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L3_105_085G1_scaffold_67

Search features with annotation key words

Displaying items 1-30 of 120 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_085G1_scaffold_67_1
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(137..229)
DNA (93bp) protein (31aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6BHR3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN15975.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
L3_105_085G1_scaffold_67_2
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

447..1883
DNA (1437bp) protein (479aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=3 Tax=Parabacteroides RepID=A7AEK0_9PORP
two-component system sensor histidine kinase
L3_105_085G1_scaffold_67_3
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1889..2572
DNA (684bp) protein (228aa)
Transcriptional regulatory protein RprY n=3 Tax=Parabacteroides RepID=A7AEK1_9PORP
Transcriptional regulatory protein RprY {ECO:0000313|EMBL:CDD14051.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
two-component system response regulator
L3_105_085G1_scaffold_67_4
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2562..2819)
DNA (258bp) protein (86aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6A853_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14050.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_105_085G1_scaffold_67_5
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3121..3366
DNA (246bp) protein (82aa)
Uncharacterized protein n=7 Tax=Parabacteroides RepID=A7AEK3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14049.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
RNA binding protein
L3_105_085G1_scaffold_67_6
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3509..4816
DNA (1308bp) protein (436aa)
Bifunctional protein FolC n=3 Tax=Parabacteroides RepID=A7AEK5_9PORP
Bifunctional protein FolC {ECO:0000313|EMBL:EDN86480.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
folylpolyglutamate synthase
L3_105_085G1_scaffold_67_7
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4838..6280
DNA (1443bp) protein (481aa)
Transporter, major facilitator family protein n=3 Tax=Parabacteroides RepID=A7AEK6_9PORP
Transporter, major facilitator family protein {ECO:0000313|EMBL:EDN86482.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
oxalate:formate antiporter
L3_105_085G1_scaffold_67_8
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6344..9697)
DNA (3354bp) protein (1118aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AEK7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86483.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_105_085G1_scaffold_67_9
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9799..10236)
DNA (438bp) protein (146aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AEK8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86484.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_105_085G1_scaffold_67_10
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10647..11456
DNA (810bp) protein (270aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090262};; 4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WRW4_9PORP
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase
L3_105_085G1_scaffold_67_11
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11453..12037
DNA (585bp) protein (195aa)
Methyltransferase domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6Y6L7_9PORP
Methyltransferase domain protein {ECO:0000313|EMBL:CDD14042.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
methyltransferase
L3_105_085G1_scaffold_67_12
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12051..14543
DNA (2493bp) protein (831aa)
Peptidase S9A/B/C family catalytic domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XCI5_9PORP
Peptidase S9A/B/C family catalytic domain protein {ECO:0000313|EMBL:CDD14041.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
alanyl dipeptidyl peptidase
L3_105_085G1_scaffold_67_13
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14555..15187
DNA (633bp) protein (211aa)
Putative chloramphenicol O-acetyltransferase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WXL7_9PORP
Putative chloramphenicol O-acetyltransferase {ECO:0000313|EMBL:CDD14040.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
chloramphenicol acetyltransferase (CAT-III)
L3_105_085G1_scaffold_67_14
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15291..16292)
DNA (1002bp) protein (334aa)
Lactate/malate dehydrogenase NAD binding domain protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6X4K6_9PORP
Lactate/malate dehydrogenase NAD binding domain protein {ECO:0000313|EMBL:CDD14039.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
malate dehydrogenase
L3_105_085G1_scaffold_67_15
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16498..18312
DNA (1815bp) protein (605aa)
UPF0313 protein BN675_02436 n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6WRV9_9PORP
UPF0313 protein BN675_02436 {ECO:0000256|HAMAP-Rule:MF_01251}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_105_085G1_scaffold_67_16
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18424..18804)
DNA (381bp) protein (127aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=K6BHQ3_9PORP
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:EDN86491.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
translation initiation inhibitor endoribonuclease L-PSP
L3_105_085G1_scaffold_67_17
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18826..19575)
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XCI3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14036.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
tRNA/rRNA methyltransferase
L3_105_085G1_scaffold_67_18
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19684..20124)
DNA (441bp) protein (147aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A7AEL7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN15958.1}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
hypothetical protein
L3_105_085G1_scaffold_67_19
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20127..20903)
DNA (777bp) protein (259aa)
Uncharacterized protein n=2 Tax=Parabacteroides merdae RepID=A7AEL8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86495.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
hypothetical protein
L3_105_085G1_scaffold_67_20
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20969..22633)
DNA (1665bp) protein (555aa)
DNA repair protein RecN n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZWV2_9PORP
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=999420 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae CL03T12C32.;"
DNA repair protein recN
L3_105_085G1_scaffold_67_21
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22646..23545)
DNA (900bp) protein (300aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=K5ZXC3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD14032.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
hypothetical protein
L3_105_085G1_scaffold_67_22
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23548..24750)
DNA (1203bp) protein (401aa)
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase n=1 Tax=Parabacteroides merdae CAG:48 RepID=R6XCH9_9PORP
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:CDD14031.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
flavoprotein
L3_105_085G1_scaffold_67_23
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24868..26019)
DNA (1152bp) protein (384aa)
Alcohol dehydrogenase, iron-dependent n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AEM3_9PORP
Alcohol dehydrogenase, iron-dependent {ECO:0000313|EMBL:EDN86499.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
alcohol dehydrogenase
L3_105_085G1_scaffold_67_24
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26025..26795)
DNA (771bp) protein (257aa)
Exonuclease, DNA polymerase III, epsilon subunit family n=3 Tax=Parabacteroides RepID=A7AEM4_9PORP
Exonuclease DNA polymerase III epsilon subunit family {ECO:0000313|EMBL:CDD14029.1}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
DNA polymerase III subunit epsilon
L3_105_085G1_scaffold_67_25
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26806..27930)
DNA (1125bp) protein (375aa)
DNA polymerase III subunit beta {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018186}; EC=2.7.7.7 {ECO:0000256|PIRNR:PIRNR000804, ECO:0000256|SAAS:SAAS00018259};; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
DNA polymerase III subunit beta n=3 Tax=Parabacteroides RepID=A7AEM5_9PORP
DNA polymerase III subunit beta
L3_105_085G1_scaffold_67_26
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28136..28288)
DNA (153bp) protein (51aa)
Uncharacterized protein n=18 Tax=Bacteroidales RepID=A7AEM7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEY85189.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein
L3_105_085G1_scaffold_67_27
Parabacteroides merdae CAG:48, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(28303..28491)
DNA (189bp) protein (63aa)
50S ribosomal protein L33 n=4 Tax=Parabacteroides RepID=A7AEM8_9PORP
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=1263094 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides merdae CAG:48.;"
rpmG; 50S ribosomal protein L33
L3_105_085G1_scaffold_67_28
Parabacteroides gordonii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(28511..28750)
DNA (240bp) protein (80aa)
50S ribosomal protein L28 n=8 Tax=Parabacteroides RepID=A7AEM9_9PORP
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1203610 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gordonii MS-1.;"
rpmB; 50S ribosomal protein L28
L3_105_085G1_scaffold_67_29
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28921..30183)
DNA (1263bp) protein (421aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AEN1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN86507.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_105_085G1_scaffold_67_30
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30352..30954
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6BH51_9PORP
Nitroreductase family protein {ECO:0000313|EMBL:EDN86508.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
nitroreductase
Displaying items 1-30 of 120 in total

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