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L3_105_245G1_scaffold_77

Search features with annotation key words

Displaying items 1-30 of 97 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_245G1_scaffold_77_1
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

126..521
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6Q007_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24046.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_105_245G1_scaffold_77_2
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

667..3285
DNA (2619bp) protein (873aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6Q007_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24046.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_105_245G1_scaffold_77_3
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3300..4703)
DNA (1404bp) protein (468aa)
Amino acid carrier protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSV6_9CLOT
Amino acid carrier protein {ECO:0000313|EMBL:EEA80907.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
amino acid carrier protein
L3_105_245G1_scaffold_77_4
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4969..6258
DNA (1290bp) protein (430aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=2 Tax=Clostridium RepID=B6FSV5_9CLOT
L3_105_245G1_scaffold_77_5
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6496..7053
DNA (558bp) protein (186aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FSV3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80904.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Protein of unknown function (DUF1393).
L3_105_245G1_scaffold_77_6
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7103..7747
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSV2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80903.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_105_245G1_scaffold_77_7
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7744..8592
DNA (849bp) protein (283aa)
Thymidylate synthase {ECO:0000313|EMBL:EEA80902.1}; EC=2.1.1.45 {ECO:0000313|EMBL:EEA80902.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSV1_9CLOT
L3_105_245G1_scaffold_77_8
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8604..9095
DNA (492bp) protein (164aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSV0_9CLOT
L3_105_245G1_scaffold_77_9
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9109..9999
DNA (891bp) protein (297aa)
Cof-like hydrolase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSU9_9CLOT
Cof-like hydrolase {ECO:0000313|EMBL:EEA80900.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
HAD-superfamily hydrolase, subfamily IIB
L3_105_245G1_scaffold_77_10
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9996..10241)
DNA (246bp) protein (82aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=B6FSU8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24072.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_105_245G1_scaffold_77_11
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10370..10525
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSU7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80898.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_105_245G1_scaffold_77_12
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10689..12416
DNA (1728bp) protein (576aa)
Acetolactate synthase {ECO:0000256|RuleBase:RU003591}; EC=2.2.1.6 {ECO:0000256|RuleBase:RU003591};; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
acetolactate synthase, large subunit, biosynthetic type (EC:2.2.1.6)
Acetolactate synthase n=2 Tax=Clostridium RepID=B6FSU5_9CLOT
L3_105_245G1_scaffold_77_13
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12431..12940
DNA (510bp) protein (170aa)
Acetolactate synthase, small subunit {ECO:0000313|EMBL:EEA80895.1}; EC=2.2.1.6 {ECO:0000313|EMBL:EEA80895.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
acetolactate synthase, small subunit (EC:2.2.1.6)
Acetolactate synthase, small subunit n=2 Tax=Clostridium RepID=B6FSU4_9CLOT
L3_105_245G1_scaffold_77_14
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13058..14083
DNA (1026bp) protein (342aa)
Branched-chain-amino-acid transaminase {ECO:0000313|EMBL:EEA80894.1}; EC=2.6.1.42 {ECO:0000313|EMBL:EEA80894.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
branched-chain amino acid aminotransferase, group II (EC:2.6.1.42)
Branched-chain-amino-acid transaminase n=2 Tax=Clostridium RepID=B6FSU3_9CLOT
L3_105_245G1_scaffold_77_15
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14134..15465)
DNA (1332bp) protein (444aa)
Magnesium transporter n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FSU2_9CLOT
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Mg2+ transporter (mgtE)
L3_105_245G1_scaffold_77_16
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15940..16695
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PTN1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24079.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Methylase involved in ubiquinone/menaquinone biosynthesis
L3_105_245G1_scaffold_77_17
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16698..17576
DNA (879bp) protein (293aa)
33 kDa chaperonin n=2 Tax=Clostridium RepID=B6FSU0_9CLOT
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Disulfide bond chaperones of the HSP33 family
L3_105_245G1_scaffold_77_18
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17598..19517
DNA (1920bp) protein (640aa)
NAD+ synthase {ECO:0000313|EMBL:EEA80890.1}; EC=6.3.1.5 {ECO:0000313|EMBL:EEA80890.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
NAD+ synthetase (EC:6.3.5.1)
NAD+ synthase n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FST9_9CLOT
L3_105_245G1_scaffold_77_19
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19588..20241)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FST8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80889.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_105_245G1_scaffold_77_20
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20365..22065)
DNA (1701bp) protein (567aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FST7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80888.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Predicted ATPase of the ABC class
L3_105_245G1_scaffold_77_21
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22330..24645
DNA (2316bp) protein (772aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PTN3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC24084.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Cna protein B-type domain.
L3_105_245G1_scaffold_77_22
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24642..26495
DNA (1854bp) protein (618aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FST5_9CLOT
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:EEA80886.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Cna protein B-type domain.
L3_105_245G1_scaffold_77_23
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26513..27322
DNA (810bp) protein (270aa)
Sortase family protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FST4_9CLOT
Sortase family protein {ECO:0000313|EMBL:EEA80885.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
LPXTG-site transpeptidase (sortase) family protein
L3_105_245G1_scaffold_77_24
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27315..27941
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FST3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80884.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_105_245G1_scaffold_77_25
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28018..29292
DNA (1275bp) protein (425aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
3-isopropylmalate dehydratase, large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FST2_9CLOT
L3_105_245G1_scaffold_77_26
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29292..29783
DNA (492bp) protein (164aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit n=2 Tax=Clostridium RepID=B6FST1_9CLOT
L3_105_245G1_scaffold_77_27
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29885..31177
DNA (1293bp) protein (431aa)
Na+/H+ antiporter family protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FST0_9CLOT
Na+/H+ antiporter family protein {ECO:0000313|EMBL:EEA80881.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Na+/H+ antiporter
L3_105_245G1_scaffold_77_28
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31283..32770
DNA (1488bp) protein (496aa)
L-threonine synthase (EC:4.2.3.1)
Threonine synthase n=1 Tax=Clostridium nexile CAG:348 RepID=R6QQ84_9CLOT
Threonine synthase {ECO:0000313|EMBL:CDC24092.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
L3_105_245G1_scaffold_77_29
Ruminococcus sp. CAG:55, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32789..33133
DNA (345bp) protein (115aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:55 RepID=R6P961_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDC15061.1}; TaxID=1262960 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:55.;"
L3_105_245G1_scaffold_77_30
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33514..35118
DNA (1605bp) protein (535aa)
Phosphoenolpyruvate carboxykinase [ATP] {ECO:0000256|HAMAP-Rule:MF_00453}; Short=PCK {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEP carboxykinase {ECO:0000256|HAMAP-Rule:MF_00453};; Short=PEPCK {ECO:0000256|HAMAP-Rule:MF_00453};; EC=4.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00453};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
phosphoenolpyruvate carboxykinase (ATP) (EC:4.1.1.49)
Phosphoenolpyruvate carboxykinase [ATP] n=2 Tax=Clostridium RepID=B6FSS6_9CLOT
Displaying items 1-30 of 97 in total

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