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L3_105_245G1_scaffold_1178

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_245G1_scaffold_1178_1
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16..258)
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Parabacteroides johnsonii DSM 18315 RepID=B7BHJ2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDM03048.1}; TaxID=702447 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens SD CC 1b.;"
hypothetical protein
L3_105_245G1_scaffold_1178_2
Bacteroides ovatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

262..513
DNA (252bp) protein (84aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IXR2_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFF52114.1}; TaxID=702443 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides ovatus SD CMC 3f.;"
hypothetical protein
L3_105_245G1_scaffold_1178_3
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

483..956
DNA (474bp) protein (158aa)
Uncharacterized protein n=12 Tax=Bacteroidales RepID=D0TQ74_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI06682.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
PcfK-like protein
L3_105_245G1_scaffold_1178_4
Bacteroides sp. 2_1_22, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1169..2218
DNA (1050bp) protein (350aa)
Uncharacterized protein n=12 Tax=root RepID=A7V2F9_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EEZ04554.1}; TaxID=469588 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_22.;"
hypothetical protein
L3_105_245G1_scaffold_1178_5
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2243..2500
DNA (258bp) protein (86aa)
Uncharacterized protein n=4 Tax=Bacteroidetes RepID=D4X210_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EHH02013.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
hypothetical protein
L3_105_245G1_scaffold_1178_6
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2748..2996
DNA (249bp) protein (83aa)
Uncharacterized protein n=3 Tax=Bacteroidetes RepID=F3XQ38_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EHH02015.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
hypothetical protein
L3_105_245G1_scaffold_1178_7
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3049..3357
DNA (309bp) protein (103aa)
Uncharacterized protein n=4 Tax=Bacteroidetes RepID=D4X207_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EHH02016.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
hypothetical protein
L3_105_245G1_scaffold_1178_8
Bacteroides xylanisolvens, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3599..4612
DNA (1014bp) protein (338aa)
SEFIR domain protein n=4 Tax=Bacteroidetes RepID=D4VEU7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDM03057.1}; TaxID=702447 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides xylanisolvens SD CC 1b.;"
hypothetical protein
L3_105_245G1_scaffold_1178_9
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4659..5183)
DNA (525bp) protein (175aa)
Lysozyme {ECO:0000256|RuleBase:RU003788}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU003788};; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
Lysozyme n=1 Tax=Parabacteroides sp. 20_3 RepID=E1YTJ6_9PORP
Phage-related lysozyme (muraminidase)
L3_105_245G1_scaffold_1178_10
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5183..5689)
DNA (507bp) protein (169aa)
Conjugative transposon protein TraQ family protein n=4 Tax=Bacteroidetes RepID=F3XQ34_9FLAO
Conjugative transposon protein TraQ family protein {ECO:0000313|EMBL:EHH02019.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
conjugal transfer protein TraQ
L3_105_245G1_scaffold_1178_11
Bacteroides vulgatus, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5720..6592)
DNA (873bp) protein (291aa)
CHC2 zinc finger domain protein n=1 Tax=Bacteroides vulgatus PC510 RepID=D4V513_BACVU
CHC2 zinc finger domain protein {ECO:0000313|EMBL:EFG19024.1}; TaxID=702446 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides vulgatus PC510.;"
hypothetical protein
L3_105_245G1_scaffold_1178_12
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6601..7176)
DNA (576bp) protein (192aa)
Uncharacterized protein n=4 Tax=Bacteroidetes RepID=F3XQ32_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EHH02021.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
conjugal transfer protein TraO
L3_105_245G1_scaffold_1178_13
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7179..8165)
DNA (987bp) protein (329aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_30 RepID=F7MCJ5_9BACE
Conjugative transposon TraN protein {ECO:0000313|EMBL:EXZ55052.1}; TaxID=1339299 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3397 T14.;"
conjugal transfer protein
L3_105_245G1_scaffold_1178_14
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8220..9569)
DNA (1350bp) protein (450aa)
Conjugative transposon TraM protein n=2 Tax=Bacteroidetes RepID=F3XQ30_9FLAO
Conjugative transposon TraM protein {ECO:0000313|EMBL:EHH02023.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
conjugal transfer protein
L3_105_245G1_scaffold_1178_15
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9598..9858)
DNA (261bp) protein (87aa)
Conserved domain protein n=4 Tax=Bacteroidetes RepID=D4VQ10_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EHH02024.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
conjugal transfer protein TraL
L3_105_245G1_scaffold_1178_16
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9864..10487)
DNA (624bp) protein (208aa)
Conjugative transposon TraK protein n=5 Tax=Bacteroidetes RepID=D4VQ11_9BACE
Conjugative transposon TraK protein {ECO:0000313|EMBL:EFK63281.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
conjugal transfer protein
L3_105_245G1_scaffold_1178_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10519..11361)
DNA (843bp) protein (281aa)
TraJ n=1 Tax=Bacteroides fragilis RepID=Q56VG3_BACFG
TraJ {ECO:0000313|EMBL:AAS83488.1}; TaxID=817 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis.;"
conjugal transfer protein
L3_105_245G1_scaffold_1178_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11365..11994)
DNA (630bp) protein (210aa)
Uncharacterized protein n=8 Tax=Bacteroidales RepID=A7V2H6_BACUN
Uncharacterized protein {ECO:0000313|EMBL:EXY73296.1}; TaxID=1339315 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3988T(B)14.;"
hypothetical protein
L3_105_245G1_scaffold_1178_19
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12021..12410)
DNA (390bp) protein (130aa)
TraH n=1 Tax=Bacteroides fragilis RepID=Q56VG1_BACFG
TraH {ECO:0000313|EMBL:AAS83490.1}; TaxID=817 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis.;"
conjugal transfer protein TraH
L3_105_245G1_scaffold_1178_20
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12442..14946)
DNA (2505bp) protein (835aa)
TraG n=1 Tax=Bacteroides fragilis RepID=Q56VG0_BACFG
TraG {ECO:0000313|EMBL:AAS83491.1}; TaxID=817 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis.;"
conjugal transfer protein TraG
L3_105_245G1_scaffold_1178_21
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15015..15311
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. D1 RepID=G1UKB1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EGX26324.1}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
L3_105_245G1_scaffold_1178_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15286..15597)
DNA (312bp) protein (104aa)
Conjugative transposon protein TraE n=7 Tax=Bacteroidales RepID=A7V2I0_BACUN
TraE {ECO:0000313|EMBL:AAS83493.1}; TaxID=817 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis.;"
conjugal transfer protein TraE
L3_105_245G1_scaffold_1178_23
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15798..16538)
DNA (741bp) protein (247aa)
TraD n=1 Tax=Bacteroides fragilis RepID=Q56VF7_BACFG
TraD {ECO:0000313|EMBL:AAS83494.1}; TaxID=817 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis.;"
hypothetical protein
L3_105_245G1_scaffold_1178_24
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16535..16897)
DNA (363bp) protein (121aa)
TraC n=1 Tax=Bacteroides fragilis RepID=Q56VF6_BACFG
TraC {ECO:0000313|EMBL:AAS83495.1}; TaxID=817 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis.;"
L3_105_245G1_scaffold_1178_25
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16921..17370)
DNA (450bp) protein (150aa)
Uncharacterized protein n=6 Tax=Bacteroides RepID=A7V2I5_BACUN
Putative uncharacterized protein {ECO:0000313|EMBL:EFI06705.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
Conjugative transposon protein TraB
L3_105_245G1_scaffold_1178_26
Bacteroides sp. D1, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17376..18131)
DNA (756bp) protein (252aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=C3QKA6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEO52390.1}; TaxID=556258 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. D1.;"
Conjugative transposon protein TraA
Displaying 26 items

View Taxonomy