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L3_105_000M1_scaffold_521

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_000M1_scaffold_521_1
Bacteroides sp. 3_1_23, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..859
DNA (858bp) protein (286aa)
hypothetical protein, partial n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003792124
Putative TonB-dependent receptor plug domain protein {ECO:0000313|EMBL:EFI37253.1}; TaxID=457390 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_23.;"
TonB-dependent Receptor Plug Domain.
L3_105_000M1_scaffold_521_2
Alistipes finegoldii CAG:68, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1164..1457)
DNA (294bp) protein (98aa)
50S ribosomal protein L20 n=1 Tax=Alistipes finegoldii CAG:68 RepID=R5UGF2_9BACT
50S ribosomal protein L20 {ECO:0000256|RuleBase:RU000560}; TaxID=1263035 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes finegoldii CAG:68.;"
50S ribosomal protein L20
L3_105_000M1_scaffold_521_3
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(1608..1802)
DNA (195bp) protein (65aa)
50S ribosomal protein L35 n=6 Tax=Alistipes RepID=D4ILS3_9BACT
50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_105_000M1_scaffold_521_4
Bacteroides caccae CAG:21, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2279..2959
DNA (681bp) protein (227aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00037EC0DA
Uncharacterized protein {ECO:0000313|EMBL:CCZ74433.1}; TaxID=1263037 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides caccae CAG:21.;"
hypothetical protein
L3_105_000M1_scaffold_521_5
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3001..3666
DNA (666bp) protein (222aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00037B0256
Uncharacterized membrane protein
Uncharacterized membrane protein {ECO:0000313|EMBL:CCZ97339.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L3_105_000M1_scaffold_521_6
Bacteroides eggerthii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3796..5169)
DNA (1374bp) protein (458aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000301CC26
Uncharacterized protein {ECO:0000313|EMBL:EFV30802.1}; TaxID=665953 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides eggerthii 1_2_48FAA.;"
hypothetical protein
L3_105_000M1_scaffold_521_7
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5448..6389)
DNA (942bp) protein (314aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
ribose-phosphate pyrophosphokinase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000309C278
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:CDE63218.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
L3_105_000M1_scaffold_521_8
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6463..7059)
DNA (597bp) protein (199aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003697B74
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
ribosome biogenesis GTP-binding protein YsxC/EngB
L3_105_000M1_scaffold_521_9
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7315..7716)
DNA (402bp) protein (134aa)
Cof n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003816617
Uncharacterized protein {ECO:0000313|EMBL:CDE63216.1}; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein
L3_105_000M1_scaffold_521_10
Alistipes sp. CAG:157, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8038..9882
DNA (1845bp) protein (615aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; GFAT {ECO:0000256|HAMAP-Rule:MF_00164}; Glucosamine-6-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00164}; Hexosephosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; L-glutamine--D-fructose-6-phosphate amidotransferase {ECO:0000256|HAMAP-Rule:MF_00164}; TaxID=1262692 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:157.;"
Glucosamine--fructose-6-phosphate aminotransferase (isomerizing) (EC:2.6.1.16)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002FC6CEF
L3_105_000M1_scaffold_521_11
unknown

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10013..10510
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00036AFC75
L3_105_000M1_scaffold_521_12
unknown

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11060..11374
DNA (315bp) protein (105aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0003692660
L3_105_000M1_scaffold_521_13
unknown

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comp(11565..12806)
DNA (1242bp) protein (414aa)

This feature has no annotations

L3_105_000M1_scaffold_521_14
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12927..14027)
DNA (1101bp) protein (367aa)
2-nitropropane dioxygenase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00037C49BF
2-nitropropane dioxygenase-like enzyme {ECO:0000313|EMBL:CDC98204.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
2-nitropropane dioxygenase
L3_105_000M1_scaffold_521_15
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(14351..15376)
DNA (1026bp) protein (342aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00195365}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
O-sialoglycoprotein endopeptidase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00031958A1
glycoprotease GCP
L3_105_000M1_scaffold_521_16
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15449..20077
DNA (4629bp) protein (1543aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00037D9E8D
Uncharacterized protein {ECO:0000313|EMBL:CDD25416.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
hypothetical protein
L3_105_000M1_scaffold_521_17
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20091..20762
DNA (672bp) protein (224aa)
biopolymer transporter ExbB n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000377BDE6
Biopolymer transport protein {ECO:0000313|EMBL:CDC95834.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
biopolymer transport protein
L3_105_000M1_scaffold_521_18
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20769..21170
DNA (402bp) protein (134aa)
biopolymer transporter ExbD n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000311E10A
Biopolymer transport protein
Biopolymer transport protein {ECO:0000313|EMBL:CCZ96167.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L3_105_000M1_scaffold_521_19
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21181..21864
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002FE9B40
TonB family protein {ECO:0000313|EMBL:CDC95839.1}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
TonB family protein
L3_105_000M1_scaffold_521_20
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21867..22382
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00037BB991
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL76452.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_105_000M1_scaffold_521_21
Alistipes putredinis CAG:67, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22379..23686
DNA (1308bp) protein (436aa)
5-methylthioadenosine/S-adenosylhomocysteine deaminase {ECO:0000256|HAMAP-Rule:MF_01281}; Short=MTA/SAH deaminase {ECO:0000256|HAMAP-Rule:MF_01281};; EC=3.5.4.28 {ECO:0000256|HAMAP-Rule:MF_01281};; EC=3.5.4.31 {ECO:0000256|HAMAP-Rule:MF_01281};; TaxID=1263036 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes putredinis CAG:67.;"
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00037E4CF3
cytosine deaminase
L3_105_000M1_scaffold_521_22
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23747..24493)
DNA (747bp) protein (249aa)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=Phosphoglyceromutase {ECO:0000256|HAMAP-Rule:MF_01039};; Short=dPGM {ECO:0000256|HAMAP-Rule:MF_01039};; EC=5.4.2.11 {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
phosphoglyceromutase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002E77E35
gpmA; phosphoglyceromutase
L3_105_000M1_scaffold_521_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24504..25556)
DNA (1053bp) protein (351aa)
fbaB; putative fructose-bisphosphate aldolase class I (EC:4.1.2.13)
fructose-bisphosphate aldolase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002DBF7AA
Uncharacterized protein {ECO:0000313|EMBL:EKA85542.1}; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
L3_105_000M1_scaffold_521_24
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25961..26926)
DNA (966bp) protein (322aa)
KpsF/GutQ family protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00031AEC3A
Sugar isomerase, KpsF/GutQ family {ECO:0000313|EMBL:EDS03557.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
KpsF/GutQ family protein
L3_105_000M1_scaffold_521_25
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26926..27678)
DNA (753bp) protein (251aa)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|SAAS:SAAS00078538};; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002ED1F4F
3-deoxy-7-phosphoheptulonate synthase
L3_105_000M1_scaffold_521_26
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27786..28553)
DNA (768bp) protein (256aa)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-keto-3-deoxyoctulosonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00057}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
3-deoxy-D-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002D2E3C2
L3_105_000M1_scaffold_521_27
Alistipes sp. CAG:268, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28624..31059)
DNA (2436bp) protein (812aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HAMAP-Rule:MF_01973}; TaxID=1262693 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:268.;"
Lon protease n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002E1283E
ATP-dependent protease La
L3_105_000M1_scaffold_521_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31417..31986)
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI000300F802
Uncharacterized protein {ECO:0000313|EMBL:EXY67034.1}; TaxID=1339289 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3986 N(B)19.;"
hypothetical protein
L3_105_000M1_scaffold_521_29
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


32273..34903
DNA (2631bp) protein (877aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02004}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
valyl-tRNA synthetase (EC:6.1.1.9)
valyl-tRNA synthetase n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002EEBA28
L3_105_000M1_scaffold_521_30
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35158..35622
DNA (465bp) protein (155aa)
ribonuclease HI (EC:3.1.26.4)
ribonuclease HI n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002DB5A22
Ribonuclease HI {ECO:0000313|EMBL:CDD24979.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Displaying items 1-30 of 47 in total

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