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L3_105_085G1_scaffold_40

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Displaying items 1-30 of 170 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_085G1_scaffold_40_1
Lactobacillus paracasei, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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2..133
DNA (132bp) protein (44aa)
Uncharacterized protein n=5 Tax=Lactobacillus casei group RepID=K6QUU7_LACCA
Uncharacterized protein {ECO:0000313|EMBL:EPC28658.1}; TaxID=1256221 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus paracasei subsp. paracasei Lpp22.;"
L3_105_085G1_scaffold_40_2
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

204..725
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Lactobacillus rhamnosus LOCK908 RepID=S5A1W9_LACRH
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP73043.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_105_085G1_scaffold_40_3
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1104..1670
DNA (567bp) protein (189aa)
ABC transporter, cobalt transporter permease component n=4 Tax=Lactobacillus rhamnosus RepID=C7TG57_LACRL
cobalt ABC transporter permease
Cobalt ABC transporter permease {ECO:0000313|EMBL:KIC96676.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_105_085G1_scaffold_40_4
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

1677..3020
DNA (1344bp) protein (448aa)
ABC transporter, cobalt transporter ATPase component n=4 Tax=Lactobacillus rhamnosus RepID=C7TG58_LACRL
cbiO; ABC transporter, cobalt transporter ATPase component domain protein
Duplicated ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine {ECO:0000313|EMBL:AGP73045.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_105_085G1_scaffold_40_5
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3025..3672
DNA (648bp) protein (216aa)
Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine n=1 Tax=Lactobacillus rhamnosus LOCK908 RepID=S4ZZ83_LACRH
Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine
Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine {ECO:0000313|EMBL:AGP73046.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_105_085G1_scaffold_40_6
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3786..4478
DNA (693bp) protein (231aa)
Transcriptional activator TenA n=5 Tax=Lactobacillus rhamnosus RepID=C7TG60_LACRL
tenA; transcriptional activator tenA
Thiaminase II {ECO:0000313|EMBL:AGP73047.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_105_085G1_scaffold_40_7
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4459..4959
DNA (501bp) protein (167aa)
Hydroxyethylthiazole permease n=5 Tax=Lactobacillus rhamnosus RepID=C7TG61_LACRL
thiW; hydroxyethylthiazole permease
Substrate-specific component ThiW of predicted thiazole ECF transporter {ECO:0000313|EMBL:AGP73048.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_105_085G1_scaffold_40_8
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5010..5849
DNA (840bp) protein (280aa)
Hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030}; EC=2.7.1.50 {ECO:0000256|HAMAP-Rule:MF_00228, ECO:0000256|SAAS:SAAS00137030};; 4-methyl-5-beta-hydroxyethylthiazole kinase {ECO:0000256|HAMAP-Rule:MF_00228}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Hydroxyethylthiazole kinase n=1 Tax=Lactobacillus rhamnosus LOCK908 RepID=S5A0W2_LACRH
Hydroxyethylthiazole kinase
L3_105_085G1_scaffold_40_9
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5846..6475
DNA (630bp) protein (210aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5.1.3 {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826};; Thiamine-phosphate pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
Thiamine-phosphate synthase n=5 Tax=Lactobacillus rhamnosus RepID=C7TG64_LACRL
thiE; thiamine-phosphate pyrophosphorylase
L3_105_085G1_scaffold_40_10
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6477..7328
DNA (852bp) protein (284aa)
Phosphomethylpyrimidine kinase n=5 Tax=Lactobacillus rhamnosus RepID=C7TG65_LACRL
thiD; phosphomethylpyrimidine kinase
Hydroxymethylpyrimidine phosphate kinase ThiD {ECO:0000313|EMBL:AGP73051.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_105_085G1_scaffold_40_11
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7718..9166
DNA (1449bp) protein (483aa)
Amino acid transporter n=1 Tax=Lactobacillus rhamnosus LOCK908 RepID=S5A8R5_LACRH
Amino acid transporter
Amino acid transporter {ECO:0000313|EMBL:AGP73052.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_105_085G1_scaffold_40_12
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9579..10598
DNA (1020bp) protein (340aa)
Transcriptional regulator, LacI family n=2 Tax=Lactobacillus rhamnosus RepID=C7TG68_LACRL
rbsR; transcriptional regulator LacI family
LacI family transcriptional regulator {ECO:0000313|EMBL:KIC96680.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_105_085G1_scaffold_40_13
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10632..11024
DNA (393bp) protein (131aa)
D-ribose pyranase {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00011477}; EC=5.4.99.62 {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00166232};; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
D-ribose pyranase n=12 Tax=Lactobacillus rhamnosus RepID=B5QLP4_LACRH
Ribose ABC transport system, high affinity permease RbsD
L3_105_085G1_scaffold_40_14
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11117..12691
DNA (1575bp) protein (525aa)
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
ABC-type sugar transport system, ATPase component n=4 Tax=Lactobacillus rhamnosus RepID=B5QLP3_LACRH
ccmA; heme ABC transporter ATP-binding protein CcmA
L3_105_085G1_scaffold_40_15
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12675..13655
DNA (981bp) protein (327aa)
Ribose/xylose/arabinose/galactoside ABC-type transport system, permease component n=10 Tax=Lactobacillus rhamnosus RepID=B5QLP2_LACRH
Ribose ABC transport system, permease protein RbsC
Branched-chain amino acid ABC transporter, permease protein {ECO:0000313|EMBL:EEN79267.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_105_085G1_scaffold_40_16
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13766..14725
DNA (960bp) protein (320aa)
ABC transporter, periplasmic ribose-binding protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TG72_LACRL
Ribose ABC transport system, periplasmic ribose-binding protein RbsB
Ribose ABC transport system, periplasmic ribose-binding protein RbsB {ECO:0000313|EMBL:AGP73058.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_105_085G1_scaffold_40_17
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14823..15764
DNA (942bp) protein (314aa)
Ribokinase n=5 Tax=Lactobacillus rhamnosus RepID=C7TG73_LACRL
rbsK; ribokinase
Ribokinase {ECO:0000313|EMBL:AGP73059.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_105_085G1_scaffold_40_18
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15869..16129)
DNA (261bp) protein (87aa)
Transcriptional regulator n=5 Tax=Lactobacillus rhamnosus RepID=C7TG74_LACRL
helix-turn-helix family protein
XRE family transcriptional regulator {ECO:0000313|EMBL:KIC96664.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_105_085G1_scaffold_40_19
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16336..17022)
DNA (687bp) protein (229aa)
Peptidase S54, rhomboid n=7 Tax=Lactobacillus rhamnosus RepID=C7TG75_LACRL
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP73061.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_105_085G1_scaffold_40_20
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17159..17386)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Lactobacillus rhamnosus 2166 RepID=U2HEB6_LACRH
Uncharacterized protein {ECO:0000313|EMBL:KIC96565.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
hypothetical protein
L3_105_085G1_scaffold_40_21
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17751..17948)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Lactobacillus rhamnosus (strain Lc 705) RepID=C7TG76_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIC96566.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_105_085G1_scaffold_40_22
unknown

Not on your lists

18334..18501
DNA (168bp) protein (56aa)
Uncharacterized protein n=1 Tax=Lactobacillus rhamnosus 2166 RepID=U2HDW3_LACRH
L3_105_085G1_scaffold_40_23
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19057..19263
DNA (207bp) protein (69aa)
Uncharacterized protein n=2 Tax=Lactobacillus rhamnosus RepID=C2K0J2_LACRH
Uncharacterized protein {ECO:0000313|EMBL:EEN79018.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
hypothetical protein
L3_105_085G1_scaffold_40_24
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(19430..20245)
DNA (816bp) protein (272aa)
Uncharacterized protein n=4 Tax=Lactobacillus rhamnosus RepID=S5A0X0_LACRH
hypothetical protein
Membrane protein {ECO:0000313|EMBL:KIC97083.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_105_085G1_scaffold_40_25
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20394..22382)
DNA (1989bp) protein (663aa)
Penicillin-binding protein 3 n=4 Tax=Lactobacillus rhamnosus RepID=C7TG80_LACRL
penicillin binding transpeptidase domain protein
Cell division protein FtsI (Peptidoglycan synthetase) {ECO:0000313|EMBL:AGP73065.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_105_085G1_scaffold_40_26
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22529..23053)
DNA (525bp) protein (175aa)
Conserved protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TG81_LACRL
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP73066.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_105_085G1_scaffold_40_27
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23043..23678)
DNA (636bp) protein (212aa)
ABC transporter, ribose-transporter ATPase component n=4 Tax=Lactobacillus rhamnosus RepID=C7TG82_LACRL
spaF; ribose ABC transporter ATPase
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AGP73067.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_105_085G1_scaffold_40_28
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23690..24331)
DNA (642bp) protein (214aa)
Rhodopsin-like GPCR superfamily n=5 Tax=Lactobacillus rhamnosus RepID=C7TG83_LACRL
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP73068.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_105_085G1_scaffold_40_29
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24409..25089)
DNA (681bp) protein (227aa)
Conserved membrane protein n=4 Tax=Lactobacillus rhamnosus RepID=C7TG84_LACRL
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP73069.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_105_085G1_scaffold_40_30
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(25079..25864)
DNA (786bp) protein (262aa)
Conserved membrane protein n=4 Tax=Lactobacillus rhamnosus RepID=C7TG85_LACRL
membrane protein
Membrane protein {ECO:0000313|EMBL:KIC97089.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
Displaying items 1-30 of 170 in total

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