ggKbase home page

L3_105_245G1_scaffold_158

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_245G1_scaffold_158_1
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

140..958
DNA (819bp) protein (273aa)
Lipase n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7INP4_9BACE
Lipase {ECO:0000313|EMBL:EFI09032.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
lipase
L3_105_245G1_scaffold_158_2
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

986..2431
DNA (1446bp) protein (482aa)
Glucosylceramidase n=2 Tax=Bacteroidales RepID=D7INP5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKN32908.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
beta-glycosidase
L3_105_245G1_scaffold_158_3
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2594..4219)
DNA (1626bp) protein (542aa)
Efflux transporter, RND family, MFP subunit n=3 Tax=Bacteroidales RepID=D0TIX7_9BACE
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EKN25761.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
metal transport-like protein
L3_105_245G1_scaffold_158_4
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4224..5720)
DNA (1497bp) protein (499aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC 11152) RepID=A6LCW6_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR43530.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_105_245G1_scaffold_158_5
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5710..9456)
DNA (3747bp) protein (1249aa)
CzcA family heavy metal efflux pump n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6B2A2_9PORP
CzcA family heavy metal efflux pump {ECO:0000313|EMBL:EKN22168.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
copper/silver resistance-related transport membrane protein
L3_105_245G1_scaffold_158_6
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10224..11507
DNA (1284bp) protein (428aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=C7X8M7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDB49931.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
L3_105_245G1_scaffold_158_7
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11589..13199)
DNA (1611bp) protein (537aa)
Voltage-gated chloride channel protein n=3 Tax=Parabacteroides RepID=R6JIL1_9PORP
Voltage-gated chloride channel protein {ECO:0000313|EMBL:CDB49932.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
transporter periplasmic binding protein
L3_105_245G1_scaffold_158_8
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13342..14340)
DNA (999bp) protein (333aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1YS51_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK63382.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L3_105_245G1_scaffold_158_9
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14509..15771
DNA (1263bp) protein (421aa)
MATE efflux family protein n=2 Tax=Bacteroidales RepID=C7X8N0_9PORP
MATE efflux family protein {ECO:0000313|EMBL:EEU51559.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
multidrug efflux pump BexA
L3_105_245G1_scaffold_158_10
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(15776..16900)
DNA (1125bp) protein (375aa)
Putative DNA polymerase III, delta' subunit n=1 Tax=Parabacteroides sp. D13 RepID=C7X8N1_9PORP
Putative DNA polymerase III, delta' subunit {ECO:0000313|EMBL:EEU51560.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
DNA polymerase III subunit delta
L3_105_245G1_scaffold_158_11
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16957..17058)
DNA (102bp) protein (34aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL09T03C24 RepID=K6AQD0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN25770.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_105_245G1_scaffold_158_12
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17155..18108)
DNA (954bp) protein (318aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
Methylenetetrahydrofolate reductase n=2 Tax=Parabacteroides RepID=E1YS54_9PORP
5,10-methylenetetrahydrofolate reductase
L3_105_245G1_scaffold_158_13
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18651..19670
DNA (1020bp) protein (340aa)
branched-chain amino acid aminotransferase (EC:2.6.1.42)
Branched-chain-amino-acid transaminase {ECO:0000313|EMBL:EEY81684.1}; EC=2.6.1.42 {ECO:0000313|EMBL:EEY81684.1};; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
Branched-chain amino acid aminotransferase n=9 Tax=Bacteroidales RepID=A6LCV6_PARD8
L3_105_245G1_scaffold_158_14
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19851..21029
DNA (1179bp) protein (393aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=D0TIZ0_9BACE
AAA domain protein {ECO:0000313|EMBL:KDS54053.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
hypothetical protein
L3_105_245G1_scaffold_158_15
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21068..24619
DNA (3552bp) protein (1184aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
nifJ; putative pyruvate-flavodoxin oxidoreductase (EC:1.2.7.-)
Pyruvate-flavodoxin oxidoreductase n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TIZ1_9BACE
L3_105_245G1_scaffold_158_16
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24713..25882)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1YS58_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN25775.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_105_245G1_scaffold_158_17
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26023..26463)
DNA (441bp) protein (147aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1YS59_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK63390.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L3_105_245G1_scaffold_158_18
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26806..27639
DNA (834bp) protein (278aa)
Cof-like hydrolase n=2 Tax=Parabacteroides RepID=K5ZG02_9PORP
Cof-like hydrolase {ECO:0000313|EMBL:EKN25777.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_105_245G1_scaffold_158_19
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27674..28216
DNA (543bp) protein (181aa)
Carbonate dehydratase {ECO:0000313|EMBL:EEU51570.1}; EC=4.2.1.1 {ECO:0000313|EMBL:EEU51570.1};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Carbonate dehydratase n=5 Tax=Bacteroidales RepID=C7X8P1_9PORP
carbonic anhydrase
L3_105_245G1_scaffold_158_20
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28403..28564
DNA (162bp) protein (54aa)
Uncharacterized protein n=8 Tax=Bacteroidales RepID=C7X8P2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU51571.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L3_105_245G1_scaffold_158_21
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28799..29803
DNA (1005bp) protein (335aa)
Peptidase, M28 family {ECO:0000313|EMBL:EEY81693.1}; EC=3.4.-.- {ECO:0000313|EMBL:EEY81693.1};; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
Peptidase, M28 family n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TIZ7_9BACE
aminopeptidase
L3_105_245G1_scaffold_158_22
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30318..33488
DNA (3171bp) protein (1057aa)
TonB-linked outer membrane protein, SusC/RagA family n=4 Tax=Bacteroidales RepID=C7X8P4_9PORP
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EFK63396.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L3_105_245G1_scaffold_158_23
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33497..35440
DNA (1944bp) protein (648aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=C7X8P5_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU51574.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
hypothetical protein
L3_105_245G1_scaffold_158_24
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35846..39013
DNA (3168bp) protein (1056aa)
TonB-linked outer membrane protein, SusC/RagA family n=3 Tax=Bacteroidales RepID=D0TJ00_9BACE
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EEY81696.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein
L3_105_245G1_scaffold_158_25
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

39055..40974
DNA (1920bp) protein (640aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=K6AEY4_9PORP
Susd and RagB outer membrane lipofamily protein {ECO:0000313|EMBL:KDS54079.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
hypothetical protein
L3_105_245G1_scaffold_158_26
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

41097..42245
DNA (1149bp) protein (383aa)
Tat pathway signal sequence domain protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TJ02_9BACE
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EEY81698.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
hypothetical protein
L3_105_245G1_scaffold_158_27
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

42242..43006
DNA (765bp) protein (255aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1YS70_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK63401.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_105_245G1_scaffold_158_28
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(43017..43823)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TJ04_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEY81700.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
xylanase
L3_105_245G1_scaffold_158_29
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(43992..44873)
DNA (882bp) protein (294aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
Malonyl CoA-acyl carrier protein transacylase n=3 Tax=Bacteroidales RepID=D0TJ05_9BACE
malonyl CoA-acyl carrier protein transacylase
L3_105_245G1_scaffold_158_30
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

45013..45207
DNA (195bp) protein (65aa)
Sec-independent protein translocase protein TatA n=9 Tax=Bacteroidales RepID=A6LCU2_PARD8
Sec-independent protein translocase
Sec-independent protein translocase protein TatA {ECO:0000256|HAMAP-Rule:MF_00236}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
Displaying items 1-30 of 57 in total

View Taxonomy