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L3_105_245G1_scaffold_38

Search features with annotation key words

Displaying items 1-30 of 127 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_245G1_scaffold_38_1
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

73..3069
DNA (2997bp) protein (999aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CEI8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32928.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
GltD; NADPH-dependent glutamate synthase beta chain
L3_105_245G1_scaffold_38_2
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3151..5748
DNA (2598bp) protein (866aa)
Selenium-dependent molybdenum hydroxylase 1 n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2D5Z4_9CLOT
Selenium-dependent molybdenum hydroxylase 1 {ECO:0000313|EMBL:ERI74971.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
CoxL; aerobic-type carbon monoxide dehydrogenase
L3_105_245G1_scaffold_38_3
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5963..7177
DNA (1215bp) protein (405aa)
Diaminopropionate ammonia-lyase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CEI5_9FIRM
Diaminopropionate ammonia-lyase {ECO:0000313|EMBL:EHO32925.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_105_245G1_scaffold_38_4
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7408..8820
DNA (1413bp) protein (471aa)
Putative selenium metabolism hydrolase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YPT5_9FIRM
Putative selenium metabolism hydrolase {ECO:0000313|EMBL:EHM52384.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
ArgE; acetylornithine deacetylase
L3_105_245G1_scaffold_38_5
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8916..10112
DNA (1197bp) protein (399aa)
Putative carbamoyltransferase YgeW n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BA08_9CLOT
Putative carbamoyltransferase YgeW {ECO:0000313|EMBL:ERI74974.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_105_245G1_scaffold_38_6
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10718..11659
DNA (942bp) protein (314aa)
Carbamate kinase n=2 Tax=Clostridiales RepID=G9YPT7_9FIRM
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
ArcC; carbamate kinase
L3_105_245G1_scaffold_38_7
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11701..12249)
DNA (549bp) protein (183aa)
DNA-binding helix-turn-helix protein n=3 Tax=Clostridiales RepID=G9YPT8_9FIRM
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:ERI74977.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
XRE family transcriptional regulator
L3_105_245G1_scaffold_38_8
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12325..13491)
DNA (1167bp) protein (389aa)
Cysteine desulfurase family protein (Fragment) n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BL50_9CLOT
Cysteine desulfurase family protein {ECO:0000313|EMBL:ERI72960.1}; Flags: Fragment;; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
cysteine desulfurase
L3_105_245G1_scaffold_38_9
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13560..14735)
DNA (1176bp) protein (392aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CEG1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33098.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_105_245G1_scaffold_38_10
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15058..15708
DNA (651bp) protein (217aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CEG0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56813.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
translation elongation factor Ts
L3_105_245G1_scaffold_38_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15721..16413
DNA (693bp) protein (231aa)
Response regulator ArlR n=2 Tax=Clostridiales RepID=G9YPR3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33096.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
L3_105_245G1_scaffold_38_12
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16410..16898
DNA (489bp) protein (163aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YPR4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56811.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_105_245G1_scaffold_38_13
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16914..18407
DNA (1494bp) protein (498aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Clostridiales RepID=G9YPR5_9FIRM
signal transduction histidine kinase
L3_105_245G1_scaffold_38_14
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18542..19252
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CX85_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI73842.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_105_245G1_scaffold_38_15
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19334..20734
DNA (1401bp) protein (467aa)
MBOAT family protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YU80_9FIRM
MBOAT family protein {ECO:0000313|EMBL:EHM42684.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
membrane bound O-acyl transferase MBOAT family protein
L3_105_245G1_scaffold_38_16
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20750..21889
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YU79_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56807.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_105_245G1_scaffold_38_17
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21949..23613)
DNA (1665bp) protein (555aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=H1CEF3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56806.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
transporter, NhaC family (TC 2.A.35)
L3_105_245G1_scaffold_38_18
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23831..25492)
DNA (1662bp) protein (554aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=H1CEF2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56805.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
transporter, NhaC family (TC 2.A.35)
L3_105_245G1_scaffold_38_19
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25635..26156)
DNA (522bp) protein (174aa)
3H domain protein n=2 Tax=Clostridiales RepID=U2BPV7_9CLOT
3H domain protein {ECO:0000313|EMBL:ERI73853.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
L3_105_245G1_scaffold_38_20
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26279..26926
DNA (648bp) protein (216aa)
YheO-like protein n=2 Tax=Clostridiales RepID=G9YU73_9FIRM
YheO-like protein {ECO:0000313|EMBL:ERI73852.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
YheO domain-containing protein
L3_105_245G1_scaffold_38_21
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26931..28337
DNA (1407bp) protein (469aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CEE9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO33086.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
dipeptidase
L3_105_245G1_scaffold_38_22
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28490..29176
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YU71_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM42927.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L3_105_245G1_scaffold_38_23
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29580..30185
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YU68_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM42924.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_105_245G1_scaffold_38_24
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30459..31523
DNA (1065bp) protein (355aa)
Aminomethyltransferase {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981};; Glycine cleavage system T protein {ECO:0000256|HAMAP-Rule:MF_00259}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
gcvT; aminomethyltransferase (EC:2.1.2.10)
Aminomethyltransferase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2D2T3_9CLOT
L3_105_245G1_scaffold_38_25
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31606..31986
DNA (381bp) protein (127aa)
Glycine cleavage system H protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YU66_9FIRM
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
gcvH; glycine cleavage system H protein
L3_105_245G1_scaffold_38_26
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31988..33292
DNA (1305bp) protein (435aa)
Probable glycine dehydrogenase (decarboxylating) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00015358}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00022796};; Glycine cleavage system P-protein subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine decarboxylase subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; Glycine dehydrogenase (aminomethyl-transferring) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
gcvPA; glycine cleavage system P protein subunit 1 (EC:1.4.4.2)
Probable glycine dehydrogenase [decarboxylating] subunit 1 n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2B6S2_9CLOT
L3_105_245G1_scaffold_38_27
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33292..34713
DNA (1422bp) protein (474aa)
Glycine dehydrogenase (aminomethyl-transferring) {ECO:0000256|SAAS:SAAS00022796}; EC=1.4.4.2 {ECO:0000256|SAAS:SAAS00022796};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CEE1_9FIRM
glycine dehydrogenase subunit beta
L3_105_245G1_scaffold_38_28
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34717..36015
DNA (1299bp) protein (433aa)
lpd; dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CEE0_9FIRM
Dihydrolipoyl dehydrogenase {ECO:0000313|EMBL:KGF56794.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_105_245G1_scaffold_38_29
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36262..36534
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BW82_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF56793.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
L3_105_245G1_scaffold_38_30
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36616..38070
DNA (1455bp) protein (485aa)
Transporter n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YU60_9FIRM
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
Displaying items 1-30 of 127 in total

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