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L3_105_085G1_scaffold_183

Search features with annotation key words

Displaying items 1-30 of 60 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_085G1_scaffold_183_1
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

206..511
DNA (306bp) protein (102aa)
hypothetical protein n=1 Tax=Lactobacillus rhamnosus RepID=UPI00037CA1D0
TetR family transcriptional regulator
TetR family transcriptional regulator {ECO:0000313|EMBL:KIC98691.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_105_085G1_scaffold_183_2
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

741..1115
DNA (375bp) protein (125aa)
Conserved protein n=6 Tax=Lactobacillus rhamnosus RepID=C7TFB4_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEN81608.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_105_085G1_scaffold_183_3
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1308..4556)
DNA (3249bp) protein (1083aa)
Conserved membrane protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TFB5_LACRL
MMPL family protein {ECO:0000313|EMBL:EEN81606.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
membrane protein
L3_105_085G1_scaffold_183_4
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4553..5155)
DNA (603bp) protein (201aa)
Transcriptional regulator, TetR family n=5 Tax=Lactobacillus rhamnosus RepID=C7TFB6_LACRL
TetR family transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGP72754.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_105_085G1_scaffold_183_5
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5362..6126)
DNA (765bp) protein (255aa)
Putative uncharacterized protein n=1 Tax=Lactobacillus rhamnosus HN001 RepID=B5QQR6_LACRH
Uncharacterized protein {ECO:0000313|EMBL:KIC98687.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
Hypothetical protein
L3_105_085G1_scaffold_183_6
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6066..7364)
DNA (1299bp) protein (433aa)
Amidohydrolase domain protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TFB8_LACRL
amidohydrolase domain-containing protein
S-adenosylhomocysteine deaminase {ECO:0000313|EMBL:AGP72756.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_105_085G1_scaffold_183_7
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7398..7844)
DNA (447bp) protein (149aa)
Conserved protein n=6 Tax=Lactobacillus rhamnosus RepID=C7TFB9_LACRL
hypothetical protein
Membrane protein, putative {ECO:0000313|EMBL:AGP72757.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_105_085G1_scaffold_183_8
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7844..8686)
DNA (843bp) protein (281aa)
Conserved protein n=10 Tax=Lactobacillus rhamnosus RepID=C7TFC0_LACRL
hypothetical protein
Membrane protein putative {ECO:0000313|EMBL:EKS50754.1}; TaxID=1203258 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LRHMDP2.;"
L3_105_085G1_scaffold_183_9
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9010..9252)
DNA (243bp) protein (81aa)
Conserved protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TFC1_LACRL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP72759.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_105_085G1_scaffold_183_10
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9530..10192)
DNA (663bp) protein (221aa)
Glycine betaine/carnitine/choline ABC transporter, ATP-binding protein n=12 Tax=Lactobacillus rhamnosus RepID=B5QQR1_LACRH
binding--dependent transport system inner membrane component family protein
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CAR85970.1}; Glycine betaine/carnitine/choline ABC transporter ATP-binding component {ECO:0000313|EMBL:BAI40602.1}; TaxID=568703 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus (strain ATCC 53103 / GG).;"
L3_105_085G1_scaffold_183_11
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10192..11121)
DNA (930bp) protein (310aa)
Periplasmic glycine betaine/choline-binding (Lipo)protein of an ABC-type transport system (Osmoprotectant binding) n=7 Tax=Lactobacillus rhamnosus RepID=B5QQR0_LACRH
opuCC; glycine betaine/carnitine/choline-binding protein
Glycine/betaine ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIC98681.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_105_085G1_scaffold_183_12
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11133..11762)
DNA (630bp) protein (210aa)
Glycine betaine/carnitine/choline ABC transporter, permease protein n=10 Tax=Lactobacillus rhamnosus RepID=B5QQQ9_LACRH
binding--dependent transport system inner membrane component family protein
Choline ABC transporter permease {ECO:0000313|EMBL:KIC98680.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_105_085G1_scaffold_183_13
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11765..13012)
DNA (1248bp) protein (416aa)
ABC-type proline/glycine betaine transport system, ATPase component n=9 Tax=Lactobacillus rhamnosus RepID=B5QQQ8_LACRH
opuCa; glycine/betaine/L-proline ABC transporter ATPase
Osmotically activated L-carnitine/choline ABC transporter, ATP-binding protein OpuCA {ECO:0000313|EMBL:AGP72763.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_105_085G1_scaffold_183_14
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13238..15094
DNA (1857bp) protein (619aa)
Cation transport ATPase n=5 Tax=Lactobacillus rhamnosus RepID=C7TFC6_LACRL
Lead, cadmium, zinc and mercury transporting ATPase {ECO:0000313|EMBL:AGP72764.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Lead, cadmium, zinc and mercury transporting ATPase
L3_105_085G1_scaffold_183_15
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15114..15341
DNA (228bp) protein (76aa)
Copper chaperone n=6 Tax=Lactobacillus rhamnosus RepID=C7TFC7_LACRL
heavy-metal-associated domain protein
Copper chaperone {ECO:0000313|EMBL:AGP72765.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_105_085G1_scaffold_183_16
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15545..16129
DNA (585bp) protein (195aa)
Non-specific DNA-binding protein Dps/Iron-binding ferritin-like antioxidant protein/Ferroxidase n=5 Tax=Lactobacillus rhamnosus RepID=S4ZXS2_LACRH
Non-specific DNA-binding protein Dps/Iron-binding ferritin-like antioxidant protein/Ferroxidase
Uncharacterized protein {ECO:0000313|EMBL:EEN81593.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_105_085G1_scaffold_183_17
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16182..16841
DNA (660bp) protein (220aa)
Transcriptional regulator, crp family n=5 Tax=Lactobacillus rhamnosus RepID=C7TFC9_LACRL
bacterial regulatory s, crp family protein
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:AGP72767.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_105_085G1_scaffold_183_18
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16920..17183)
DNA (264bp) protein (88aa)
Conserved protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TFD0_LACRL
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGP72768.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_105_085G1_scaffold_183_19
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17262..18143)
DNA (882bp) protein (294aa)
CAAX amino terminal protease self-immunity family protein n=3 Tax=Lactobacillus rhamnosus RepID=G7V1E3_LACRH
CAAX amino terminal protease family
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EEN81590.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_105_085G1_scaffold_183_20
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18408..19901
DNA (1494bp) protein (498aa)
PTS system, IICB component n=5 Tax=Lactobacillus rhamnosus RepID=C7TFD2_LACRL
frvB; PTS system transporter subunit IICB
PTS fructose transporter subunit IIB {ECO:0000313|EMBL:KIC98673.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_105_085G1_scaffold_183_21
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19944..20402
DNA (459bp) protein (153aa)
PTS system, IIA component n=4 Tax=Lactobacillus rhamnosus RepID=C7TFD3_LACRL
frvA; PTS system transporter subunit IIA
PTS cellobiose transporter subunit IIA {ECO:0000313|EMBL:KIC98672.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_105_085G1_scaffold_183_22
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

20410..23031
DNA (2622bp) protein (874aa)
Alpha-mannosidase (GH38) n=4 Tax=Lactobacillus rhamnosus RepID=C7TFD4_LACRL
alpha mannosidase, middle domain protein
Alpha-mannosidase {ECO:0000313|EMBL:KIC98671.1}; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
L3_105_085G1_scaffold_183_23
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23043..23834
DNA (792bp) protein (264aa)
Uncharacterized protein n=5 Tax=Lactobacillus rhamnosus RepID=C7TFD5_LACRL
helix-turn-helix domain, rpiR family protein
Sialic acid utilization regulator, RpiR family {ECO:0000313|EMBL:AGP72773.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_105_085G1_scaffold_183_24
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23845..25215
DNA (1371bp) protein (457aa)
Beta-glucosidase n=2 Tax=Lactobacillus rhamnosus RepID=S5A054_LACRH
Beta-glucosidase
Beta-glucosidase {ECO:0000313|EMBL:AGP72774.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_105_085G1_scaffold_183_25
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25225..26100
DNA (876bp) protein (292aa)
ROK family protein n=4 Tax=Lactobacillus rhamnosus RepID=C7TFD8_LACRL
ROK family protein
N-acetylmannosamine kinase {ECO:0000313|EMBL:AGP72775.1}; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
L3_105_085G1_scaffold_183_26
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

26346..26519
DNA (174bp) protein (58aa)
Conserved protein n=10 Tax=Lactobacillus rhamnosus RepID=C7T8P9_LACRG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEN81582.1}; TaxID=525361 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LMS2-1.;"
L3_105_085G1_scaffold_183_27
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26745..27554)
DNA (810bp) protein (270aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00031177}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00108586};; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Tryptophan synthase alpha chain n=5 Tax=Lactobacillus rhamnosus RepID=C7TFE0_LACRL
trpA; tryptophan synthase subunit alpha
L3_105_085G1_scaffold_183_28
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27547..28767)
DNA (1221bp) protein (407aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Tryptophan synthase beta chain n=3 Tax=Lactobacillus rhamnosus RepID=C7TFE1_LACRL
trpB; tryptophan synthase subunit beta
L3_105_085G1_scaffold_183_29
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(28751..29350)
DNA (600bp) protein (200aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; TaxID=47715 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus.;"
N-(5'-phosphoribosyl)anthranilate isomerase n=4 Tax=Lactobacillus rhamnosus RepID=C7TFE2_LACRL
N-(5'phosphoribosyl)anthranilate (PRA) isomerase family protein
L3_105_085G1_scaffold_183_30
Lactobacillus rhamnosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29354..30133)
DNA (780bp) protein (260aa)
Indole-3-glycerol phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046689}; Short=IGPS {ECO:0000256|HAMAP-Rule:MF_00134};; EC=4.1.1.48 {ECO:0000256|HAMAP-Rule:MF_00134, ECO:0000256|SAAS:SAAS00046705};; TaxID=1318634 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus rhamnosus LOCK908.;"
Indole-3-glycerol phosphate synthase n=3 Tax=Lactobacillus rhamnosus RepID=G7V1F4_LACRH
indole-3-glycerol phosphate synthase family protein
Displaying items 1-30 of 60 in total

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