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L3_105_000M1_scaffold_860

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_860_1
Anaerotruncus sp. CAG:390, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

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265..1512
DNA (1248bp) protein (416aa)
Surface antigen BspA-like n=1 Tax=Anaerotruncus sp. CAG:390 RepID=R7ET74_9FIRM
Surface antigen BspA-like {ECO:0000313|EMBL:CDE05810.1}; TaxID=1262703 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus; environmental samples.;" source="Anaerotruncus sp. CAG:390.;"
cell surface protein
L3_105_000M1_scaffold_860_2
unknown

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2309..2560
DNA (252bp) protein (84aa)

This feature has no annotations

L3_105_000M1_scaffold_860_3
Faecalibacterium sp. CAG:1138, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2652..4619
DNA (1968bp) protein (656aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:1138 RepID=R5FFP1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY03850.1}; TaxID=1262896 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:1138.;"
hypothetical protein
L3_105_000M1_scaffold_860_4
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4628..5332)
DNA (705bp) protein (235aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|SAAS:SAAS00018068}; EC=1.17.1.8 {ECO:0000256|SAAS:SAAS00018030};; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
dapB; 4-hydroxy-tetrahydrodipicolinate reductase (EC:1.17.1.8)
Dihydrodipicolinate reductase n=1 Tax=Clostridium sp. CAG:349 RepID=R6WXN7_9CLOT
L3_105_000M1_scaffold_860_5
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5336..6208)
DNA (873bp) protein (291aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421};; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Clostridium sp. CAG:349 RepID=R6XR69_9CLOT
Dihydrodipicolinate synthase
L3_105_000M1_scaffold_860_6
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6275..7276)
DNA (1002bp) protein (334aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:0000256|HAMAP-Rule:MF_02121};; Aspartate-beta-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
aspartate semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=1 Tax=Clostridium sp. CAG:349 RepID=R6WCH9_9CLOT
L3_105_000M1_scaffold_860_7
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7484..8578
DNA (1095bp) protein (365aa)
Putative integral membrane protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WPH5_9CLOT
Putative integral membrane protein {ECO:0000313|EMBL:CDD08819.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
L3_105_000M1_scaffold_860_8
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8579..9292
DNA (714bp) protein (238aa)
Methyltransferase n=1 Tax=Clostridium sp. CAG:349 RepID=R6WHB6_9CLOT
Methyltransferase {ECO:0000313|EMBL:CDD08820.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
S-adenosylmethionine-dependent methyltransferase
L3_105_000M1_scaffold_860_9
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9292..10161
DNA (870bp) protein (290aa)
33 kDa chaperonin n=1 Tax=Clostridium sp. CAG:349 RepID=R6WXP4_9CLOT
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
Hsp33 protein
L3_105_000M1_scaffold_860_10
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10179..12092
DNA (1914bp) protein (638aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6XR75_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD08822.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
L3_105_000M1_scaffold_860_11
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12082..12936
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WCI3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD08823.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
L3_105_000M1_scaffold_860_12
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12992..13969
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WPI0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD08824.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
L3_105_000M1_scaffold_860_13
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14037..15497
DNA (1461bp) protein (487aa)
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPDH {ECO:0000256|HAMAP-Rule:MF_01964};; EC=1.1.1.205 {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928};; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Clostridium sp. CAG:349 RepID=R6WHC1_9CLOT
L3_105_000M1_scaffold_860_14
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15509..17092
DNA (1584bp) protein (528aa)
GTPase HflX n=1 Tax=Clostridium sp. CAG:349 RepID=R6WXQ0_9CLOT
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
GTP-binding proten HflX
L3_105_000M1_scaffold_860_15
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17084..17347)
DNA (264bp) protein (88aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6XR80_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDD08827.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
helix-turn-helix domain-containing protein
L3_105_000M1_scaffold_860_16
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(17398..18798)
DNA (1401bp) protein (467aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00253}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
glycyl-tRNA synthetase (EC:6.1.1.14)
Glycine--tRNA ligase n=1 Tax=Clostridium sp. CAG:349 RepID=R6WCI7_9CLOT
L3_105_000M1_scaffold_860_17
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19198..19668)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WHC5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD08830.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
L3_105_000M1_scaffold_860_18
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19776..20561
DNA (786bp) protein (262aa)
Type III pantothenate kinase {ECO:0000256|HAMAP-Rule:MF_01274}; EC=2.7.1.33 {ECO:0000256|HAMAP-Rule:MF_01274};; PanK-III {ECO:0000256|HAMAP-Rule:MF_01274}; Pantothenic acid kinase {ECO:0000256|HAMAP-Rule:MF_01274}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
Type III pantothenate kinase n=1 Tax=Clostridium sp. CAG:349 RepID=R6WXQ6_9CLOT
pantothenate kinase
L3_105_000M1_scaffold_860_19
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20558..21838
DNA (1281bp) protein (427aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
hom; homoserine dehydrogenase Hom (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=Clostridium sp. CAG:349 RepID=R6XR88_9CLOT
L3_105_000M1_scaffold_860_20
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21838..22053
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WCJ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD08833.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
L3_105_000M1_scaffold_860_21
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22166..23812)
DNA (1647bp) protein (549aa)
Acyl-CoA synthetase/AMP-acid ligase n=1 Tax=Clostridium sp. CAG:349 RepID=R6WPI7_9CLOT
Acyl-CoA synthetase/AMP-acid ligase {ECO:0000313|EMBL:CDD08834.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
acyl-CoA synthetase/AMP-acid ligase
L3_105_000M1_scaffold_860_22
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23976..24416
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WHD1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD08835.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
L3_105_000M1_scaffold_860_23
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24427..24834
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WXR2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD08836.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
L3_105_000M1_scaffold_860_24
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24834..26795
DNA (1962bp) protein (654aa)
UvrABC system protein B n=1 Tax=Clostridium sp. CAG:349 RepID=R6XR93_9CLOT
UvrABC system protein B {ECO:0000256|HAMAP-Rule:MF_00204, ECO:0000256|RuleBase:RU003587}; Short=Protein UvrB {ECO:0000256|HAMAP-Rule:MF_00204};; Excinuclease ABC subunit B {ECO:0000256|HAMAP-Rule:MF_00204}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
excinuclease ABC subunit B
L3_105_000M1_scaffold_860_25
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26801..29626
DNA (2826bp) protein (942aa)
UvrABC system protein A n=1 Tax=Clostridium sp. CAG:349 RepID=R6WCJ8_9CLOT
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_00205}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
UvrABC system protein A
L3_105_000M1_scaffold_860_26
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29696..30076)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WPJ2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD08839.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
L3_105_000M1_scaffold_860_27
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30073..30774)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WHD5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD08840.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
protein of unknown function DUF421
L3_105_000M1_scaffold_860_28
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30999..31604
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WXR7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD08841.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
hypothetical protein
L3_105_000M1_scaffold_860_29
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31540..33063)
DNA (1524bp) protein (508aa)
Putative stage V sporulation protein B n=1 Tax=Clostridium sp. CAG:349 RepID=R6XR99_9CLOT
Putative stage V sporulation protein B {ECO:0000313|EMBL:CDD08842.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
polysaccharide biosynthesis protein
L3_105_000M1_scaffold_860_30
Clostridium sp. CAG:349, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33053..33346)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:349 RepID=R6WCK5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDD08843.1}; TaxID=1262797 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:349.;"
Displaying items 1-30 of 35 in total

View Taxonomy