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L3_105_000M1_scaffold_183

Search features with annotation key words

Displaying items 1-30 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_183_1
Bacteroides sp. CAG:98, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

560..3361
DNA (2802bp) protein (934aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00036C378D
Uncharacterized protein {ECO:0000313|EMBL:CDF14609.1}; TaxID=1262754 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:98.;"
TonB-dependent receptor
L3_105_000M1_scaffold_183_2
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

3389..5089
DNA (1701bp) protein (567aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002E5A8B3
Membrane protein {ECO:0000313|EMBL:ETZ21503.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
RagB/SusD domain-containing protein
L3_105_000M1_scaffold_183_3
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5197..8322
DNA (3126bp) protein (1042aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003062408
hypothetical protein
Tax=GWA2_Bacteroidetes_40_15_curated
L3_105_000M1_scaffold_183_4
Odoribacter splanchnicus CAG:14, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8560..10173
DNA (1614bp) protein (538aa)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}; EC=1.1.5.3 {ECO:0000256|RuleBase:RU361217};; TaxID=1263090 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter splanchnicus CAG:14.;"
glycerol-3-phosphate dehydrogenase, anaerobic, A subunit (EC:1.1.5.3)
sn-glycerol-3-phosphate dehydrogenase subunit A n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000375614D
L3_105_000M1_scaffold_183_5
Odoribacter laneus CAG:561, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10178..11434
DNA (1257bp) protein (419aa)
Anaerobic glycerol-3-phosphate dehydrogenase subunit B (EC:1.1.5.3)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002E3C821
Anaerobic glycerol-3-phosphate dehydrogenase subunit B {ECO:0000313|EMBL:CCZ79983.1}; TaxID=1263089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter laneus CAG:561.;"
L3_105_000M1_scaffold_183_6
Odoribacter laneus, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11442..12656
DNA (1215bp) protein (405aa)
sn-glycerol-3-phosphate dehydrogenase subunit C n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002DEB61D
Glycerol-3-phosphate dehydrogenase, anaerobic, C subunit {ECO:0000313|EMBL:EHP45377.1}; TaxID=742817 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter.;" source="Odoribacter laneus YIT 12061.;"
glycerol-3-phosphate dehydrogenase, anaerobic, C subunit
L3_105_000M1_scaffold_183_7
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12950..13924
DNA (975bp) protein (325aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000377F20F
Sigma factor regulatory protein, FecR/PupR family {ECO:0000313|EMBL:EFR58877.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Fe2+-dicitrate sensor membrane protein
L3_105_000M1_scaffold_183_8
Alistipes sp. CAG:435, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14058..17591
DNA (3534bp) protein (1178aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00037FA800
TonB-linked outer membrane protein SusC/RagA family {ECO:0000313|EMBL:CDD15902.1}; TaxID=1262695 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:435.;"
SusC/RagA family TonB-linked outer membrane protein
L3_105_000M1_scaffold_183_9
Bacteroides sp. CAG:545, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17591..19117
DNA (1527bp) protein (509aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000372AEC9
RagB/SusD family protein {ECO:0000313|EMBL:CCZ44225.1}; TaxID=1262742 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:545.;"
RagB/SusD family protein
L3_105_000M1_scaffold_183_10
Alistipes sp. CAG:435, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19143..21284
DNA (2142bp) protein (714aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00030A81F7
Uncharacterized protein {ECO:0000313|EMBL:CDD15898.1}; TaxID=1262695 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:435.;"
hypothetical protein
L3_105_000M1_scaffold_183_11
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21393..22292
DNA (900bp) protein (300aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003704F7A
Glycerophosphodiester phosphodiesterase family protein {ECO:0000313|EMBL:EFR57805.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
glycerophosphoryl diester phosphodiesterase
L3_105_000M1_scaffold_183_12
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22376..23206
DNA (831bp) protein (277aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000310962C
S1/P1 Nuclease
S1/P1 Nuclease {ECO:0000313|EMBL:AFL78341.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_105_000M1_scaffold_183_13
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23363..23959)
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00037974C0
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1
Uncharacterized protein {ECO:0000313|EMBL:EGN03353.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
L3_105_000M1_scaffold_183_14
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(24704..26050)
DNA (1347bp) protein (449aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002D36E2D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT95985.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
L3_105_000M1_scaffold_183_15
Odoribacter splanchnicus CAG:14, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26093..27025)
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00036AAB04
Uncharacterized protein {ECO:0000313|EMBL:CDB07080.1}; TaxID=1263090 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odoribacter splanchnicus CAG:14.;"
hypothetical protein
L3_105_000M1_scaffold_183_16
Bacteroides sp. 1_1_30, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27051..28736)
DNA (1686bp) protein (562aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002EA3071
Uncharacterized protein {ECO:0000313|EMBL:EGN08336.1}; TaxID=457387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_30.;"
RagB/SusD domain-containing protein
L3_105_000M1_scaffold_183_17
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28763..32086)
DNA (3324bp) protein (1108aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00035D7D62
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EEZ05746.1}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
TonB-dependent receptor plug
L3_105_000M1_scaffold_183_18
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32491..33117)
DNA (627bp) protein (209aa)
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002E826C9
L3_105_000M1_scaffold_183_19
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33131..33640)
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002FBC382
Thiol-disulfide isomerase and thioredoxins
Thiol-disulfide isomerase and thioredoxins {ECO:0000313|EMBL:CBK64720.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_105_000M1_scaffold_183_20
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33666..34721)
DNA (1056bp) protein (352aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002F8CD27
Thiol-disulfide isomerase and thioredoxins
Thiol-disulfide isomerase and thioredoxins {ECO:0000313|EMBL:CBK64720.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_105_000M1_scaffold_183_21
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34783..35838)
DNA (1056bp) protein (352aa)
Antioxidant, AhpC/TSA family {ECO:0000313|EMBL:EFR57472.1}; EC=1.11.1.15 {ECO:0000313|EMBL:EFR57472.1};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003140569
thiol-disulfide isomerase-like thioredoxin
L3_105_000M1_scaffold_183_22
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35841..36878)
DNA (1038bp) protein (346aa)
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC:2.3.1.-)
UDP-3-O-acylglucosamine N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_00523}; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_00523, ECO:0000313|EMBL:CBK64721.1};; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003739D98
L3_105_000M1_scaffold_183_23
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36908..37375)
DNA (468bp) protein (156aa)
Phosphopantetheine adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109024}; EC=2.7.7.3 {ECO:0000256|HAMAP-Rule:MF_00151, ECO:0000256|SAAS:SAAS00109037};; Dephospho-CoA pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00151}; Pantetheine-phosphate adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00151}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
pantetheine-phosphate adenylyltransferase (EC:2.7.7.3)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00031D9849
L3_105_000M1_scaffold_183_24
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37686..38306)
DNA (621bp) protein (207aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003747AD3
Uncharacterized protein {ECO:0000313|EMBL:CDD25713.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_105_000M1_scaffold_183_25
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38428..39192)
DNA (765bp) protein (255aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002D7D32E
branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase {ECO:0000313|EMBL:AFL76838.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_105_000M1_scaffold_183_26
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39205..40275)
DNA (1071bp) protein (357aa)
DNA polymerase III subunit delta (EC:2.7.7.7)
DNA polymerase III, delta subunit {ECO:0000313|EMBL:EFR57497.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EFR57497.1};; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
DNA polymerase III subunit delta n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002ED9661
L3_105_000M1_scaffold_183_27
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(40278..41618)
DNA (1341bp) protein (447aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine synthetase {ECO:0000256|HAMAP-Rule:MF_01161}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
tRNA(Ile)-lysidine synthase n=1 Tax=Alistipes sp. CAG:268 RepID=R6VKL9_9BACT
tRNA(Ile)-lysidine synthetase
L3_105_000M1_scaffold_183_28
unknown

Not on your lists

comp(41631..41771)
DNA (141bp) protein (47aa)

This feature has no annotations

L3_105_000M1_scaffold_183_29
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41787..42794)
DNA (1008bp) protein (336aa)
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000316962A
L3_105_000M1_scaffold_183_30
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

43053..44486
DNA (1434bp) protein (478aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002F569F6
Uncharacterized protein {ECO:0000313|EMBL:CDD25718.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
Displaying items 1-30 of 74 in total

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