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L3_105_000M1_scaffold_889

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Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_889_1
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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25..1233
DNA (1209bp) protein (403aa)
Putative site-specific recombinase n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6HNU5_9FIRM
Putative site-specific recombinase {ECO:0000313|EMBL:CDB27547.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
putative site-specific recombinase
L3_105_000M1_scaffold_889_2
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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1663..3147
DNA (1485bp) protein (495aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SMA9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ46042.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L3_105_000M1_scaffold_889_3
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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3218..5359
DNA (2142bp) protein (714aa)
Putative transcription accessory protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SH60_9FIRM
Putative transcription accessory protein {ECO:0000313|EMBL:CCZ46041.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
putative transcription accessory protein
L3_105_000M1_scaffold_889_4
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(5391..5618)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RXX3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ46040.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
L3_105_000M1_scaffold_889_5
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(5669..6595)
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S5H0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ46039.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L3_105_000M1_scaffold_889_6
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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6740..7672
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RZ38_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ46038.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L3_105_000M1_scaffold_889_7
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(7740..8669)
DNA (930bp) protein (310aa)
Putative permease DMT superfamily n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SMA5_9FIRM
Putative permease DMT superfamily {ECO:0000313|EMBL:CCZ46037.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
permease, DMT superfamily
L3_105_000M1_scaffold_889_8
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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8805..9053
DNA (249bp) protein (83aa)
Sporulation transcriptional regulator SpoIIID n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SH55_9FIRM
Sporulation transcriptional regulator SpoIIID {ECO:0000313|EMBL:CCZ46036.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
hypothetical protein
L3_105_000M1_scaffold_889_9
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

9236..10249
DNA (1014bp) protein (338aa)
Putative LytR family regulatory protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RXX0_9FIRM
Putative LytR family regulatory protein {ECO:0000313|EMBL:CCZ46035.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
putative LytR family regulatory protein
L3_105_000M1_scaffold_889_10
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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10270..11751
DNA (1482bp) protein (494aa)
Putative surface layer protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S5G5_9FIRM
Putative surface layer protein {ECO:0000313|EMBL:CCZ46034.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
putative surface layer protein
L3_105_000M1_scaffold_889_11
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(11819..12760)
DNA (942bp) protein (314aa)
Putative ABC transporter permease protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RZ35_9FIRM
Putative ABC transporter permease protein {ECO:0000313|EMBL:CCZ46033.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
putative ABC transporter permease protein
L3_105_000M1_scaffold_889_12
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(12760..13914)
DNA (1155bp) protein (385aa)
Branched-chain amino acid ABC transporter permease protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SMA3_9FIRM
Branched-chain amino acid ABC transporter permease protein {ECO:0000313|EMBL:CCZ46032.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
putative ABC transporter permease protein
L3_105_000M1_scaffold_889_13
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(13911..15449)
DNA (1539bp) protein (513aa)
ABC transporter ATP-binding protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SH50_9FIRM
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCZ46031.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
putative ABC transporter ATP-binding protein
L3_105_000M1_scaffold_889_14
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(15652..16884)
DNA (1233bp) protein (411aa)
Putative ABC transporter substrate-binding protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RXW5_9FIRM
Putative ABC transporter substrate-binding protein {ECO:0000313|EMBL:CCZ46030.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
putative ABC transporter substrate-binding protein
L3_105_000M1_scaffold_889_15
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(17062..17988)
DNA (927bp) protein (309aa)
Uridine kinase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S5G3_9FIRM
Uridine kinase {ECO:0000313|EMBL:CCZ46029.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
Uridine kinase
L3_105_000M1_scaffold_889_16
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(18003..18722)
DNA (720bp) protein (240aa)
Purine nucleoside phosphorylase DeoD-type {ECO:0000256|HAMAP-Rule:MF_01627}; Short=PNP {ECO:0000256|HAMAP-Rule:MF_01627};; EC=2.4.2.1 {ECO:0000256|HAMAP-Rule:MF_01627};; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
deoD; purine nucleoside phosphorylase (EC:2.4.2.1)
Purine nucleoside phosphorylase DeoD-type n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RZ31_9FIRM
L3_105_000M1_scaffold_889_17
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(18726..19409)
DNA (684bp) protein (228aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202};; 2-deoxy-D-ribose 5-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Phosphodeoxyriboaldolase {ECO:0000256|HAMAP-Rule:MF_00114}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
deoC; deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SM96_9FIRM
L3_105_000M1_scaffold_889_18
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(19642..20901)
DNA (1260bp) protein (420aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA C-acetyltransferase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SH45_9FIRM
Acetyl-CoA C-acetyltransferase {ECO:0000313|EMBL:CCZ46026.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
L3_105_000M1_scaffold_889_19
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(21083..22243)
DNA (1161bp) protein (387aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
PPIC-type PPIASE domain protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RXW1_9FIRM
foldase lipoprotein
L3_105_000M1_scaffold_889_20
Oscillibacter sp. 1-3, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22310..25837)
DNA (3528bp) protein (1176aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1235797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter sp. 1-3.;"
mfd; transcription-repair coupling factor (EC:3.6.1.-)
Transcription-repair-coupling factor n=1 Tax=Oscillibacter sp. 1-3 RepID=R9M3L6_9FIRM
L3_105_000M1_scaffold_889_21
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(26052..26645)
DNA (594bp) protein (198aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673};; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
pth; peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SM94_9FIRM
L3_105_000M1_scaffold_889_22
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(26702..27670)
DNA (969bp) protein (323aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosphate {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl diphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; Phosphoribosyl pyrophosphate synthase {ECO:0000256|HAMAP-Rule:MF_00583}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
prs; phosphoribosyl pyrophosphate synthetase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SH38_9FIRM
L3_105_000M1_scaffold_889_23
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(27712..28857)
DNA (1146bp) protein (382aa)
putative glucosamine-1-phosphate N-acetyltransferase (EC:2.3.1.157)
Putative glucosamine-1-phosphate N-acetyltransferase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RXV7_9FIRM
Putative glucosamine-1-phosphate N-acetyltransferase {ECO:0000313|EMBL:CCZ46020.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
L3_105_000M1_scaffold_889_24
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

28982..29578
DNA (597bp) protein (199aa)
Putative tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
Putative tRNA (cytidine(34)-2'-O)-methyltransferase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S5F4_9FIRM
putative RNA methyltransferase
L3_105_000M1_scaffold_889_25
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

29611..30879
DNA (1269bp) protein (423aa)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RZ24_9FIRM
L3_105_000M1_scaffold_889_26
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

31053..31826
DNA (774bp) protein (258aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
tpiA; triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SM91_9FIRM
L3_105_000M1_scaffold_889_27
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

31845..33359
DNA (1515bp) protein (505aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058362}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01038};; Short=iPGM {ECO:0000256|HAMAP-Rule:MF_01038};; EC=5.4.2.12 {ECO:0000256|HAMAP-Rule:MF_01038, ECO:0000256|SAAS:SAAS00058367};; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SH33_9FIRM
L3_105_000M1_scaffold_889_28
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

33430..34710
DNA (1281bp) protein (427aa)
Enolase {ECO:0000256|RuleBase:RU000654}; EC=4.2.1.11 {ECO:0000256|RuleBase:RU000654};; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
eno; phosphopyruvate hydratase (EC:4.2.1.11)
Enolase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S4R4_9FIRM
L3_105_000M1_scaffold_889_29
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

34816..35532
DNA (717bp) protein (239aa)
Putative metalloendopeptidase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RXB8_9FIRM
Putative metalloendopeptidase {ECO:0000313|EMBL:CCZ45860.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
putative metalloendopeptidase
L3_105_000M1_scaffold_889_30
[Ruminococcus] torques, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(35605..37125)
DNA (1521bp) protein (507aa)
SSS sodium solute transporter superfamily n=1 Tax=Ruminococcus torques L2-14 RepID=D4M0S9_9FIRM
SSS sodium solute transporter superfamily
SSS sodium solute transporter superfamily {ECO:0000313|EMBL:CBL24841.1}; TaxID=657313 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus torques L2-14.;"
Displaying items 1-30 of 31 in total

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