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L3_105_085G1_scaffold_99

Search features with annotation key words

Displaying items 1-30 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_085G1_scaffold_99_1
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..943
DNA (942bp) protein (314aa)
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu n=8 Tax=Bacteroidales RepID=EFTU_PARD8
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
L3_105_085G1_scaffold_99_2
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1087..1281
DNA (195bp) protein (65aa)
Protein translocase subunit SecE n=9 Tax=Bacteroidales RepID=A6LE87_PARD8
preprotein translocase subunit SecE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_105_085G1_scaffold_99_3
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1293..1835
DNA (543bp) protein (181aa)
Transcription termination/antitermination protein NusG n=9 Tax=Bacteroidales RepID=A6LE86_PARD8
transcription anti-termination protein
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_105_085G1_scaffold_99_4
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1903..2346
DNA (444bp) protein (148aa)
50S ribosomal protein L11 n=5 Tax=Bacteroidales RepID=D0THH7_9BACE
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
rplK; 50S ribosomal protein L11
L3_105_085G1_scaffold_99_5
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2362..3060
DNA (699bp) protein (233aa)
50S ribosomal protein L1 n=8 Tax=Bacteroidales RepID=RL1_PARD8
rplA; 50S ribosomal protein L1
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
L3_105_085G1_scaffold_99_6
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


3075..3605
DNA (531bp) protein (177aa)
Ribosomal protein L10 n=4 Tax=Bacteroidales RepID=D0THH5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKN23765.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
rplJ; 50S ribosomal protein L10
L3_105_085G1_scaffold_99_7
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3656..4033
DNA (378bp) protein (126aa)
50S ribosomal protein L7/L12 n=8 Tax=Bacteroidales RepID=C7XBV1_9PORP
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
rplL; 50S ribosomal protein L7/L12
L3_105_085G1_scaffold_99_8
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4141..7953
DNA (3813bp) protein (1271aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
DNA-directed RNA polymerase subunit beta n=11 Tax=Bacteroidales RepID=RPOB_PARD8
L3_105_085G1_scaffold_99_9
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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8030..12325
DNA (4296bp) protein (1432aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=3 Tax=Parabacteroides RepID=C7XBV3_9PORP
L3_105_085G1_scaffold_99_10
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12486..13349
DNA (864bp) protein (288aa)
Uncharacterized protein n=4 Tax=Parabacteroides RepID=A6LE79_PARD8
hypothetical protein
Endonuclease/exonuclease/phosphatase family protein {ECO:0000313|EMBL:KDS71845.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_105_085G1_scaffold_99_11
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13365..14243
DNA (879bp) protein (293aa)
Transcriptional regulator, AraC family n=4 Tax=Bacteroidales RepID=C7XBV5_9PORP
transcriptional regulator
AraC-family regulatory protein {ECO:0000313|EMBL:EFI08594.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_105_085G1_scaffold_99_12
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14611..14925
DNA (315bp) protein (105aa)
Uncharacterized protein n=9 Tax=Bacteroidales RepID=A6LE77_PARD8
transcriptional accessory protein
Uncharacterized protein {ECO:0000313|EMBL:EFK60665.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_105_085G1_scaffold_99_13
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15125..16087)
DNA (963bp) protein (321aa)
N-acetylornithine carbamoyltransferase {ECO:0000313|EMBL:KDS71842.1}; EC=2.1.3.9 {ECO:0000313|EMBL:KDS71842.1};; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
N-acetylornithine carbamoyltransferase n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6BA02_9PORP
ornithine carbamoyltransferase
L3_105_085G1_scaffold_99_14
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16167..17642)
DNA (1476bp) protein (492aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6AA38_9PORP
two-component system sensor histidine kinase
L3_105_085G1_scaffold_99_15
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17693..18940)
DNA (1248bp) protein (416aa)
Gamma-glutamyl phosphate reductase {ECO:0000256|HAMAP-Rule:MF_00412}; Short=GPR {ECO:0000256|HAMAP-Rule:MF_00412};; EC=1.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00412};; Glutamate-5-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; Glutamyl-gamma-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00412}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
Gamma-glutamyl phosphate reductase n=2 Tax=Parabacteroides RepID=K6AMP6_9PORP
proA; gamma-glutamyl phosphate reductase
L3_105_085G1_scaffold_99_16
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18946..20019)
DNA (1074bp) protein (358aa)
gamma-glutamyl kinase (EC:2.7.2.11)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00057535}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|HAMAP-Rule:MF_00456}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
Glutamate 5-kinase n=9 Tax=Bacteroidales RepID=A6LE73_PARD8
L3_105_085G1_scaffold_99_17
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(20035..21690)
DNA (1656bp) protein (552aa)
Acetyl-coenzyme A synthetase n=4 Tax=Bacteroidales RepID=A6LE72_PARD8
Acetyl-CoA synthetase {ECO:0000313|EMBL:KEJ84249.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
acetyl-coenzyme A synthetase
L3_105_085G1_scaffold_99_18
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21703..22257)
DNA (555bp) protein (185aa)
Transcriptional regulator n=9 Tax=Bacteroidales RepID=A6LE71_PARD8
transcriptional regulator
DNA-binding protein {ECO:0000313|EMBL:EFI08601.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_105_085G1_scaffold_99_19
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22441..23094)
DNA (654bp) protein (218aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=A6LE70_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU50313.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_105_085G1_scaffold_99_20
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23248..23436)
DNA (189bp) protein (63aa)
Ferredoxin n=8 Tax=Bacteroidales RepID=C7XBW4_9PORP
Ferredoxin {ECO:0000313|EMBL:EEU50314.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein
L3_105_085G1_scaffold_99_21
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23653..25284
DNA (1632bp) protein (544aa)
1-pyrroline-5-carboxylate dehydrogenase {ECO:0000313|EMBL:EEU50315.1}; EC=1.5.1.12 {ECO:0000313|EMBL:EEU50315.1};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Delta-1-pyrroline-5-carboxylate dehydrogenase n=7 Tax=Parabacteroides RepID=A6LE69_PARD8
delta-1-pyrroline-5-carboxylate dehydrogenase
L3_105_085G1_scaffold_99_22
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25375..26544
DNA (1170bp) protein (390aa)
Proline dehydrogenase {ECO:0000313|EMBL:EEY82563.1}; EC=1.5.99.8 {ECO:0000313|EMBL:EEY82563.1};; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
Proline dehydrogenase n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0THF9_9BACE
proline dehydrogenase
L3_105_085G1_scaffold_99_23
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26625..27428)
DNA (804bp) protein (268aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
Putative pyrroline-5-carboxylate reductase n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0THF8_9BACE
pyrroline-5-carboxylate reductase
L3_105_085G1_scaffold_99_24
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27583..28800
DNA (1218bp) protein (406aa)
Peptidase C1-like family n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0THF7_9BACE
Peptidase C1-like family {ECO:0000313|EMBL:EEY82561.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
aminopeptidase
L3_105_085G1_scaffold_99_25
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28906..29514)
DNA (609bp) protein (203aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1Z057_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN23784.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_105_085G1_scaffold_99_26
unknown

Not on your lists

comp(29462..29590)
DNA (129bp) protein (43aa)

This feature has no annotations

L3_105_085G1_scaffold_99_27
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29615..31474)
DNA (1860bp) protein (620aa)
Transporter, small conductance mechanosensitive ion channel MscS family protein n=2 Tax=Parabacteroides RepID=E1Z056_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN23785.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
mechano-sensitive ion channel
L3_105_085G1_scaffold_99_28
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31490..33724)
DNA (2235bp) protein (745aa)
Peptidase, S9A/B/C family, catalytic domain protein {ECO:0000313|EMBL:EEY82558.1}; EC=3.4.-.- {ECO:0000313|EMBL:EEY82558.1};; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
Peptidase, S9A/B/C family, catalytic domain protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0THF4_9BACE
dipeptidyl aminopeptidase
L3_105_085G1_scaffold_99_29
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33788..33928
DNA (141bp) protein (47aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6BA15_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KDS41872.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
L3_105_085G1_scaffold_99_30
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33870..34367
DNA (498bp) protein (166aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915, ECO:0000256|RuleBase:RU004231}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
Peptidyl-prolyl cis-trans isomerase n=2 Tax=Bacteroidales RepID=K6B4R6_9PORP
FKBP-type peptidyl-prolyl cis-trans isomerase
Displaying items 1-30 of 86 in total

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