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L3_105_245G1_scaffold_1047

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_245G1_scaffold_1047_1
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..1081)
DNA (1080bp) protein (360aa)
DNA repair protein RecN n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MVI1_CLOSA
recN; DNA repair protein RecN
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_105_245G1_scaffold_1047_2
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1100..1552)
DNA (453bp) protein (151aa)
Arginine repressor n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MW31_CLOSA
argR; arginine repressor
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_105_245G1_scaffold_1047_3
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1549..1776)
DNA (228bp) protein (76aa)
ppnK; inorganic polyphosphate/ATP-NAD kinase PpnK (EC:2.7.1.23)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MSZ4_CLOSA
L3_105_245G1_scaffold_1047_4
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1847..2446)
DNA (600bp) protein (200aa)
Phage major tail protein, phi13 family n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QK33_9CLOT
Phage major tail protein, phi13 family {ECO:0000313|EMBL:EKY28075.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
phi13 family phage major tail protein
L3_105_245G1_scaffold_1047_5
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2449..2781)
DNA (333bp) protein (111aa)
Putative uncharacterized protein n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SSG1_CLOC7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL50558.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 /; 743B).;"
L3_105_245G1_scaffold_1047_6
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2778..3179)
DNA (402bp) protein (134aa)
Phage protein, HK97 gp10 family n=2 Tax=Clostridium botulinum RepID=B1IJ15_CLOBK
HK97 family phage protein
Phage protein, HK97 gp10 family {ECO:0000313|EMBL:ACA45081.1}; TaxID=498213 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Okra / Type B1).;"
L3_105_245G1_scaffold_1047_7
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3184..3510)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum BC1 RepID=R4K6Y9_CLOPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK95405.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
L3_105_245G1_scaffold_1047_8
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3494..3805)
DNA (312bp) protein (104aa)
Gp6 protein n=2 Tax=Clostridium botulinum B RepID=B2TQU9_CLOBB
Gp6 protein
Gp6 protein {ECO:0000313|EMBL:ACD24923.1}; Uncharacterized protein {ECO:0000313|EMBL:CDH91161.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L3_105_245G1_scaffold_1047_9
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3820..5034)
DNA (1215bp) protein (405aa)
mAjor capsid protein a n=1 Tax=Clostridium botulinum RepID=UPI0002DD4D7E
mAjor capsid protein a
Phage major capsid protein, HK97 family {ECO:0000313|EMBL:AIY80899.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
L3_105_245G1_scaffold_1047_10
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5037..5780)
DNA (744bp) protein (248aa)
Peptidase S14, ClpP n=2 Tax=Clostridium botulinum B RepID=B2TQV1_CLOBB
peptidase S14, ClpP
Peptidase S14, ClpP {ECO:0000313|EMBL:ACD23323.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L3_105_245G1_scaffold_1047_11
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5773..6930)
DNA (1158bp) protein (386aa)
Phage portal protein, HK97 family n=2 Tax=Clostridium botulinum B RepID=B2TQV2_CLOBB
phage portal protein, HK97 family
Phage portal protein, HK97 family {ECO:0000313|EMBL:ACD22831.1}; Portal protein, phage associated {ECO:0000313|EMBL:CDH91164.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L3_105_245G1_scaffold_1047_12
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7004..8650)
DNA (1647bp) protein (549aa)
Putative phage terminase, large subunit n=2 Tax=Clostridium botulinum RepID=B2V4L6_CLOBA
putative phage terminase, large subunit
Terminase {ECO:0000313|EMBL:KIL06602.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
L3_105_245G1_scaffold_1047_13
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8640..9140)
DNA (501bp) protein (167aa)
RNA polymerase sigma 70 n=1 Tax=Clostridium botulinum RepID=UPI0003191E44
hypothetical protein
ATPase subunit of terminase family protein {ECO:0000313|EMBL:AIY82038.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
L3_105_245G1_scaffold_1047_14
unknown

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comp(9143..9295)
DNA (153bp) protein (51aa)

This feature has no annotations

L3_105_245G1_scaffold_1047_15
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9289..9612)
DNA (324bp) protein (108aa)
HNH endonuclease n=1 Tax=Clostridium botulinum RepID=UPI00031459F7
HNH endonuclease family protein {ECO:0000313|EMBL:AIY80795.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
Gp54 protein
L3_105_245G1_scaffold_1047_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9775..10317)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z079_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33306.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
site-specific recombinase, phage integrase family
L3_105_245G1_scaffold_1047_17
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10314..10541)
DNA (228bp) protein (76aa)
Conserved domain protein n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V2B1_CLOBA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY82193.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
L3_105_245G1_scaffold_1047_18
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10801..11193)
DNA (393bp) protein (131aa)
Putative possible sigma factor n=2 Tax=Clostridium botulinum B RepID=B2TME9_CLOBB
sigma factor
Putative HTH DNA-binding protein {ECO:0000313|EMBL:CDH89861.1}; Putative possible sigma factor {ECO:0000313|EMBL:ACD22837.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L3_105_245G1_scaffold_1047_19
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(11210..12079)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1N6G9_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF59007.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
Displaying 19 items

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