ggKbase home page

L3_105_085G1_scaffold_229

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_085G1_scaffold_229_1
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20..211)
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae ATCC 43184 RepID=A7AAC0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EDN88284.1}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides merdae ATCC 43184.;"
L3_105_085G1_scaffold_229_2
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

712..918
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IDY2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB47425.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
L3_105_085G1_scaffold_229_3
unknown

Not on your lists

comp(884..1168)
DNA (285bp) protein (95aa)

This feature has no annotations

L3_105_085G1_scaffold_229_4
unknown

Not on your lists

1277..1609
DNA (333bp) protein (111aa)

This feature has no annotations

L3_105_085G1_scaffold_229_5
unknown

Not on your lists

comp(1620..1949)
DNA (330bp) protein (110aa)

This feature has no annotations

L3_105_085G1_scaffold_229_6
Bacteroides sp. 2_1_56FAA, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2030..2491)
DNA (462bp) protein (154aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_56FAA RepID=F7LTS4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGN05135.1}; TaxID=665938 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_56FAA.;"
hypothetical protein
L3_105_085G1_scaffold_229_7
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2620..2805
DNA (186bp) protein (62aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6ILX1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB47429.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
L3_105_085G1_scaffold_229_8
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2829..3500
DNA (672bp) protein (224aa)
Uncharacterized protein n=2 Tax=Bacteroides dorei RepID=I9EXV2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY36619.1}; TaxID=997876 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL02T12C06.;"
prophage antirepressor
L3_105_085G1_scaffold_229_9
unknown

Not on your lists

3523..3918
DNA (396bp) protein (132aa)

This feature has no annotations

L3_105_085G1_scaffold_229_10
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4184..4567
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IDY8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB47430.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
L3_105_085G1_scaffold_229_11
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4570..4806
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IPW9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB47431.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
L3_105_085G1_scaffold_229_12
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4981..7047
DNA (2067bp) protein (689aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis 3_1_12 RepID=E4VUU5_BACFG
Uncharacterized protein {ECO:0000313|EMBL:KDS63646.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
hypothetical protein
L3_105_085G1_scaffold_229_13
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7075..7977
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis 3_1_12 RepID=E4VUU4_BACFG
AAA domain protein {ECO:0000313|EMBL:KDS63666.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
hypothetical protein
L3_105_085G1_scaffold_229_14
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7991..8626
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis 3_1_12 RepID=E4VUU3_BACFG
AAA domain protein {ECO:0000313|EMBL:KDS63669.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
ATPase AAA
L3_105_085G1_scaffold_229_15
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8640..9140
DNA (501bp) protein (167aa)
Uncharacterized protein {ECO:0000313|EMBL:KDS63654.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
id=1852459 bin=GWE2_Bacteroidetes_39_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE2_Bacteroidetes_39_28 organism_group=Bacteroidetes
L3_105_085G1_scaffold_229_16
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9146..9400
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IPX3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB47436.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
L3_105_085G1_scaffold_229_17
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9422..10066
DNA (645bp) protein (215aa)
Uncharacterized protein {ECO:0000313|EMBL:KDS63656.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
hypothetical protein MsalJ2_15841 id=1958910 bin=GWE2_Bacteroidetes_42_39 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein
L3_105_085G1_scaffold_229_18
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10030..10473
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL03T12C32 RepID=K5ZA16_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KDS63624.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_105_085G1_scaffold_229_19
unknown

Not on your lists

10575..11141
DNA (567bp) protein (189aa)

This feature has no annotations

L3_105_085G1_scaffold_229_20
Bacteroides pyogenes, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11138..11425
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Bacteroides pyogenes F0041 RepID=U2DZ54_9BACE
Uncharacterized protein {ECO:0000313|EMBL:ERI85186.1}; TaxID=1321819 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides pyogenes F0041.;"
hypothetical protein
L3_105_085G1_scaffold_229_21
unknown

Not on your lists

11515..11679
DNA (165bp) protein (55aa)

This feature has no annotations

L3_105_085G1_scaffold_229_22
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11703..12545
DNA (843bp) protein (281aa)
D12 class N6 adenine-specific DNA methyltransferase n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TA48_9BACE
D12 class N6 adenine-specific DNA methyltransferase {ECO:0000313|EMBL:EEY84111.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
site-specific DNA methylase
L3_105_085G1_scaffold_229_23
unknown

Not on your lists

12559..12729
DNA (171bp) protein (57aa)

This feature has no annotations

L3_105_085G1_scaffold_229_24
unknown

Not on your lists

12805..12996
DNA (192bp) protein (64aa)
Uncharacterized protein n=1 Tax=Parabacteroides merdae CL09T00C40 RepID=K6BGR3_9PORP
L3_105_085G1_scaffold_229_25
Dysgonomonas mossii, Dysgonomonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13132..14706
DNA (1575bp) protein (525aa)
Putative uncharacterized protein n=1 Tax=Dysgonomonas mossii DSM 22836 RepID=F8WWI5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EGK06319.1}; TaxID=742767 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Dysgonomonas.;" source="Dysgonomonas mossii DSM 22836.;"
hypothetical protein
L3_105_085G1_scaffold_229_26
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15045..15314
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Bacteroides ovatus CL02T12C04 RepID=I9TF86_BACOV
Uncharacterized protein {ECO:0000313|EMBL:EIY67851.1}; TaxID=997885 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus CL02T12C04.;"
hypothetical protein
L3_105_085G1_scaffold_229_27
Bacteroides pyogenes, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15321..15752)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Bacteroides pyogenes F0041 RepID=U2C3Y4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:GAE21214.1}; TaxID=1235813 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides pyogenes JCM 10003.;"
L3_105_085G1_scaffold_229_28
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15754..16368)
DNA (615bp) protein (205aa)
Putative phage virion morphogeneis protein n=2 Tax=Bacteroidetes RepID=F3XVH9_9FLAO
Phage virion morphogenesis family protein {ECO:0000313|EMBL:KDS63599.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_105_085G1_scaffold_229_29
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16481..17686)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K5ZZW8_9PORP
Phage Mu F like family protein {ECO:0000313|EMBL:KDS63627.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
phage putative head morphogenesis protein, SPP1 gp7 family
L3_105_085G1_scaffold_229_30
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17686..18075)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Bacteroides pyogenes F0041 RepID=U2DZ40_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS63607.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
Displaying items 1-30 of 59 in total

View Taxonomy