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L3_105_000M1_scaffold_939

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_939_1
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..713
DNA (711bp) protein (237aa)
Thioredoxin-disulfide reductase {ECO:0000313|EMBL:EEG74554.1}; EC=1.8.1.9 {ECO:0000313|EMBL:EEG74554.1};; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
thioredoxin-disulfide reductase (EC:1.8.1.9)
Thioredoxin-disulfide reductase n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0BZH6_9CLOT
L3_105_000M1_scaffold_939_2
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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761..1276
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6PFA5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC17191.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
hypothetical protein
L3_105_000M1_scaffold_939_3
unknown

Not on your lists

comp(1093..2070)
DNA (978bp) protein (326aa)

This feature has no annotations

L3_105_000M1_scaffold_939_4
Oscillibacter sp. CAG:241, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2467..3936)
DNA (1470bp) protein (490aa)
MATE efflux family protein n=1 Tax=Oscillibacter sp. CAG:241 RepID=R6GUN8_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:CDB24981.1}; TaxID=1262911 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:241.;"
Na+-driven multidrug efflux pump
L3_105_000M1_scaffold_939_5
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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4149..5336
DNA (1188bp) protein (396aa)
Ser/Thr phosphatase family protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SPT1_9FIRM
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:CCZ46932.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
Predicted phosphohydrolases
L3_105_000M1_scaffold_939_6
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(5376..6242)
DNA (867bp) protein (289aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SJP5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ46931.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
putative permease
L3_105_000M1_scaffold_939_7
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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6441..6995
DNA (555bp) protein (185aa)
Sigma-70 region 4 n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5S0C1_9FIRM
Sigma-70 region 4 {ECO:0000313|EMBL:CCZ46930.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
RNA polymerase sigma-70 factor, ECF subfamily protein
L3_105_000M1_scaffold_939_8
unknown

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6992..8212
DNA (1221bp) protein (407aa)

This feature has no annotations

L3_105_000M1_scaffold_939_9
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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comp(8282..8467)
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5SKF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ45422.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
L3_105_000M1_scaffold_939_10
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

Not on your lists

comp(8484..9059)
DNA (576bp) protein (192aa)
5'-nucleotidase YfbR (EC:3.1.3.5)
5'-nucleotidase YfbR (Nucleoside 5'-monophosphatephosphohydrolase) (5'-deoxyribonucleotidase) n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RXA3_9FIRM
5'-nucleotidase YfbR (Nucleoside 5'-monophosphatephosphohydrolase) (5'-deoxyribonucleotidase) {ECO:0000313|EMBL:CCZ45423.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
L3_105_000M1_scaffold_939_11
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(9056..10345)
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D4Y3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX75243.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
hypothetical protein
L3_105_000M1_scaffold_939_12
Firmicutes bacterium CAG:129, Firmicutes, Bacteria

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10434..11567
DNA (1134bp) protein (378aa)
Cysteine desulfurase n=1 Tax=Firmicutes bacterium CAG:129 RepID=R5RW82_9FIRM
Cysteine desulfurase {ECO:0000313|EMBL:CCZ45495.1}; TaxID=1263003 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:129.;"
iscS; cysteine desulfurase
L3_105_000M1_scaffold_939_13
Oscillibacter sp. CAG:155, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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11589..12971
DNA (1383bp) protein (461aa)
MatE efflux family protein n=1 Tax=Oscillibacter sp. CAG:155 RepID=R6TK18_9FIRM
MatE efflux family protein {ECO:0000313|EMBL:CDC68196.1}; TaxID=1262910 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter; environmental samples.;" source="Oscillibacter sp. CAG:155.;"
MatE efflux family protein
L3_105_000M1_scaffold_939_14
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(13009..13524)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DET0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX74411.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
L3_105_000M1_scaffold_939_15
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(13521..13826)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D2I7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX74413.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
L3_105_000M1_scaffold_939_16
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(13823..14455)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D6H6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX74414.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
L3_105_000M1_scaffold_939_17
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(14478..20864)
DNA (6387bp) protein (2129aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DET6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX74416.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
L3_105_000M1_scaffold_939_18
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

Not on your lists

comp(20886..21428)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DB81_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81441.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
hypothetical protein
L3_105_000M1_scaffold_939_19
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(21425..22045)
DNA (621bp) protein (207aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DU33_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA81442.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
L3_105_000M1_scaffold_939_20
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(22042..23061)
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DFF8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX74626.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
FtsA; putative ATPase of the HSP70 class involved in cell division
L3_105_000M1_scaffold_939_21
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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comp(23100..23891)
DNA (792bp) protein (264aa)
Type 4 prepilin-like proteins leader peptide-processing enzyme {ECO:0000256|RuleBase:RU003794}; EC=2.1.1.- {ECO:0000256|RuleBase:RU003794};; EC=3.4.23.43 {ECO:0000256|RuleBase:RU003794};; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
Type II secretory pathway, prepilin signal peptidase PulO and related peptidases (EC:2.1.1.- 3.4.23.43)
Type 4 prepilin-like proteins leader peptide-processing enzyme n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D317_9FIRM
L3_105_000M1_scaffold_939_22
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

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comp(24091..24426)
DNA (336bp) protein (112aa)
Prepilin-type cleavage/methylation N-terminal domain protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D730_9FIRM
Prepilin-type cleavage/methylation N-terminal domain protein {ECO:0000313|EMBL:CCX74624.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
prepilin-type N-terminal cleavage/methylation domain
L3_105_000M1_scaffold_939_23
Firmicutes bacterium CAG:176, Firmicutes, Bacteria

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comp(24496..25704)
DNA (1209bp) protein (403aa)
Type II secretion system protein F n=1 Tax=Firmicutes bacterium CAG:176 RepID=R6DTH9_9FIRM
Type II secretion system protein F {ECO:0000313|EMBL:CDA81242.1}; TaxID=1263007 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:176.;"
HofF; general secretory pathway protein F
L3_105_000M1_scaffold_939_24
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

comp(25740..27434)
DNA (1695bp) protein (565aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5DCP0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX74622.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB
L3_105_000M1_scaffold_939_25
Eubacterium sp. CAG:274, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27739..29439)
DNA (1701bp) protein (567aa)
Site-specific recombinases DNA invertase Pin homologs n=1 Tax=Eubacterium sp. CAG:274 RepID=R6PA30_9FIRM
Site-specific recombinases DNA invertase Pin homologs {ECO:0000313|EMBL:CDC20350.1}; TaxID=1262888 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:274.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_105_000M1_scaffold_939_26
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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comp(29727..30707)
DNA (981bp) protein (327aa)
Plasmid recombination enzyme n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R5Y6_9FIRM
Plasmid recombination enzyme {ECO:0000313|EMBL:CCZ35988.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Plasmid recombination enzyme.
L3_105_000M1_scaffold_939_27
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30707..30922)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:138 RepID=R6AXD9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA51276.1}; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
hypothetical protein
L3_105_000M1_scaffold_939_28
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31363..32682)
DNA (1320bp) protein (440aa)
Phage/plasmid primase, P4 family domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EWU1_9FIRM
Phage/plasmid primase, P4 family domain protein {ECO:0000313|EMBL:EEQ62485.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
phage/plasmid primase
L3_105_000M1_scaffold_939_29
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32648..33280)
DNA (633bp) protein (211aa)
CHC2 zinc finger domain protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EWU2_9FIRM
CHC2 zinc finger domain protein {ECO:0000313|EMBL:EEQ62486.1}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
DNA primase (bacterial type)
L3_105_000M1_scaffold_939_30
Clostridium sp. CAG:138, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33510..33707
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:138 RepID=R6ARB6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA51279.1}; TaxID=1262775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:138.;"
hypothetical protein
Displaying items 1-30 of 36 in total

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