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L3_105_245G1_scaffold_197

Search features with annotation key words

Displaying items 1-30 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_245G1_scaffold_197_1
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(148..516)
DNA (369bp) protein (123aa)
Uncharacterized protein n=4 Tax=Clostridiales RepID=N2A7P0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO82518.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
Helix-turn-helix domain protein
L3_105_245G1_scaffold_197_2
Eubacterium sp. 3_1_31, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

737..1429
DNA (693bp) protein (231aa)
Response regulator receiver domain protein n=2 Tax=Lachnospiraceae RepID=C6LDB9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO82517.1}; TaxID=457402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 3_1_31.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_105_245G1_scaffold_197_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1426..2457
DNA (1032bp) protein (344aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SHG2_9FIRM
His Kinase A (phosphoacceptor) domain./Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
L3_105_245G1_scaffold_197_4
Eubacterium ventriosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2745..3410
DNA (666bp) protein (222aa)
ABC transporter, ATP-binding protein n=4 Tax=Clostridiales RepID=A5Z6V2_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDM51108.1}; TaxID=411463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium ventriosum ATCC 27560.;"
ABC-type antimicrobial peptide transport system, ATPase component
L3_105_245G1_scaffold_197_5
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3425..5797
DNA (2373bp) protein (791aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BYD9_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD20134.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
permease
L3_105_245G1_scaffold_197_6

Not on your lists

5976..6233
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=human gut metagenome RepID=K1UIH8_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EKC79839.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_105_245G1_scaffold_197_7
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6494..6877
DNA (384bp) protein (128aa)
Transcriptional regulator, GntR family n=8 Tax=root RepID=D4LTR7_9FIRM
transcriptional regulator, GntR family
Transcriptional regulator, GntR family {ECO:0000313|EMBL:CBL24175.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L3_105_245G1_scaffold_197_8
Marvinbryantia formatexigens, Marvinbryantia, Clostridiales, Clostridia, Firmicutes, Bacteria

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6870..7730
DNA (861bp) protein (287aa)
ABC transporter, ATP-binding protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LDD0_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EET61364.1}; TaxID=478749 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Marvinbryantia.;" source="Marvinbryantia formatexigens DSM 14469.;"
ABC-type multidrug transport system, ATPase component
L3_105_245G1_scaffold_197_9
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7723..8373
DNA (651bp) protein (217aa)
Uncharacterized protein n=3 Tax=root RepID=K1TVW9_9ZZZZ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL24173.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L3_105_245G1_scaffold_197_10
Blautia obeum, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8383..8496
DNA (114bp) protein (38aa)
Putative uncharacterized protein n=1 Tax=Ruminococcus obeum A2-162 RepID=D4LTR4_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL24172.1}; TaxID=657314 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia obeum A2-162.;"
L3_105_245G1_scaffold_197_11
[Eubacterium] siraeum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8769..9410
DNA (642bp) protein (214aa)
ABC-type antimicrobial peptide transport system, ATPase component n=1 Tax=Eubacterium siraeum V10Sc8a RepID=D4ML01_9FIRM
ABC-type antimicrobial peptide transport system, ATPase component
ABC-type antimicrobial peptide transport system, ATPase component {ECO:0000313|EMBL:CBL34434.1}; TaxID=717961 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Eubacterium] siraeum V10Sc8a.;"
L3_105_245G1_scaffold_197_12
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9305..10702)
DNA (1398bp) protein (466aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K2B8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS40595.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
Site-specific recombinases, DNA invertase Pin homologs
L3_105_245G1_scaffold_197_13
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10816..11655)
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K2L4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS40593.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
hypothetical protein
L3_105_245G1_scaffold_197_14
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11892..12356)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2AS44_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ32107.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
transcriptional regulator
L3_105_245G1_scaffold_197_15
unknown

Not on your lists

12545..12724
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2B072_9CLOT
L3_105_245G1_scaffold_197_16
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12739..12876
DNA (138bp) protein (46aa)
Putative uncharacterized protein n=1 Tax=Roseburia intestinalis M50/1 RepID=D4KNR2_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL08514.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
L3_105_245G1_scaffold_197_17
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12985..13992
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2B5Y3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ32099.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
hypothetical protein
L3_105_245G1_scaffold_197_18
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14355..15350
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K2J9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS40578.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
hypothetical protein
L3_105_245G1_scaffold_197_19
Eubacterium sp. CAG:76, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15388..16020
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:76 RepID=R7NBC2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDF09403.1}; TaxID=1262892 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium sp. CAG:76.;"
Transglycosylase SLT domain.
L3_105_245G1_scaffold_197_20
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16014..16343
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YY51_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD36279.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
L3_105_245G1_scaffold_197_21
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16349..16732
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K296_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS40575.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
hypothetical protein
L3_105_245G1_scaffold_197_22
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16738..17310
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K2V0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS40571.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
hypothetical protein
L3_105_245G1_scaffold_197_23
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17310..17702
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2B5X6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ32089.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
hypothetical protein
L3_105_245G1_scaffold_197_24
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17702..18928
DNA (1227bp) protein (409aa)
Phosphoadenosine phosphosulfate reductase family protein n=1 Tax=Clostridium scindens ATCC 35704 RepID=B0NA38_CLOSV
Phosphoadenosine phosphosulfate reductase family protein {ECO:0000313|EMBL:EDS08531.1}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
putative aminotransferase, class V
L3_105_245G1_scaffold_197_25
Clostridium sp. ASF502, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18925..19293
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ASF502 RepID=N2B124_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EMZ32090.1}; TaxID=97139 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASF502.;"
hypothetical protein
L3_105_245G1_scaffold_197_26
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19286..19900
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YY47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD36274.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
HD domain.
L3_105_245G1_scaffold_197_27
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19893..20297
DNA (405bp) protein (135aa)
VRR-NUC domain-containing protein n=1 Tax=Roseburia sp. CAG:309 RepID=R6YK17_9FIRM
VRR-NUC domain-containing protein {ECO:0000313|EMBL:CDD36273.1}; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:309.;"
VRR-NUC domain.
L3_105_245G1_scaffold_197_28
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20298..20597
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K2I5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS40563.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
L3_105_245G1_scaffold_197_29
Lachnospiraceae bacterium M18-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20594..20848
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium M18-1 RepID=R9K2U3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS40561.1}; TaxID=1235792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium M18-1.;"
L3_105_245G1_scaffold_197_30
unknown

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20936..21139
DNA (204bp) protein (68aa)

This feature has no annotations

Displaying items 1-30 of 91 in total

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