsC family protein {ECO:0000313|EMBL:CCX46808.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
Arsenate reductase and related proteins, glutaredoxin family
L3_105_000M1_scaffold_1737_9
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(5480..7138)
DNA (1659bp) protein (553aa)
Metallo-beta-lactamase family protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B5Q1_9FIRM
Metallo-beta-lactamase family protein {ECO:0000313|EMBL:CCX46811.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
ribonuclease J
L3_105_000M1_scaffold_1737_10

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comp(7276..7875)
DNA (600bp) protein (200aa)
Recombination protein RecR n=3 Tax=root RepID=K1TTK6_9ZZZZ
Recombination protein RecR {ECO:0000313|EMBL:EKC73128.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
recR; recombination protein RecR
L3_105_000M1_scaffold_1737_11

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comp(7893..8546)
DNA (654bp) protein (218aa)
Ribulose-phosphate 3-epimerase {ECO:0000313|EMBL:EKC73127.1}; EC=5.1.3.1 {ECO:0000313|EMBL:EKC73127.1};; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
rpe; ribulose-5-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=human gut metagenome RepID=K1TJ57_9ZZZZ
L3_105_000M1_scaffold_1737_12
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

8735..9211
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AXW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX46814.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L3_105_000M1_scaffold_1737_13
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(9286..11355)
DNA (2070bp) protein (690aa)
ATPase P-type (Transporting) HAD superfamily subfamily IC/heavy metal translocating P-type ATPase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5ATX9_9FIRM
ATPase P-type (Transporting) HAD superfamily subfamily IC/heavy metal translocating P-type ATPase {ECO:0000313|EMBL:CCX46815.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
ATPase, P-type (transporting), HAD superfamily, subfamily IC/heavy metal translocating P-type ATPase
L3_105_000M1_scaffold_1737_14
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

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comp(11358..11621)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B5Q5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX46816.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L3_105_000M1_scaffold_1737_15
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(11834..13039)
DNA (1206bp) protein (402aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00009759}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B1E5_9FIRM
L3_105_000M1_scaffold_1737_16
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(13061..13444)
DNA (384bp) protein (128aa)
C_GCAxxG_C_C family protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AUY6_9FIRM
C_GCAxxG_C_C family protein {ECO:0000313|EMBL:CCX46818.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
L3_105_000M1_scaffold_1737_17
Firmicutes bacterium CAG:555, Firmicutes, Bacteria

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comp(13441..15141)
DNA (1701bp) protein (567aa)
DNA repair protein RecN n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5CVG6_9FIRM
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1263030 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:555.;"
recN; DNA repair protein RecN
L3_105_000M1_scaffold_1737_18
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(15165..15614)
DNA (450bp) protein (150aa)
Arginine repressor n=2 Tax=root RepID=R5ATY4_9FIRM
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
argR; arginine repressor
L3_105_000M1_scaffold_1737_19
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(15626..16483)
DNA (858bp) protein (286aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
ppnK; inorganic polyphosphate/ATP-NAD kinase (EC:2.7.1.23)
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B5R1_9FIRM
L3_105_000M1_scaffold_1737_20
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(16480..17298)
DNA (819bp) protein (273aa)
Putative hemolysin n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B1E8_9FIRM
Putative hemolysin {ECO:0000313|EMBL:CCX46822.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
putative hemolysin
L3_105_000M1_scaffold_1737_21
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(17295..19157)
DNA (1863bp) protein (621aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
dxs; 1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AUZ0_9FIRM
L3_105_000M1_scaffold_1737_22
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(19277..20155)
DNA (879bp) protein (293aa)
polyprenyl diphosphate synthase (EC:2.5.1.-)
Geranyltranstransferase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AXX8_9FIRM
Geranyltranstransferase {ECO:0000313|EMBL:CCX46824.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
L3_105_000M1_scaffold_1737_23
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(20159..20392)
DNA (234bp) protein (78aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
xseB; exonuclease VII small subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5ATY8_9FIRM
L3_105_000M1_scaffold_1737_24
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(20367..21596)
DNA (1230bp) protein (410aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
xseA; exonuclease VII large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5B5R5_9FIRM
L3_105_000M1_scaffold_1737_25
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(21598..22137)
DNA (540bp) protein (180aa)
N utilization substance protein B homolog n=2 Tax=root RepID=R5B1F3_9FIRM
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
nusB; antitermination protein NusB
L3_105_000M1_scaffold_1737_26

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comp(22159..22521)
DNA (363bp) protein (121aa)
Alkaline shock protein n=2 Tax=root RepID=R5AUZ4_9FIRM
Protein containing DUF322 {ECO:0000313|EMBL:EKC73185.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_105_000M1_scaffold_1737_27
Firmicutes bacterium CAG:103, Firmicutes, Bacteria

Not on your lists

comp(22659..22988)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AR50_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX45870.1}; TaxID=1262999 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:103.;"
hypothetical protein
Displaying 27 items

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