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L3_105_085G1_scaffold_55

Search features with annotation key words

Displaying items 1-30 of 106 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_085G1_scaffold_55_1
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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330..869
DNA (540bp) protein (180aa)
putative shikimate kinase (EC:2.7.1.71)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
Shikimate kinase n=13 Tax=Bacteroides RepID=AROK_BACFN
L3_105_085G1_scaffold_55_2
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1016..3514
DNA (2499bp) protein (833aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=E1WK70_BACF6
hypothetical protein
Sel1 repeat family protein {ECO:0000313|EMBL:EXY72051.1}; TaxID=1339287 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3986 T(B)9.;"
L3_105_085G1_scaffold_55_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3522..5288
DNA (1767bp) protein (589aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C6I2N1_9BACE
putative heat-shock protein
Putative heat-shock protein {ECO:0000313|EMBL:CBW20792.1}; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
L3_105_085G1_scaffold_55_4
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5297..6376
DNA (1080bp) protein (360aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=E1WK72_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXY92752.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
L3_105_085G1_scaffold_55_5
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6434..8326
DNA (1893bp) protein (631aa)
Biosynthetic arginine decarboxylase {ECO:0000256|HAMAP-Rule:MF_01417}; Short=ADC {ECO:0000256|HAMAP-Rule:MF_01417};; EC=4.1.1.19 {ECO:0000256|HAMAP-Rule:MF_01417, ECO:0000256|SAAS:SAAS00212226};; TaxID=1073387 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 615.;"
Biosynthetic arginine decarboxylase n=14 Tax=Bacteroides RepID=SPEA_BACFN
putative arginine decarboxylase
L3_105_085G1_scaffold_55_6
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8466..9239
DNA (774bp) protein (258aa)
Acetylglutamate kinase {ECO:0000256|HAMAP-Rule:MF_00082}; EC=2.7.2.8 {ECO:0000256|HAMAP-Rule:MF_00082};; N-acetyl-L-glutamate 5-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00082}; NAG kinase {ECO:0000256|HAMAP-Rule:MF_00082}; TaxID=1339283 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3996 N(B) 6.;"
Acetylglutamate kinase n=14 Tax=Bacteroides RepID=ARGB_BACFN
putative acetylglutamate kinase
L3_105_085G1_scaffold_55_7
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9300..9809
DNA (510bp) protein (170aa)
RNA polymerase ECF-type sigma factor n=14 Tax=Bacteroides RepID=Q64ZT6_BACFR
putative extracytoplasmic function alternative sigma factor
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:EYB11613.1}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
L3_105_085G1_scaffold_55_8
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9793..10308
DNA (516bp) protein (172aa)
Uncharacterized protein n=11 Tax=Bacteroides RepID=E1WK76_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIZ01828.1}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
L3_105_085G1_scaffold_55_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10340..10789
DNA (450bp) protein (150aa)
Uncharacterized protein n=14 Tax=Bacteroides RepID=Q64ZT4_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD46992.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_105_085G1_scaffold_55_10
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10977..11756)
DNA (780bp) protein (260aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=Q64ZT3_BACFR
putative lipoprotein
Uncharacterized protein {ECO:0000313|EMBL:BAD46993.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_105_085G1_scaffold_55_11
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11776..12510)
DNA (735bp) protein (245aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=Q64ZT2_BACFR
putative lipoprotein
Uncharacterized protein {ECO:0000313|EMBL:CDD43628.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_105_085G1_scaffold_55_12
Bacteroides fragilis CAG:47, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12631..13329
DNA (699bp) protein (233aa)
Uncharacterized protein n=10 Tax=Bacteroides RepID=E1WK80_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDD43629.1}; TaxID=1263046 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides fragilis CAG:47.;"
L3_105_085G1_scaffold_55_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13491..13889)
DNA (399bp) protein (133aa)
Uncharacterized protein n=5 Tax=Bacteroides RepID=Q64ZT0_BACFR
putative transmembrane protein
Uncharacterized protein {ECO:0000313|EMBL:EIZ01833.1}; TaxID=997881 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL05T12C13.;"
L3_105_085G1_scaffold_55_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14000..15049
DNA (1050bp) protein (350aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=D1JQN7_9BACE
putative transmembrane protein
Transcriptional regulatory family protein {ECO:0000313|EMBL:EXY86446.1}; TaxID=1339283 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3996 N(B) 6.;"
L3_105_085G1_scaffold_55_15
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15210..15437
DNA (228bp) protein (76aa)
Uncharacterized protein n=8 Tax=Bacteroides RepID=Q64ZS8_BACFR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIY53930.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
L3_105_085G1_scaffold_55_16
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15618..15884
DNA (267bp) protein (89aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=D1JQN9_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXY92719.1}; TaxID=1339316 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3998T(B)3.;"
L3_105_085G1_scaffold_55_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15955..17139
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_16 RepID=D1JQP0_9BACE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXZ55667.1}; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
L3_105_085G1_scaffold_55_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17126..17686
DNA (561bp) protein (187aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=E1WKE3_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAD47000.1}; TaxID=295405 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain YCH46).;"
L3_105_085G1_scaffold_55_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17709..17855)
DNA (147bp) protein (49aa)
Uncharacterized protein n=4 Tax=Bacteroides RepID=I0PZ12_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY53934.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
L3_105_085G1_scaffold_55_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17891..18871
DNA (981bp) protein (327aa)
FucR n=10 Tax=Bacteroides RepID=Q64ZS5_BACFR
fucR; GntR family transcriptional regulator
Bacterial regulatory s, gntR family protein {ECO:0000313|EMBL:EXY42678.1}; TaxID=1339308 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3774 T13.;"
L3_105_085G1_scaffold_55_21
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18944..20716
DNA (1773bp) protein (591aa)
L-fucose isomerase {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040911}; Short=FucIase {ECO:0000256|HAMAP-Rule:MF_01254};; EC=5.3.1.25 {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040955};; 6-deoxy-L-galactose isomerase {ECO:0000256|HAMAP-Rule:MF_01254}; TaxID=1339287 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3986 T(B)9.;"
L-fucose isomerase n=2 Tax=Bacteroides RepID=E1WKE5_BACF6
fucI; putative L-fucose isomerase
L3_105_085G1_scaffold_55_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20735..21889
DNA (1155bp) protein (385aa)
Lactaldehyde reductase {ECO:0000313|EMBL:EXY72049.1}; EC=1.1.1.77 {ECO:0000313|EMBL:EXY72049.1};; TaxID=1339287 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3986 T(B)9.;"
Lactaldehyde reductase n=6 Tax=Bacteroides RepID=C6I2L3_9BACE
fucO; putative lactaldehyde reductase
L3_105_085G1_scaffold_55_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21886..22524
DNA (639bp) protein (213aa)
L-fuculose-1-phosphate aldolase n=13 Tax=Bacteroides RepID=Q64ZS2_BACFR
fucA; putative aldolase
Uncharacterized protein {ECO:0000313|EMBL:EIZ00170.1}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_105_085G1_scaffold_55_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22542..23954
DNA (1413bp) protein (471aa)
Putative fuculokinase {ECO:0000313|EMBL:CBW20869.1}; EC=2.7.1.5 {ECO:0000313|EMBL:CBW20869.1};; TaxID=862962 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis (strain 638R).;"
Putative fuculokinase n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WKE8_BACF6
fucK; putative fuculokinase
L3_105_085G1_scaffold_55_25
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23966..25297
DNA (1332bp) protein (444aa)
L-fucose:H+ symporter permease n=4 Tax=Bacteroides RepID=C6I2L0_9BACE
fucP; putative L-fucose permease
L-fucose:H+ symporter permease {ECO:0000313|EMBL:EIY53940.1}; TaxID=997878 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL03T00C08.;"
L3_105_085G1_scaffold_55_26
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25311..26414
DNA (1104bp) protein (368aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C6I2K9_9BACE
putative lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:EXY71981.1}; TaxID=1339287 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3986 T(B)9.;"
L3_105_085G1_scaffold_55_27
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26585..27736
DNA (1152bp) protein (384aa)
Uncharacterized protein n=2 Tax=Bacteroides RepID=C6I2K8_9BACE
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EXY72009.1}; TaxID=1339287 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3986 T(B)9.;"
L3_105_085G1_scaffold_55_28
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27736..28950
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain 638R) RepID=E1WKF2_BACF6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EXY72021.1}; TaxID=1339287 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3986 T(B)9.;"
L3_105_085G1_scaffold_55_29
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29088..29555
DNA (468bp) protein (156aa)
Ribosome maturation factor RimP n=15 Tax=Bacteroides RepID=RIMP_BACFN
hypothetical protein
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077}; TaxID=997883 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis CL07T12C05.;"
L3_105_085G1_scaffold_55_30
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29558..30820
DNA (1263bp) protein (421aa)
Transcription termination factor NusA n=14 Tax=Bacteroides RepID=C6I2K5_9BACE
putative N utilization substance protein A
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1339287 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3986 T(B)9.;"
Displaying items 1-30 of 106 in total

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