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L3_105_000M1_scaffold_5611

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_5611_1
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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582..1277
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6XWT0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD10727.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
L3_105_000M1_scaffold_5611_2
unknown

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1301..1498
DNA (198bp) protein (66aa)

This feature has no annotations

L3_105_000M1_scaffold_5611_3
Eubacterium siraeum CAG:80, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1587..2027)
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Eubacterium siraeum CAG:80 RepID=R6R6J2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC43520.1}; TaxID=1263080 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium siraeum CAG:80.;"
hypothetical protein
L3_105_000M1_scaffold_5611_4
unknown

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2301..3251
DNA (951bp) protein (317aa)

This feature has no annotations

L3_105_000M1_scaffold_5611_5
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3548..3952)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WHY7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD10723.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
L3_105_000M1_scaffold_5611_6
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3956..4876)
DNA (921bp) protein (307aa)
Predicted permease DMT superfamily n=1 Tax=Clostridium sp. CAG:349 RepID=R6X386_9CLOT
Predicted permease DMT superfamily {ECO:0000313|EMBL:CDD10721.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
Predicted permease, DMT superfamily
L3_105_000M1_scaffold_5611_7
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5311..7002
DNA (1692bp) protein (564aa)
Alpha amylase catalytic region n=1 Tax=Clostridium sp. CAG:349 RepID=R6XWR5_9CLOT
Alpha amylase catalytic region {ECO:0000313|EMBL:CDD10712.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
alpha amylase catalytic subunit
L3_105_000M1_scaffold_5611_8
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7117..7647
DNA (531bp) protein (177aa)
ECF subfamily RNA polymerase sigma-70 factor (EC:2.7.7.6)
RNA polymerase sigma-70 factor ECF subfamily n=1 Tax=Clostridium sp. CAG:349 RepID=R6X376_9CLOT
RNA polymerase sigma-70 factor ECF subfamily {ECO:0000313|EMBL:CDD10711.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
L3_105_000M1_scaffold_5611_9
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7637..8659
DNA (1023bp) protein (341aa)
Hypothetical surface-anchored protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WMQ5_9CLOT
Hypothetical surface-anchored protein {ECO:0000313|EMBL:CDD10710.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
membrane associated protein
L3_105_000M1_scaffold_5611_10
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8735..9655
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WUV8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD10709.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
hypothetical protein
L3_105_000M1_scaffold_5611_11
Prevotella sp. CAG:873, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9903..13511
DNA (3609bp) protein (1203aa)
Ig-like domain-containing surface protein n=1 Tax=Prevotella sp. CAG:873 RepID=R7J0T7_9BACT
Ig-like domain-containing surface protein
Ig-like domain-containing surface protein {ECO:0000313|EMBL:CDE57391.1}; TaxID=1262936 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:873.;"
Displaying 11 items

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