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L3_105_245G1_scaffold_280

Search features with annotation key words

Displaying items 1-30 of 48 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_245G1_scaffold_280_1
unknown

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2..187
DNA (186bp) protein (62aa)

This feature has no annotations

L3_105_245G1_scaffold_280_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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177..812
DNA (636bp) protein (212aa)
Cyclic nucleotide-binding domain protein n=4 Tax=Firmicutes RepID=E4LRB1_9CLOT
Cyclic nucleotide-binding domain protein {ECO:0000313|EMBL:EQJ62927.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
cyclic nucleotide-binding protein
L3_105_245G1_scaffold_280_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1182..2192)
DNA (1011bp) protein (337aa)
Oxidoreductase, NAD-binding domain protein n=4 Tax=Firmicutes RepID=E4LRB2_9CLOT
Oxidoreductase , NAD-binding Rossmann fold family protein {ECO:0000313|EMBL:EQJ62928.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
oxidoreductase domain-containing protein
L3_105_245G1_scaffold_280_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2316..3704)
DNA (1389bp) protein (463aa)
PTS system Galactitol-specific IIC component n=4 Tax=Firmicutes RepID=E4LRB3_9CLOT
PTS system sugar-specific permease component family protein {ECO:0000313|EMBL:EQJ62929.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
sgcC; hypothetical protein
L3_105_245G1_scaffold_280_5
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3733..4008)
DNA (276bp) protein (92aa)
PTS system, Lactose/Cellobiose specific IIB subunit {ECO:0000313|EMBL:EFR38673.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EFR38673.1};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
PTS system, Lactose/Cellobiose specific IIB subunit n=4 Tax=Firmicutes RepID=E4LRB4_9CLOT
PTS system lactose/cellobiose-specific transporter subunit IIB
L3_105_245G1_scaffold_280_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4030..4500)
DNA (471bp) protein (157aa)
PTS system transporter subunit IIA (EC:2.7.1.69)
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 n=4 Tax=Firmicutes RepID=E4LRB5_9CLOT
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 family protein {ECO:0000313|EMBL:EQJ62931.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_105_245G1_scaffold_280_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4469..4960)
DNA (492bp) protein (164aa)
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 n=4 Tax=Firmicutes RepID=E4LRB6_9CLOT
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 family protein {ECO:0000313|EMBL:EQJ62932.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
ptsN1; phosphotransferase enzyme II, A component
L3_105_245G1_scaffold_280_8
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5085..7109)
DNA (2025bp) protein (675aa)
PRD domain protein n=2 Tax=Clostridiales RepID=E4LRB7_9CLOT
PRD domain protein {ECO:0000313|EMBL:EFR38712.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
putative PRD domain protein
L3_105_245G1_scaffold_280_9
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7301..8902
DNA (1602bp) protein (534aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1B327_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:KGJ52360.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
cell envelope-related function transcriptional attenuator common domain
L3_105_245G1_scaffold_280_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9100..10335)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LRB9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ62935.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_105_245G1_scaffold_280_11
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(10377..11057)
DNA (681bp) protein (227aa)
Uncharacterized protein n=3 Tax=unclassified Erysipelotrichaceae RepID=G1VT61_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY87526.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L3_105_245G1_scaffold_280_12
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11098..12255)
DNA (1158bp) protein (386aa)
Threonine/alanine tRNA ligase second additional domain protein n=5 Tax=Firmicutes RepID=E4LRC1_9CLOT
Threonine/alanine tRNA ligase second additional domain protein {ECO:0000313|EMBL:EFR38771.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
DHH domain-containing protein
L3_105_245G1_scaffold_280_13
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12380..13261
DNA (882bp) protein (294aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=E4LRC2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC86433.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L3_105_245G1_scaffold_280_14
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13465..13947)
DNA (483bp) protein (161aa)
ndk; nucleoside diphosphate kinase Ndk (EC:2.7.4.6)
Nucleoside diphosphate kinase domain protein n=5 Tax=Firmicutes RepID=E4LRC3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC86434.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_105_245G1_scaffold_280_15
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14026..15789)
DNA (1764bp) protein (588aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
Methylenetetrahydrofolate reductase n=2 Tax=Firmicutes RepID=E4LRC4_9CLOT
homocysteine S-methyltransferase
L3_105_245G1_scaffold_280_16
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15786..18146)
DNA (2361bp) protein (787aa)
Methylmalonyl-CoA mutase domain-containing protein n=3 Tax=Firmicutes RepID=H1BEJ8_9FIRM
Putative 5-methyltetrahydrofolate--homocysteine methyltransferase {ECO:0000313|EMBL:EFR38756.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
5-methyltetrahydrofolate--homocysteine methyltransferase
L3_105_245G1_scaffold_280_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18136..18795)
DNA (660bp) protein (220aa)
Vitamin B12 dependent methionine synthase, activation domain protein n=5 Tax=Firmicutes RepID=E4LRC6_9CLOT
Vitamin B12 dependent methionine synthase, activation domain protein {ECO:0000313|EMBL:EQJ62942.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
5-methyltetrahydrofolate--homocysteine methyltransferase
L3_105_245G1_scaffold_280_18
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18865..19056)
DNA (192bp) protein (64aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=H1B336_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC86438.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_105_245G1_scaffold_280_19
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19149..20006)
DNA (858bp) protein (286aa)
Phospholipase, patatin family n=5 Tax=Firmicutes RepID=E4LRC7_9CLOT
Phospholipase, patatin family {ECO:0000313|EMBL:EFR38762.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
phospholipase, patatin family
L3_105_245G1_scaffold_280_20
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20197..20589)
DNA (393bp) protein (131aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=E4LRC8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC86440.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_105_245G1_scaffold_280_21
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(20696..23209)
DNA (2514bp) protein (838aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=E4LRC9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC86441.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
RDD domain-containing protein
L3_105_245G1_scaffold_280_22
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23206..23748)
DNA (543bp) protein (181aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=E4LRD0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC86442.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_105_245G1_scaffold_280_23
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23894..25066)
DNA (1173bp) protein (391aa)
Transcriptional regulatory protein, C-terminal domain protein n=4 Tax=Firmicutes RepID=E4LRD1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC86443.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
Transcriptional regulatory protein, C terminal./Bacterial transcriptional activator domain.
L3_105_245G1_scaffold_280_24
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25479..27017)
DNA (1539bp) protein (513aa)
Phospholipase D domain protein {ECO:0000313|EMBL:EFR38813.1}; EC=3.1.-.- {ECO:0000313|EMBL:EFR38813.1};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
cls; cardiolipin synthetase (EC:2.7.8.-)
Phospholipase D domain protein n=4 Tax=Firmicutes RepID=E4LRD2_9CLOT
L3_105_245G1_scaffold_280_25
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(27035..27988)
DNA (954bp) protein (318aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=E4LRD3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC86445.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_105_245G1_scaffold_280_26
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28280..33103)
DNA (4824bp) protein (1608aa)
fructan beta-fructosidase (EC:3.2.1.80)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LRD4_9CLOT
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:EFR38670.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L3_105_245G1_scaffold_280_27
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(33257..33934)
DNA (678bp) protein (226aa)
Response regulator receiver domain protein n=5 Tax=Firmicutes RepID=E4LQU9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC86448.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
L3_105_245G1_scaffold_280_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33988..34161)
DNA (174bp) protein (58aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=E4LQV0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ50767.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_105_245G1_scaffold_280_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34439..35101)
DNA (663bp) protein (221aa)
Bacterial regulatory s, gntR family protein n=1 Tax=Clostridium difficile P28 RepID=T4N555_CLODI
Bacterial regulatory s, gntR family protein {ECO:0000313|EMBL:EQJ50766.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
GntR family transcriptional regulator
L3_105_245G1_scaffold_280_30
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35123..36208)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=E4LQV2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR38653.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
Displaying items 1-30 of 48 in total

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