ggKbase home page

L3_105_245G1_scaffold_162

Search features with annotation key words

Displaying items 1-30 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_245G1_scaffold_162_1
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(104..685)
DNA (582bp) protein (194aa)
Toxin-antitoxin system, toxin component, Bro family n=2 Tax=Bacteroidales RepID=D7IQ56_9BACE
BRO family, N-terminal domain protein {ECO:0000313|EMBL:KDS68438.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
prophage antirepressor
L3_105_245G1_scaffold_162_2
Vibrio phage ICP1, Caudovirales, Viruses

Not on your lists

comp(682..1587)
DNA (906bp) protein (302aa)
Cytosine-specific methyltransferase n=2 Tax=Vibrio phage ICP1 RepID=F1D2C9_9CAUD
Putative DNA-methyltransferase, type II restriction-modification system (Enterobacteria phage RB16) {ECO:0000313|EMBL:ADX88500.1}; TaxID=979531 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Myoviridae.;" source="Vibrio phage ICP1_2006_C.;"
Type II restriction-modification system methylation subunit
L3_105_245G1_scaffold_162_3
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1584..1826)
DNA (243bp) protein (81aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K6B436_9PORP
Putative uncharacterized protein {ECO:0000313|EMBL:EFI09543.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_105_245G1_scaffold_162_4
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1823..2098)
DNA (276bp) protein (92aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K6A486_9PORP
Putative uncharacterized protein {ECO:0000313|EMBL:EFI09542.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_105_245G1_scaffold_162_5
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2155..3402)
DNA (1248bp) protein (416aa)
Phage antirepressor protein n=2 Tax=Bacteroidales RepID=D7IQ53_9BACE
Phage antirepressor KilAC domain protein {ECO:0000313|EMBL:KDS68443.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
hypothetical protein
L3_105_245G1_scaffold_162_6
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3386..4162)
DNA (777bp) protein (259aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2B740_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EOS16746.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
hypothetical protein
L3_105_245G1_scaffold_162_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(4187..4633)
DNA (447bp) protein (149aa)
dut; dUTPase (EC:3.6.1.23)
deoxyuridine 5''''-triphosphate nucleotidohydrolase n=1 Tax=Flavobacterium sp. SCGC AAA160-P02 RepID=UPI00037E6D56
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
L3_105_245G1_scaffold_162_8
Alistipes putredinis, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4608..4973)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Alistipes putredinis DSM 17216 RepID=B0MZL4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDS03050.1}; TaxID=445970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes putredinis DSM 17216.;"
hypothetical protein
L3_105_245G1_scaffold_162_9
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4984..5403)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Bacteroides gallinarum RepID=UPI00036C1FDD
Uncharacterized protein {ECO:0000313|EMBL:EYB11952.1}; TaxID=1339310 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 3783N1-6.;"
L3_105_245G1_scaffold_162_10
Tannerella sp. CAG:51, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5407..5853)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Tannerella sp. CAG:51 RepID=R7DHA4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CDD89780.1}; TaxID=1262979 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tannerella sp. CAG:51.;"
L3_105_245G1_scaffold_162_11
unknown

Not on your lists

comp(5853..6398)
DNA (546bp) protein (182aa)

This feature has no annotations

L3_105_245G1_scaffold_162_12
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6729..8090
DNA (1362bp) protein (454aa)
hypothetical protein n=1 Tax=Bacteroides gallinarum RepID=UPI0003754051
Uncharacterized protein {ECO:0000313|EMBL:KDS68437.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
hypothetical protein
L3_105_245G1_scaffold_162_13
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8068..8889
DNA (822bp) protein (274aa)
Phage Mu protein F like protein domain-containing protein n=2 Tax=Bacteroidales RepID=D7IQ52_9BACE
Phage Mu F like family protein {ECO:0000313|EMBL:KDS68499.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
hypothetical protein
L3_105_245G1_scaffold_162_14
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8886..9356
DNA (471bp) protein (157aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K6B440_9PORP
Putative uncharacterized protein {ECO:0000313|EMBL:EFI09539.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_105_245G1_scaffold_162_15
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9353..10312
DNA (960bp) protein (320aa)
Glycosyl hydrolase, family 31/fibronectin type III domain protein n=2 Tax=Bacteroidales RepID=D7IQ50_9BACE
Bacterial Ig-like domain family protein {ECO:0000313|EMBL:KDS68479.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
hypothetical protein
L3_105_245G1_scaffold_162_16
Parabacteroides sp. HGS0025, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10305..11927
DNA (1623bp) protein (541aa)
hypothetical protein n=1 Tax=Bacteroides gallinarum RepID=UPI000379C9EF
Uncharacterized protein {ECO:0000313|EMBL:KKB45132.1}; TaxID=1078087 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. HGS0025.;"
phage pre-neck appendage-like protein
L3_105_245G1_scaffold_162_17
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11945..13141
DNA (1197bp) protein (399aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K6AGI4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KDS68456.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
hypothetical protein
L3_105_245G1_scaffold_162_18
unknown

Not on your lists

13143..13832
DNA (690bp) protein (230aa)

This feature has no annotations

L3_105_245G1_scaffold_162_19
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13829..16201
DNA (2373bp) protein (791aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K6AGI4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KDS68456.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
virion structural protein
L3_105_245G1_scaffold_162_20
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16295..17647
DNA (1353bp) protein (451aa)
ATP-dependent Clp protease proteolytic subunit 2 (Endopeptidase Clp 2) n=2 Tax=Bacteroidales RepID=D7IQ43_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KEJ87097.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
Prophage Clp protease-like protein
L3_105_245G1_scaffold_162_21
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17679..18707
DNA (1029bp) protein (343aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K5Z7M8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KDS68497.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
hypothetical protein
L3_105_245G1_scaffold_162_22
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18781..19074
DNA (294bp) protein (98aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IQ41_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS68509.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
L3_105_245G1_scaffold_162_23
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19078..20361
DNA (1284bp) protein (428aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K6B450_9PORP
Putative uncharacterized protein {ECO:0000313|EMBL:EFI09528.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_105_245G1_scaffold_162_24
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

20373..20819
DNA (447bp) protein (149aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K6A499_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KDS68448.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
hypothetical protein
L3_105_245G1_scaffold_162_25
Pseudomonas sp. P482, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20959..22869
DNA (1911bp) protein (637aa)
Tpr repeat-containing protein n=1 Tax=Shewanella decolorationis S12 RepID=V1DH03_9GAMM
Glycosyl transferases group 1 family protein {ECO:0000313|EMBL:KDO00427.1}; TaxID=1460691 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. P482.;"
glycosyl transferase group 1
L3_105_245G1_scaffold_162_26
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22987..23370
DNA (384bp) protein (128aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K6AGW0_9PORP
Putative uncharacterized protein {ECO:0000313|EMBL:EFI09526.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_105_245G1_scaffold_162_27
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23658..26552
DNA (2895bp) protein (965aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K5Z7N1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ87104.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
Transcription-repair coupling factor
L3_105_245G1_scaffold_162_28
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26552..27595
DNA (1044bp) protein (348aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K6B452_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ87105.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_105_245G1_scaffold_162_29
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27595..28848
DNA (1254bp) protein (418aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K6A4A3_9PORP
Putative uncharacterized protein {ECO:0000313|EMBL:EFI09524.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_105_245G1_scaffold_162_30
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28848..29651
DNA (804bp) protein (268aa)
Uncharacterized protein n=2 Tax=Bacteroidales RepID=K6AGW3_9PORP
Putative uncharacterized protein {ECO:0000313|EMBL:EFI09523.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
Displaying items 1-30 of 78 in total

View Taxonomy