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L3_105_245G1_scaffold_155

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Displaying items 1-30 of 69 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_245G1_scaffold_155_1
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(890..5152)
DNA (4263bp) protein (1421aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1BDK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO23838.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
hypothetical protein
L3_105_245G1_scaffold_155_2
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(5310..5933)
DNA (624bp) protein (208aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
Superoxide dismutase n=7 Tax=Firmicutes RepID=E4LRD6_9CLOT
superoxide dismutase
L3_105_245G1_scaffold_155_3
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6747..8027
DNA (1281bp) protein (427aa)
Phosphoadenosine phosphosulfate reductase family protein n=3 Tax=Firmicutes RepID=E4LRD8_9CLOT
Phosphoadenosine phosphosulfate reductase family protein {ECO:0000313|EMBL:EFR38649.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Co-activator of prophage gene expression IbrA
L3_105_245G1_scaffold_155_4
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

8028..8588
DNA (561bp) protein (187aa)
ParB-like protein n=5 Tax=Firmicutes RepID=E4LRD9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EGX70334.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
immunoglobulin-binding regulator B
L3_105_245G1_scaffold_155_5
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

8698..8997
DNA (300bp) protein (100aa)
Uncharacterized protein n=3 Tax=unclassified Erysipelotrichaceae RepID=G1VX33_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO23834.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
L3_105_245G1_scaffold_155_6
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(9828..13688)
DNA (3861bp) protein (1287aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Transcriptase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=6 Tax=Firmicutes RepID=E4LRE1_9CLOT
L3_105_245G1_scaffold_155_7
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13693..17904)
DNA (4212bp) protein (1404aa)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
DNA-directed RNA polymerase subunit beta n=4 Tax=Firmicutes RepID=E4LRE2_9CLOT
rpoB; DNA-directed RNA polymerase subunit beta
L3_105_245G1_scaffold_155_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18005..18616)
DNA (612bp) protein (204aa)
Methyltransferase small domain protein n=4 Tax=Firmicutes RepID=E4LRE3_9CLOT
Methyltransferase domain protein {ECO:0000313|EMBL:EQJ60073.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
methyltransferase
L3_105_245G1_scaffold_155_9
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


comp(18688..19059)
DNA (372bp) protein (124aa)
50S ribosomal protein L7/L12 n=7 Tax=Firmicutes RepID=E4LRE4_9CLOT
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
LSU ribosomal protein L12P
L3_105_245G1_scaffold_155_10
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


comp(19081..19602)
DNA (522bp) protein (174aa)
50S ribosomal protein L10 n=8 Tax=Firmicutes RepID=E2SRZ0_9FIRM
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
LSU ribosomal protein L10P
L3_105_245G1_scaffold_155_11
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(19806..20492)
DNA (687bp) protein (229aa)
50S ribosomal protein L1 n=6 Tax=Firmicutes RepID=E4LRE6_9CLOT
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
LSU ribosomal protein L1P
L3_105_245G1_scaffold_155_12
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


comp(20510..20926)
DNA (417bp) protein (139aa)
50S ribosomal protein L11 n=8 Tax=Firmicutes RepID=E2SRY8_9FIRM
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
LSU ribosomal protein L11P
L3_105_245G1_scaffold_155_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21727..22695
DNA (969bp) protein (323aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=E4LRF0_9CLOT
Prolyl oligopeptidase family protein {ECO:0000313|EMBL:EQJ60079.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
alpha/beta hydrolase
L3_105_245G1_scaffold_155_14
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22791..23612)
DNA (822bp) protein (274aa)
Transcriptional regulator, MerR family n=4 Tax=Firmicutes RepID=E4LRF1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC87548.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
MerR family transcriptional regulator
L3_105_245G1_scaffold_155_15
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23682..24413)
DNA (732bp) protein (244aa)
Ser/Thr phosphatase family protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LRF2_9CLOT
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EFR38639.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
metallophosphoesterase
L3_105_245G1_scaffold_155_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24551..25624
DNA (1074bp) protein (358aa)
DNA-binding helix-turn-helix protein n=4 Tax=Firmicutes RepID=E4LRF3_9CLOT
Helix-turn-helix family protein {ECO:0000313|EMBL:EQJ60082.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
XRE family transcriptional regulator
L3_105_245G1_scaffold_155_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25735..26784)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=6 Tax=Firmicutes RepID=E4LRF4_9CLOT
Suppressor of fused family protein {ECO:0000313|EMBL:EQJ60083.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_105_245G1_scaffold_155_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26990..28657)
DNA (1668bp) protein (556aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LRF5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ60084.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_105_245G1_scaffold_155_19
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28958..30292)
DNA (1335bp) protein (445aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=E4LRF6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR38632.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L3_105_245G1_scaffold_155_20
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30289..31152)
DNA (864bp) protein (288aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridiales RepID=E4LRF7_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFR38608.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
ABC transporter ATP-binding protein
L3_105_245G1_scaffold_155_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31287..32462)
DNA (1176bp) protein (392aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LRF8_9CLOT
ABC-2 transporter family protein {ECO:0000313|EMBL:EQJ60087.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_105_245G1_scaffold_155_22
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32455..33189)
DNA (735bp) protein (245aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=E4LRF9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR38651.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L3_105_245G1_scaffold_155_23
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(33186..33713)
DNA (528bp) protein (176aa)
Sigma-70 region 2 n=5 Tax=Firmicutes RepID=E4LRG0_9CLOT
Sigma-70 family RNA polymerase sigma factor {ECO:0000313|EMBL:CDC87538.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L3_105_245G1_scaffold_155_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34362..34964)
DNA (603bp) protein (201aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=H1AWK7_9FIRM
AAA domain protein {ECO:0000313|EMBL:EQJ60092.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Zeta toxin.
L3_105_245G1_scaffold_155_25
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35047..35883)
DNA (837bp) protein (279aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
Ketose-bisphosphate aldolase n=2 Tax=Clostridiales RepID=E4LRG4_9CLOT
Ketose-bisphosphate aldolase {ECO:0000313|EMBL:EFR38583.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L3_105_245G1_scaffold_155_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35923..36303)
DNA (381bp) protein (127aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=E4LRG5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ60094.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Tetratricopeptide repeat.
L3_105_245G1_scaffold_155_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36314..37597)
DNA (1284bp) protein (428aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=H1BDH4_9FIRM
PTS system sugar-specific permease component family protein {ECO:0000313|EMBL:EQJ60095.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
PTS system Galactitol-specific IIC component
L3_105_245G1_scaffold_155_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37629..37916)
DNA (288bp) protein (96aa)
Phosphotransferase system, galactitol-specific IIB component (EC:2.7.1.69)
PTS system, Lactose/Cellobiose specific IIB subunit n=3 Tax=Firmicutes RepID=E4LRG7_9CLOT
PTS system, Lactose/Cellobiose specific IIB subunit {ECO:0000313|EMBL:EQJ60096.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_105_245G1_scaffold_155_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37954..38394)
DNA (441bp) protein (147aa)
Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) (EC:2.7.1.69)
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 n=2 Tax=Clostridiales RepID=E4LRG8_9CLOT
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 family protein {ECO:0000313|EMBL:EQJ60097.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_105_245G1_scaffold_155_30
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(38399..40546)
DNA (2148bp) protein (716aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VWZ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY89204.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
transcriptional antiterminator, BglG family/transcriptional regulator
Displaying items 1-30 of 69 in total

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