ggKbase home page

L3_105_000M1_scaffold_860_15

Organism: dasL3_105_000M1_metabat_metabat_97_fa_fa

near complete RP 46 / 55 BSCG 50 / 51 MC: 1 ASCG 11 / 38 MC: 1
Location: comp(17084..17347)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6XR80_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 95.4
  • Coverage: 87.0
  • Bit_score: 171
  • Evalue 2.80e-40
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDD08827.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.4
  • Coverage: 87.0
  • Bit_score: 171
  • Evalue 3.90e-40
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 42.4
  • Coverage: 59.0
  • Bit_score: 57
  • Evalue 1.60e-06

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. CAG:349 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 264
ATGTTATTCGGTCGTTTACTTAAACAAATCAGAAAAAGAAAAGGCTATACCAGCCAACAACTTGCCGACGCTTTGCACGTCTCCCGCAGCACTTACAGCCGCTACGAAAACGACTTAAAGGACGTGGAGCCCGACATACTTTTGGGCCTTGCGAATTTTTACGACACCACGGTCGACGACTTCCTGCTCTGGAACGCGCTTATCAAGTCGCCCGATTATCCGATGAACGTCAACAAATTAAGGCGACTTGGAAAATTAAAATAA
PROTEIN sequence
Length: 88
MLFGRLLKQIRKRKGYTSQQLADALHVSRSTYSRYENDLKDVEPDILLGLANFYDTTVDDFLLWNALIKSPDYPMNVNKLRRLGKLK*