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L3_105_245G1_scaffold_305

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Displaying items 1-30 of 39 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_245G1_scaffold_305_1
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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45..839
DNA (795bp) protein (265aa)
PRD domain protein n=5 Tax=Firmicutes RepID=E4LNM5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO29644.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
sigma-54 interacting domain-containing protein
L3_105_245G1_scaffold_305_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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840..1259
DNA (420bp) protein (140aa)
PTS system fructose IIA component n=5 Tax=Firmicutes RepID=E4LNM4_9CLOT
PTS system fructose IIA component family protein {ECO:0000313|EMBL:EQJ63765.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
PTS system fructose subfamily transporter subunit IIA
L3_105_245G1_scaffold_305_3
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

1272..1736
DNA (465bp) protein (155aa)
PTS system sorbose subfamily IIB component n=6 Tax=Firmicutes RepID=E4LNM3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY87421.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
manX; putative N-phosphohistidine--sugar phosphotransferase
L3_105_245G1_scaffold_305_4
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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1757..2521
DNA (765bp) protein (255aa)
PTS system mannose-specific transporter subunit IIC (EC:2.7.1.69)
PTS system sorbose-specific iic component n=7 Tax=Firmicutes RepID=E4LNM2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC81773.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_105_245G1_scaffold_305_5
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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2505..3320
DNA (816bp) protein (272aa)
PTS system mannose/fructose/sorbose family IID component n=2 Tax=Firmicutes RepID=R6UB41_9FIRM
PTS system mannose/fructose/sorbose family IID component {ECO:0000313|EMBL:CDC81775.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
PTS system mannose/fructose/sorbose family transporter subunit IID
L3_105_245G1_scaffold_305_6
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

3329..3973
DNA (645bp) protein (215aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=H1AW83_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY87425.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
hypothetical protein
L3_105_245G1_scaffold_305_7
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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4373..4600
DNA (228bp) protein (76aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=E4LNL9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY86338.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
hypothetical protein
L3_105_245G1_scaffold_305_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4621..4929
DNA (309bp) protein (103aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=H1AW46_9FIRM
Putative AAA-ATPase family protein {ECO:0000313|EMBL:EQJ63759.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_105_245G1_scaffold_305_9
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4881..5312
DNA (432bp) protein (144aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=E4LNL7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR39604.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Predicted transcriptional regulators
L3_105_245G1_scaffold_305_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5309..6061
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4P1X5_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ63758.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Predicted transcriptional regulators
L3_105_245G1_scaffold_305_11
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

6464..7480
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1AW45_9FIRM
Transcriptional regulator {ECO:0000313|EMBL:KGJ52888.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
transcriptional regulator/sugar kinase
L3_105_245G1_scaffold_305_12
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

7477..8364
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1AW44_9FIRM
Histidinol phosphatase {ECO:0000313|EMBL:KGJ52889.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
putative metal-dependent phosphoesterase
L3_105_245G1_scaffold_305_13
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8482..9399)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1AW43_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFR39607.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L3_105_245G1_scaffold_305_14
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

10095..10535
DNA (441bp) protein (147aa)
PTS system, glucose subfamily, IIA component n=7 Tax=Firmicutes RepID=E4LNL2_9CLOT
PTS system, glucose subfamily, IIA component {ECO:0000313|EMBL:ENY86345.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
PTS system, beta-glucoside-specific IIABC component
L3_105_245G1_scaffold_305_15
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10548..11387
DNA (840bp) protein (280aa)
Transcription antiterminator LicT n=2 Tax=Firmicutes RepID=E4LNL1_9CLOT
Transcription antiterminator LicT {ECO:0000313|EMBL:EFR39627.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
licT; BigG family transcription antiterminator
L3_105_245G1_scaffold_305_16
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11728..13113
DNA (1386bp) protein (462aa)
Protein-N(pi)-phosphohistidine--sugar phosphotransferase (EC:2.7.1.69)
Phosphotransferase system, EIIC n=3 Tax=Firmicutes RepID=E4LNL0_9CLOT
Phosphotransferase system, EIIC {ECO:0000313|EMBL:EFR39625.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L3_105_245G1_scaffold_305_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13204..14643
DNA (1440bp) protein (480aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=R6U7X0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQJ63749.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
microcystin LR degradation protein MlrC-like protein
L3_105_245G1_scaffold_305_18
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14691..16133
DNA (1443bp) protein (481aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1AW38_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC81816.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
microcystin LR degradation protein MlrC-like protein
L3_105_245G1_scaffold_305_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16189..17562
DNA (1374bp) protein (458aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=H1AW37_9FIRM
Metallopeptidase M24 family protein {ECO:0000313|EMBL:EQJ63747.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_105_245G1_scaffold_305_20
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17593..18405
DNA (813bp) protein (271aa)
Cof-like hydrolase n=3 Tax=Firmicutes RepID=E4LNK6_9CLOT
Cof-like hydrolase {ECO:0000313|EMBL:EFR39592.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Predicted hydrolases of the HAD superfamily
L3_105_245G1_scaffold_305_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18402..19070
DNA (669bp) protein (223aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LNK5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ63745.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_105_245G1_scaffold_305_22
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19149..20573
DNA (1425bp) protein (475aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=H1AW34_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO29623.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
glycoside hydrolase
L3_105_245G1_scaffold_305_23
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20950..22449)
DNA (1500bp) protein (500aa)
Carboxypeptidase Taq (M32) metallopeptidase {ECO:0000313|EMBL:EFR39580.1}; EC=3.4.17.19 {ECO:0000313|EMBL:EFR39580.1};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
ypwA; Putative metalloprotease YpwA (EC:3.4.24.-)
Carboxypeptidase Taq (M32) metallopeptidase n=3 Tax=Firmicutes RepID=E4LNK2_9CLOT
L3_105_245G1_scaffold_305_24
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22839..23477
DNA (639bp) protein (213aa)
HAD hydrolase, family IA, variant 3 n=4 Tax=Firmicutes RepID=E4LNK1_9CLOT
HAD hydrolase, family IA, variant 3 {ECO:0000313|EMBL:EFR39583.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
L3_105_245G1_scaffold_305_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23480..24277
DNA (798bp) protein (266aa)
Phosphomethylpyrimidine kinase {ECO:0000313|EMBL:EQJ63741.1}; EC=2.7.4.7 {ECO:0000313|EMBL:EQJ63741.1};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
phosphomethylpyrimidine kinase (EC:2.7.4.7)
Phosphomethylpyrimidine kinase n=3 Tax=Firmicutes RepID=H1B7X2_9FIRM
L3_105_245G1_scaffold_305_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24523..26205
DNA (1683bp) protein (561aa)
Diguanylate cyclase (GGDEF) domain protein n=4 Tax=Firmicutes RepID=E4LNJ9_9CLOT
Diguanylate cyclase domain protein {ECO:0000313|EMBL:EQJ63740.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
diguanylate cyclase (GGDEF) domain
L3_105_245G1_scaffold_305_27
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26553..27371)
DNA (819bp) protein (273aa)
Uncharacterized protein n=2 Tax=Erysipelotrichaceae RepID=H1AW29_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC81837.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
PTS system mannose/fructose/sorbose family transporter subunit IID
L3_105_245G1_scaffold_305_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27368..28144)
DNA (777bp) protein (259aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 21_3 RepID=H1AW28_9FIRM
PTS system sorbose-specific iic component family protein {ECO:0000313|EMBL:EQJ63738.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
PTS sorbose-specific transporter subunit IIC
L3_105_245G1_scaffold_305_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28161..28643)
DNA (483bp) protein (161aa)
Fructose-specific phosphotransferase enzyme IIB component n=4 Tax=Firmicutes RepID=E4LNJ6_9CLOT
PTS system sorbose subIIB component family protein {ECO:0000313|EMBL:EQJ63737.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
PTS sugar transporter
L3_105_245G1_scaffold_305_30
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(28633..29070)
DNA (438bp) protein (146aa)
PTS system, mannose/fructose/sorbose family, IIA component n=4 Tax=Firmicutes RepID=H1AW26_9FIRM
PTS system mannose/fructose/sorbose family IIA component {ECO:0000313|EMBL:CDC81847.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
PTS system, IIa component
Displaying items 1-30 of 39 in total

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