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L3_105_085G1_scaffold_141

Search features with annotation key words

Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_085G1_scaffold_141_1
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3..89
DNA (87bp) protein (29aa)
Uncharacterized protein n=1 Tax=Bifidobacterium breve HPH0326 RepID=S2ZK81_BIFBR
transposase
Integrase core domain-containing protein {ECO:0000313|EMBL:EFV36343.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L3_105_085G1_scaffold_141_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

174..770
DNA (597bp) protein (199aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=Q8G6L3_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESV32647.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
L3_105_085G1_scaffold_141_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

784..1632
DNA (849bp) protein (283aa)
Uncharacterized protein n=4 Tax=Bifidobacterium longum RepID=B3DP08_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EIJ32456.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L3_105_085G1_scaffold_141_4
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2581..3276)
DNA (696bp) protein (232aa)
SAM-binding domain protein n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5NFX3_9BIFI
adenine-specific DNA methyltransferase
Adenine-specific DNA methyltransferase {ECO:0000313|EMBL:AHJ18360.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L3_105_085G1_scaffold_141_5
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3487..4245
DNA (759bp) protein (253aa)
Restriction endonuclease BglII n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5MWY2_9BIFI
restriction endonuclease BglII
Restriction endonuclease BglII {ECO:0000313|EMBL:CCY96270.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L3_105_085G1_scaffold_141_6
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4250..5242)
DNA (993bp) protein (331aa)
Putative replication protein RepA n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5N2V4_9BIFI
Putative replication protein RepA {ECO:0000313|EMBL:CCY96269.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
putative replication protein RepA
L3_105_085G1_scaffold_141_7
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5341..6132)
DNA (792bp) protein (264aa)
Putative ftsK/spoIIIE family protein n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5N363_9BIFI
Putative ftsK/spoIIIE family protein {ECO:0000313|EMBL:CCY96369.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
Cell division protein ftsK
L3_105_085G1_scaffold_141_8
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6135..6482)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5MY25_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY96368.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
hypothetical protein
L3_105_085G1_scaffold_141_9
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6475..6891)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5NGV2_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY96367.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
hypothetical protein
L3_105_085G1_scaffold_141_10
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6918..7127)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Bifidobacterium animalis subsp. lactis ATCC 27673 RepID=U3Q6S6_BIFAN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ18366.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L3_105_085G1_scaffold_141_11
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7206..8087
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5MVJ9_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:CCY95800.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
hypothetical protein
L3_105_085G1_scaffold_141_12
Bifidobacterium breve, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8068..9399
DNA (1332bp) protein (444aa)
Putative integrase n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5NG80_9BIFI
Site-specific recombinase
Integrase/recombinase (XerD/RipX family) {ECO:0000313|EMBL:AHJ18368.1}; TaxID=1385940 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium breve JCM 7019.;"
L3_105_085G1_scaffold_141_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9733..10068)
DNA (336bp) protein (112aa)
Transposase n=7 Tax=Bifidobacterium longum subsp. longum RepID=E4R1L9_BIFLM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK71338.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_105_085G1_scaffold_141_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10460..12058)
DNA (1599bp) protein (533aa)
Transcriptional regulator n=3 Tax=Bifidobacterium RepID=F8APB5_BIFLN
GntR family transcriptional regulator {ECO:0000313|EMBL:KEY24033.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
transcriptional regulator
L3_105_085G1_scaffold_141_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12468..13793
DNA (1326bp) protein (442aa)
4-aminobutyrate aminotransferase n=3 Tax=Bifidobacterium longum RepID=B3DP03_BIFLD
gabT; 4-aminobutyrate aminotransferase
4-aminobutyrate aminotransferase {ECO:0000313|EMBL:ACD98862.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_105_085G1_scaffold_141_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13921..14736
DNA (816bp) protein (272aa)
Predicted metal-dependent hydrolase n=2 Tax=Bifidobacterium RepID=D6DAY2_BIFLN
Predicted metal-dependent hydrolase
Predicted metal-dependent hydrolase {ECO:0000313|EMBL:CBK71335.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_105_085G1_scaffold_141_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14823..15188
DNA (366bp) protein (122aa)
Gluconate kinase n=16 Tax=Bifidobacterium RepID=B3DP00_BIFLD
carbohydrate kinase
Gluconate kinase {ECO:0000313|EMBL:ACD98859.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_105_085G1_scaffold_141_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15447..16760)
DNA (1314bp) protein (438aa)
Uncharacterized protein n=18 Tax=Bifidobacterium RepID=B7GSI4_BIFLS
hypothetical protein
Putative AAA+ superfamily ATPase {ECO:0000313|EMBL:ACD98856.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_105_085G1_scaffold_141_19
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16995..17474)
DNA (480bp) protein (160aa)
DNA-binding ferritin-like protein for protection from oxidative damage n=18 Tax=Bifidobacterium RepID=B3DNZ6_BIFLD
dps; dps
DNA-binding ferritin-like protein (Oxidative damage protectant) {ECO:0000313|EMBL:CBK71331.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_105_085G1_scaffold_141_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17571..18914)
DNA (1344bp) protein (448aa)
Hemolysin-like protein n=3 Tax=Bifidobacterium longum RepID=B3DNZ5_BIFLD
Hemolysins and related proteins containing CBS domains
Membrane protein {ECO:0000313|EMBL:KEY24027.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_105_085G1_scaffold_141_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19174..19857)
DNA (684bp) protein (228aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Carbonic anhydrase n=7 Tax=Bacteria RepID=B3DNZ4_BIFLD
cynT; carbonic anhydrase
L3_105_085G1_scaffold_141_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20063..20626
DNA (564bp) protein (188aa)
Peroxiredoxin {ECO:0000313|EMBL:CCK33975.1}; EC=1.11.1.15 {ECO:0000313|EMBL:CCK33975.1};; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
Alkyl hydroperoxide reductase n=9 Tax=Bifidobacterium longum RepID=E8MFZ6_BIFL2
alkyl hydroperoxide reductase
L3_105_085G1_scaffold_141_23
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20794..22710
DNA (1917bp) protein (639aa)
Thioredoxin reductase domain protein {ECO:0000313|EMBL:CCK33976.1}; EC=1.8.1.9 {ECO:0000313|EMBL:CCK33976.1};; TaxID=1205679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum CECT 7347.;"
Thioredoxin reductase n=2 Tax=Bifidobacterium longum RepID=V6XW32_BIFLN
thioredoxin reductase
L3_105_085G1_scaffold_141_24
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22827..24113)
DNA (1287bp) protein (429aa)
Transporter, major facilitator family protein n=9 Tax=Bifidobacterium longum RepID=C5E953_BIFLI
transport protein
MFS transporter {ECO:0000313|EMBL:KEY24023.1}; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
L3_105_085G1_scaffold_141_25
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24668..25666
DNA (999bp) protein (333aa)
Transcriptional regulator, LacI family n=5 Tax=Bifidobacterium longum RepID=C2GXZ2_BIFLN
LacI family transcription regulator
LacI family transcription regulator {ECO:0000313|EMBL:AIW43114.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_105_085G1_scaffold_141_26
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25881..27530
DNA (1650bp) protein (550aa)
Divergent AAA domain protein n=4 Tax=Bifidobacterium longum RepID=I3B533_BIFLN
Divergent AAA domain protein {ECO:0000313|EMBL:EIJ26671.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
transcriptional regulator
L3_105_085G1_scaffold_141_27
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28277..28774)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain NCC 2705) RepID=Q8G6N1_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK71320.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_105_085G1_scaffold_141_28
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28941..29774
DNA (834bp) protein (278aa)
Uncharacterized protein n=8 Tax=Bifidobacterium RepID=A0ZZC0_BIFAA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY95364.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L3_105_085G1_scaffold_141_29
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29845..30468)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DNY5_BIFLD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD98844.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_105_085G1_scaffold_141_30
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30643..33396)
DNA (2754bp) protein (918aa)
Phosphoenolpyruvate carboxylase {ECO:0000256|SAAS:SAAS00018769}; EC=4.1.1.31 {ECO:0000256|SAAS:SAAS00018769};; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
Phosphoenolpyruvate carboxylase n=2 Tax=Bifidobacterium longum RepID=E8MG09_BIFL2
phosphoenolpyruvate carboxylase
Displaying items 1-30 of 69 in total

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