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L3_105_245G1_scaffold_98

Search features with annotation key words

Displaying items 1-30 of 99 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_245G1_scaffold_98_1
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

130..1641
DNA (1512bp) protein (504aa)
YjeF domain protein n=7 Tax=Bacteroidales RepID=C7XCT7_9PORP
sugar kinase
YjeF-related family protein {ECO:0000313|EMBL:KDS62993.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_105_245G1_scaffold_98_2
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1803..1967)
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IJD2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN27937.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_105_245G1_scaffold_98_3
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2336..3604
DNA (1269bp) protein (423aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=C7XCT6_9PORP
secreted glycosylhydrolase
Putative secreted glycosylhydrolase {ECO:0000313|EMBL:CDB49406.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
L3_105_245G1_scaffold_98_4
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3633..5147
DNA (1515bp) protein (505aa)
Tat pathway signal sequence domain protein n=9 Tax=Bacteroidales RepID=C7XCT5_9PORP
dehydrogenase
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EFK63134.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_105_245G1_scaffold_98_5
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5169..6023
DNA (855bp) protein (285aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=A6LD74_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR43638.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_105_245G1_scaffold_98_6
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6122..6412
DNA (291bp) protein (97aa)
RNA polymerase ECF-type sigma factor n=5 Tax=Bacteroidales RepID=A6LD75_PARD8
RNA polymerase ECF-type sigma factor
RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:EFI08906.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_105_245G1_scaffold_98_7
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6530..7399)
DNA (870bp) protein (290aa)
Sigma factor regulatory protein, FecR/PupR family n=1 Tax=Parabacteroides sp. D13 RepID=C7XG95_9PORP
Sigma factor regulatory protein, FecR/PupR family {ECO:0000313|EMBL:EEU49051.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
anti-sigma factor
L3_105_245G1_scaffold_98_8
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7482..7739)
DNA (258bp) protein (86aa)
RNA polymerase ECF-type sigma factor n=7 Tax=Bacteroidales RepID=A6LD77_PARD8
RNA polymerase ECF-type sigma factor
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:KDS50811.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
L3_105_245G1_scaffold_98_9
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7821..11222
DNA (3402bp) protein (1134aa)
SusC/RagA family TonB-linked outer membrane protein n=2 Tax=Parabacteroides RepID=K5ZE90_9PORP
TonB-linked outer membrane , SusC/RagA family protein {ECO:0000313|EMBL:KDS49852.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
hypothetical protein
L3_105_245G1_scaffold_98_10
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11240..12886
DNA (1647bp) protein (549aa)
Putative outer membrane protein probably involved in nutrient binding n=1 Tax=Parabacteroides sp. CAG:2 RepID=R6IGH6_9PORP
Starch-binding associating with outer membrane family protein {ECO:0000313|EMBL:KDS62951.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
hypothetical protein
L3_105_245G1_scaffold_98_11
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13057..13713
DNA (657bp) protein (219aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A6LD80_PARD8
hypothetical protein
Endonuclease/exonuclease/phosphatase family protein {ECO:0000313|EMBL:EEU50630.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_105_245G1_scaffold_98_12
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13874..14941
DNA (1068bp) protein (356aa)
Uncharacterized protein n=6 Tax=Parabacteroides RepID=C7XCS9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU50629.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L3_105_245G1_scaffold_98_13
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14968..16623
DNA (1656bp) protein (552aa)
Putative H+/peptide symporter n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LD82_PARD8
Putative H+/peptide symporter {ECO:0000313|EMBL:ABR43646.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
H+/peptide symporter
L3_105_245G1_scaffold_98_14
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16655..17119
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LD83_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR43647.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_105_245G1_scaffold_98_15
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17126..18109
DNA (984bp) protein (328aa)
Biotin synthase {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00009987}; EC=2.8.1.6 {ECO:0000256|HAMAP-Rule:MF_01694, ECO:0000256|SAAS:SAAS00250466};; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
Biotin synthase n=2 Tax=Parabacteroides RepID=E1YT52_9PORP
biotin synthetase
L3_105_245G1_scaffold_98_16
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18106..19386
DNA (1281bp) protein (427aa)
Adenosylmethionine-8-amino-7-oxononanoate transaminase {ECO:0000313|EMBL:EEY82207.1}; EC=2.6.1.62 {ECO:0000313|EMBL:EEY82207.1};; Flags: Fragment;; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC:2.6.1.62)
Adenosylmethionine-8-amino-7-oxononanoate aminotransferase n=2 Tax=Bacteroidales RepID=K6ANI9_9PORP
L3_105_245G1_scaffold_98_17
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19417..20622
DNA (1206bp) protein (402aa)
8-amino-7-oxononanoate synthase {ECO:0000313|EMBL:EFK63146.1}; EC=2.3.1.47 {ECO:0000313|EMBL:EFK63146.1};; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
8-amino-7-oxononanoate synthase n=2 Tax=Parabacteroides RepID=E1YT54_9PORP
8-amino-7-oxononanoate synthase
L3_105_245G1_scaffold_98_18
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20648..21313
DNA (666bp) protein (222aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1YT55_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN28407.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_105_245G1_scaffold_98_19
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21304..22065
DNA (762bp) protein (254aa)
Malonyl-[acyl-carrier protein] O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00835, ECO:0000256|SAAS:SAAS00055581}; Short=Malonyl-ACP O-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00835};; EC=2.1.1.197 {ECO:0000256|HAMAP-Rule:MF_00835, ECO:0000256|SAAS:SAAS00055581};; Biotin synthesis protein BioC {ECO:0000256|HAMAP-Rule:MF_00835}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
Malonyl-[acyl-carrier protein] O-methyltransferase n=2 Tax=Parabacteroides RepID=E1YT56_9PORP
biotin synthase
L3_105_245G1_scaffold_98_20
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22285..22965
DNA (681bp) protein (227aa)
ATP-dependent dethiobiotin synthetase BioD {ECO:0000256|HAMAP-Rule:MF_00336}; EC=6.3.3.3 {ECO:0000256|HAMAP-Rule:MF_00336};; DTB synthetase {ECO:0000256|HAMAP-Rule:MF_00336}; Dethiobiotin synthase {ECO:0000256|HAMAP-Rule:MF_00336}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
ATP-dependent dethiobiotin synthetase BioD n=2 Tax=Parabacteroides RepID=E1YT57_9PORP
dethiobiotin synthetase
L3_105_245G1_scaffold_98_21
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22973..23365)
DNA (393bp) protein (131aa)
Uncharacterized protein n=9 Tax=Bacteroidales RepID=A6LD90_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK63150.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_105_245G1_scaffold_98_22
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23603..26689
DNA (3087bp) protein (1029aa)
TonB-linked outer membrane protein, SusC/RagA family n=5 Tax=Bacteroidales RepID=C7XCR9_9PORP
hypothetical protein
Outer membrane protein {ECO:0000313|EMBL:EFI08893.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_105_245G1_scaffold_98_23
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26723..28210
DNA (1488bp) protein (496aa)
Outer membrane protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7ISG5_9BACE
Outer membrane protein {ECO:0000313|EMBL:EFI08892.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_105_245G1_scaffold_98_24
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28265..28846)
DNA (582bp) protein (194aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=A6LD93_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFK63153.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_105_245G1_scaffold_98_25
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28940..29776)
DNA (837bp) protein (279aa)
Transcriptional regulator, AraC family n=2 Tax=Parabacteroides RepID=E1YT62_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN28400.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
transcriptional regulator
L3_105_245G1_scaffold_98_26
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29896..30366)
DNA (471bp) protein (157aa)
Thioredoxin n=6 Tax=Bacteroidales RepID=A6LD95_PARD8
thioredoxin
Thioredoxin {ECO:0000313|EMBL:EKN30520.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L3_105_245G1_scaffold_98_27
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30585..31490)
DNA (906bp) protein (302aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=E1YT65_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK63157.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L3_105_245G1_scaffold_98_28
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31512..31976)
DNA (465bp) protein (155aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=D0TGG6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEY82220.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein
L3_105_245G1_scaffold_98_29
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31990..32535)
DNA (546bp) protein (182aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=A6LD98_PARD8
Uncharacterized protein {ECO:0000313|EMBL:KEJ83897.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_105_245G1_scaffold_98_30
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(32526..33077)
DNA (552bp) protein (184aa)
Sigma-70 region 2 n=3 Tax=Bacteroidales RepID=E1YT68_9PORP
Sigma-70 region 2 {ECO:0000313|EMBL:EFK63160.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
RNA polymerase ECF-type sigma factor
Displaying items 1-30 of 99 in total

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