ggKbase home page

L3_105_245G1_scaffold_61

Search features with annotation key words

Displaying items 1-30 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_245G1_scaffold_61_1
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2..133
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL09T03C24 RepID=K6B1Y6_9PORP
hemolysin secretion transport system membrane protein
Uncharacterized protein {ECO:0000313|EMBL:EFK60446.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_105_245G1_scaffold_61_2
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

334..1542
DNA (1209bp) protein (403aa)
ROK family protein n=4 Tax=Bacteroidales RepID=C7X3N2_9PORP
ROK family protein {ECO:0000313|EMBL:EFK60930.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
xylose repressor
L3_105_245G1_scaffold_61_3
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1684..2601
DNA (918bp) protein (306aa)
Dihydrodipicolinate synthetase family n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TFA5_9BACE
Dihydrodipicolinate synthetase family protein {ECO:0000313|EMBL:KDS49043.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
N-acetylneuraminate lyase
L3_105_245G1_scaffold_61_4
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2605..3807
DNA (1203bp) protein (401aa)
N-acylglucosamine 2-epimerase {ECO:0000313|EMBL:EEY83979.1}; EC=5.1.3.8 {ECO:0000313|EMBL:EEY83979.1};; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
N-acylglucosamine 2-epimerase n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TFA4_9BACE
renin-binding protein-like protein
L3_105_245G1_scaffold_61_5
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3911..5161
DNA (1251bp) protein (417aa)
Major facilitator family transporter n=7 Tax=Bacteroidales RepID=A6LG37_PARD8
major facilitator family transporter
Uncharacterized protein {ECO:0000313|EMBL:EKN30102.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_105_245G1_scaffold_61_6
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5209..8484
DNA (3276bp) protein (1092aa)
TonB-linked outer membrane protein, SusC/RagA family n=2 Tax=Parabacteroides RepID=E1YZN7_9PORP
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EFK60934.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L3_105_245G1_scaffold_61_7
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8510..10075
DNA (1566bp) protein (522aa)
SusD family protein n=1 Tax=Parabacteroides sp. D13 RepID=C7X3N7_9PORP
SusD family protein {ECO:0000313|EMBL:EEU52507.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L3_105_245G1_scaffold_61_8
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10213..11835
DNA (1623bp) protein (541aa)
BNR/Asp-box repeat protein n=2 Tax=Parabacteroides RepID=E1YZN9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN30099.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
sialidase
L3_105_245G1_scaffold_61_9
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11847..13865
DNA (2019bp) protein (673aa)
Glycosyl hydrolase family 20, catalytic domain protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TF99_9BACE
Glycosyl hydrolase family 20, catalytic domain protein {ECO:0000313|EMBL:EEY83974.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
glycoside hydrolase
L3_105_245G1_scaffold_61_10
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13887..15962
DNA (2076bp) protein (692aa)
GDSL-like protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TF98_9BACE
GDSL-like protein {ECO:0000313|EMBL:EEY83973.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
sialate O-acetylesterase
L3_105_245G1_scaffold_61_11
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15966..17156
DNA (1191bp) protein (397aa)
Cyclically-permuted mutarotase family protein n=2 Tax=Parabacteroides RepID=E1YZP2_9PORP
Cyclically-permuted mutarotase family protein {ECO:0000313|EMBL:EFK60939.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L3_105_245G1_scaffold_61_12
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17920..18144
DNA (225bp) protein (75aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=C7X3P6_9PORP
Putative acetate kinase {ECO:0000313|EMBL:KDS52105.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
L3_105_245G1_scaffold_61_13
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18153..18983)
DNA (831bp) protein (277aa)
Metallo-beta-lactamase superfamily protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6ISB9_9PORP
Metallo-beta-lactamase superfamily protein {ECO:0000313|EMBL:CDB48281.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
L3_105_245G1_scaffold_61_14
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19045..19647)
DNA (603bp) protein (201aa)
TIGR00730 family protein n=3 Tax=Bacteroidales RepID=C7X3P8_9PORP
TIGR00730 family protein {ECO:0000313|EMBL:EEU52518.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
lysine decarboxylase
L3_105_245G1_scaffold_61_15
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19654..20400)
DNA (747bp) protein (249aa)
TIGR02757 family protein n=3 Tax=Bacteroidales RepID=D0TF95_9BACE
TIGR02757 family protein {ECO:0000313|EMBL:EKN30092.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_105_245G1_scaffold_61_16
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20402..21109)
DNA (708bp) protein (236aa)
DNA alkylation repair enzyme n=7 Tax=Bacteroidales RepID=E1YZP7_9PORP
hypothetical protein
DNA alkylation repair enzyme {ECO:0000313|EMBL:EFK60944.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_105_245G1_scaffold_61_17
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21106..22065)
DNA (960bp) protein (320aa)
Glyoxylate reductase {ECO:0000313|EMBL:KDS52099.1}; EC=1.1.1.26 {ECO:0000313|EMBL:KDS52099.1};; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
D-isomer specific 2-hydroxyacid dehydrogenase family protein n=2 Tax=Bacteroidales RepID=D7IKU7_9BACE
D-isomer specific 2-hydroxyacid dehydrogenase
L3_105_245G1_scaffold_61_18
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22150..23379
DNA (1230bp) protein (410aa)
Transporter gate domain protein n=3 Tax=Parabacteroides RepID=E1YZP9_9PORP
Transporter gate domain protein {ECO:0000313|EMBL:EFK60946.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L3_105_245G1_scaffold_61_19
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23470..23901
DNA (432bp) protein (144aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009};; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
Endoribonuclease YbeY n=3 Tax=Parabacteroides RepID=E1YZQ0_9PORP
hypothetical protein
L3_105_245G1_scaffold_61_20
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23930..24103
DNA (174bp) protein (58aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1YZQ1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN30087.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_105_245G1_scaffold_61_21
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24076..24714)
DNA (639bp) protein (213aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=A6LG57_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR44671.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_105_245G1_scaffold_61_22
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24861..26009)
DNA (1149bp) protein (383aa)
Ser/Thr phosphatase family protein n=1 Tax=Parabacteroides sp. D13 RepID=C7X3Q6_9PORP
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EEU52526.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L3_105_245G1_scaffold_61_23
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26128..28005
DNA (1878bp) protein (626aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=2 Tax=Parabacteroides distasonis RepID=MNMG_PARD8
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
L3_105_245G1_scaffold_61_24
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28050..29687
DNA (1638bp) protein (546aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067};; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
Adenine deaminase n=2 Tax=Parabacteroides RepID=E1YZQ5_9PORP
adenine deaminase
L3_105_245G1_scaffold_61_25
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29684..31519
DNA (1836bp) protein (612aa)
UvrABC system protein C n=6 Tax=Bacteroidales RepID=A6LG61_PARD8
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_00203}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
uvrC; excinuclease ABC subunit C
L3_105_245G1_scaffold_61_26
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31547..31999
DNA (453bp) protein (151aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160046};; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
D-tyrosyl-tRNA(Tyr) deacylase n=9 Tax=Bacteroidales RepID=DTD_PARD8
D-tyrosyl-tRNA(Tyr) deacylase
L3_105_245G1_scaffold_61_27
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32002..32334
DNA (333bp) protein (111aa)
MazG nucleotide pyrophosphohydrolase domain protein n=5 Tax=Bacteroidales RepID=D0TF84_9BACE
MazG nucleotide pyrophosphohydrolase domain protein {ECO:0000313|EMBL:EEY83959.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein
L3_105_245G1_scaffold_61_28
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32339..33277
DNA (939bp) protein (313aa)
Deoxyribose-phosphate aldolase {ECO:0000256|SAAS:SAAS00058202}; EC=4.1.2.4 {ECO:0000256|SAAS:SAAS00058202};; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
Deoxyribose-phosphate aldolase n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IDC5_9PORP
deoxyribose-phosphate aldolase
L3_105_245G1_scaffold_61_29
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33469..34506)
DNA (1038bp) protein (346aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=K6A5R3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN31474.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
polyprenyl synthetase
L3_105_245G1_scaffold_61_30
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34545..37310
DNA (2766bp) protein (922aa)
DNA-directed DNA polymerase {ECO:0000313|EMBL:EEU52534.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EEU52534.1};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
DNA-directed DNA polymerase n=1 Tax=Parabacteroides sp. D13 RepID=C7X3R4_9PORP
DNA polymerase I
Displaying items 1-30 of 108 in total

View Taxonomy