ggKbase home page

L3_105_245G1_scaffold_322

Search features with annotation key words

Displaying items 1-30 of 62 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_245G1_scaffold_322_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..540)
DNA (540bp) protein (180aa)
Tail assembly protein I n=2 Tax=Escherichia coli RepID=K3FZE3_ECOLX
Phage tail protein {ECO:0000313|EMBL:EQX57684.1}; TaxID=1281204 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3174-1.;"
putative tail component of phage
L3_105_245G1_scaffold_322_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(537..1136)
DNA (600bp) protein (200aa)
Tail assembly protein n=3 Tax=Escherichia coli RepID=K3FZP4_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EMX49620.1}; TaxID=1116139 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP020980.2.;"
tail assembly protein k
L3_105_245G1_scaffold_322_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1286..1984)
DNA (699bp) protein (233aa)
Phage minor tail protein L n=169 Tax=Enterobacteriaceae RepID=B1IR62_ECOLC
minor tail protein
Phage minor tail protein L {ECO:0000313|EMBL:AEE56576.1}; TaxID=696406 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMNK88.;"
L3_105_245G1_scaffold_322_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1984..2313)
DNA (330bp) protein (110aa)
Minor tail protein n=2 Tax=Escherichia coli RepID=E8IVW4_ECOLX
Phage minor tail protein {ECO:0000313|EMBL:EGB64762.1}; TaxID=656429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli TA007.;"
minor tail protein
L3_105_245G1_scaffold_322_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2310..4871)
DNA (2562bp) protein (854aa)
Tail tape measure protein H n=1 Tax=Escherichia coli 5905 RepID=K3F390_ECOLX
Lambda family phage tail tape measure protein {ECO:0000313|EMBL:ETY48374.1}; TaxID=1328434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli BWH 40.;"
putative phage tail component
L3_105_245G1_scaffold_322_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4864..5298)
DNA (435bp) protein (145aa)
Phage tail assembly protein T n=2 Tax=Escherichia coli RepID=T5MKB9_ECOLX
Tail protein {ECO:0000313|EMBL:KDV39154.1}; TaxID=1446599 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O146:H21 str. 2010C-3325.;"
T; tail component
L3_105_245G1_scaffold_322_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5280..5702)
DNA (423bp) protein (141aa)
Phage minor tail protein G n=6 Tax=Escherichia coli RepID=G2CV89_ECOLX
Phage minor tail protein G {ECO:0000313|EMBL:KEN82189.1}; TaxID=1444219 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-392-07_S4_C1.;"
Minor tail protein G
L3_105_245G1_scaffold_322_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5718..6458)
DNA (741bp) protein (247aa)
Major tail protein V n=1 Tax=Escherichia coli UMEA 3329-1 RepID=T9KJF8_ECOLX
Major tail protein V {ECO:0000313|EMBL:AJE54864.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Major tail protein V
L3_105_245G1_scaffold_322_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6466..6861)
DNA (396bp) protein (132aa)
Minor tail protein U n=367 Tax=root RepID=VMTU_LAMBD
minor tail U
Phage minor tail protein U {ECO:0000313|EMBL:EGI22869.1}; TaxID=656419 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli M718.;"
L3_105_245G1_scaffold_322_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6858..7436)
DNA (579bp) protein (193aa)
Minor tail protein Z n=6 Tax=Escherichia coli RepID=G2CV84_ECOLX
Minor tail protein Z {ECO:0000313|EMBL:AJE54862.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
phage minor tail protein
L3_105_245G1_scaffold_322_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7448..7801)
DNA (354bp) protein (118aa)
Tail attachment protein (Minor capsid protein FII) from bacteriophage origin n=163 Tax=Escherichia coli RepID=B7N9D4_ECOLU
fII; Tail attachment protein (Minor capsid protein FII) from bacteriophage origin
Phage Head-Tail Attachment {ECO:0000313|EMBL:EFU32326.1}; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 85-1.;"
L3_105_245G1_scaffold_322_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7813..8211)
DNA (399bp) protein (133aa)
DNA packaging protein FI n=15 Tax=Enterobacteriaceae RepID=E7JWD1_SHISO
DNA-packaging protein
Uncharacterized protein {ECO:0000313|EMBL:EQY33826.1}; TaxID=1281218 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3212-1.;"
L3_105_245G1_scaffold_322_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8253..9278)
DNA (1026bp) protein (342aa)
Major head protein n=6 Tax=Escherichia coli RepID=I4P8G6_ECOLX
major head protein
Major head protein {ECO:0000313|EMBL:EOQ68259.1}; TaxID=1169351 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE33.;"
L3_105_245G1_scaffold_322_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9334..9666)
DNA (333bp) protein (111aa)
Head decoration protein (Major capsid protein) n=124 Tax=Escherichia coli RepID=E2QKQ8_ECOLX
head decoration protein (Major capsid protein D) from bacteriophage origin
Head decoration protein (Major capsid protein D) from bacteriophage origin {ECO:0000313|EMBL:AEQ12601.1}; TaxID=1072459 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O7:K1 str. CE10.;"
L3_105_245G1_scaffold_322_15
Escherichia sp. KTE159, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9676..11007)
DNA (1332bp) protein (444aa)
Minor capsid protein C n=10 Tax=Escherichia coli RepID=L2ZAE4_ECOLX
Minor capsid protein C {ECO:0000313|EMBL:EOW66122.1}; TaxID=1182732 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia sp. KTE159.;"
Minor capsid protein
L3_105_245G1_scaffold_322_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10988..12589)
DNA (1602bp) protein (534aa)
Phage portal protein, lambda family n=1 Tax=Escherichia coli 907446 RepID=V0S041_ECOLX
phage portal protein, lambda family
Portal protein B {ECO:0000313|EMBL:ESP10578.1}; TaxID=1280986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 36 (4-5675286).;"
L3_105_245G1_scaffold_322_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12586..12792)
DNA (207bp) protein (69aa)
Lambda prophage-derived head-to-tail joining protein W n=703 Tax=root RepID=VHTJ_ECOL6
Lambda prophage-derived head-to-tail joining protein W
GpW {ECO:0000313|EMBL:EGI47277.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
L3_105_245G1_scaffold_322_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12789..14714)
DNA (1926bp) protein (642aa)
Phage DNA packaging protein large subunit n=25 Tax=Escherichia coli RepID=B6I0L4_ECOSE
Phage terminase large subunit {ECO:0000313|EMBL:EFF06855.2}; TaxID=550676 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B185.;"
phage DNA packaging protein large subunit
L3_105_245G1_scaffold_322_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14689..15234)
DNA (546bp) protein (182aa)
Bacteriophage DNA packaging protein n=135 Tax=Escherichia coli RepID=J7Q7P0_ECOLX
terminase small subunit
Phage DNA packaging protein Nu1 {ECO:0000313|EMBL:EFK26430.1}; TaxID=749547 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 187-1.;"
L3_105_245G1_scaffold_322_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15914..16324
DNA (411bp) protein (137aa)
Uncharacterized protein YdfO n=101 Tax=Escherichia RepID=YDFO_ECOLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGM61306.1}; TaxID=1455601 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli G3/10.;"
L3_105_245G1_scaffold_322_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16476..16649)
DNA (174bp) protein (58aa)
Protein GnsB n=247 Tax=Escherichia RepID=GNSB_ECOLI
hypothetical protein
GnsA/GnsB family protein {ECO:0000313|EMBL:KDZ16185.1}; TaxID=1444185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C3.;"
L3_105_245G1_scaffold_322_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16821..17090)
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Escherichia coli O44:H18 (strain 042 / EAEC) RepID=D3GSK7_ECO44
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBG34525.1}; TaxID=216592 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O44:H18 (strain 042 / EAEC).;"
L3_105_245G1_scaffold_322_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17323..17535)
DNA (213bp) protein (71aa)
Cold shock-like protein CspI n=449 Tax=Enterobacteriaceae RepID=CSPI_ECOL6
cold-shock protein
Cold shock-like protein CspG {ECO:0000313|EMBL:END92468.1}; TaxID=1125642 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.13.;"
L3_105_245G1_scaffold_322_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17898..18395)
DNA (498bp) protein (166aa)
Uncharacterized protein RzpQ n=322 Tax=Escherichia RepID=RZPQ_ECOLI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZE17018.1}; TaxID=1446580 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O123:H11 str. 2009C-3307.;"
L3_105_245G1_scaffold_322_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18392..18925)
DNA (534bp) protein (178aa)
Lysozyme {ECO:0000256|RuleBase:RU003788}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU003788};; TaxID=1444137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 3-020-07_S3_C1.;"
Probable lysozyme from lambdoid prophage Qin n=299 Tax=Escherichia RepID=LYSQ_ECOLI
ydfQ; putative lysozyme from lambdoid prophage Qin
L3_105_245G1_scaffold_322_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18922..19233)
DNA (312bp) protein (104aa)
Uncharacterized protein YdfR n=132 Tax=Escherichia RepID=YDFR_ECOLI
hypothetical protein
Phage protein {ECO:0000313|EMBL:EOV78810.1}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE70.;"
L3_105_245G1_scaffold_322_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19238..19444)
DNA (207bp) protein (69aa)
Lysis protein S homolog from lambdoid prophage Qin n=353 Tax=Escherichia RepID=ESSQ_ECOLI
Lysis S family protein
Putative S lysis protein Qin prophage {ECO:0000313|EMBL:CEK04980.1}; TaxID=244319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O26:H11.;"
L3_105_245G1_scaffold_322_28
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20207..20422)
DNA (216bp) protein (72aa)
Cold shock-like protein CspB n=304 Tax=Escherichia coli RepID=CSPB_ECOLI
Qin prophage; cold shock protein
Cold shock-like protein CspB {ECO:0000313|EMBL:ERA02400.1}; TaxID=1281269 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3718-1.;"
L3_105_245G1_scaffold_322_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20735..20935
DNA (201bp) protein (67aa)
Cold shock-like protein CspF n=323 Tax=Escherichia RepID=CSPF_ECOL6
putative cold shock protein
RNA chaperone, negative regulator of cspA transcription {ECO:0000313|EMBL:EMX19399.1}; TaxID=1116066 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.1.;"
L3_105_245G1_scaffold_322_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21357..22109)
DNA (753bp) protein (251aa)
Antitermination protein Q homolog from lambdoid prophage Qin n=157 Tax=Escherichia coli RepID=REQ2_ECOLI
quuQ; Qin prophage; antitermination protein Q
Phage antitermination protein {ECO:0000313|EMBL:EOV62952.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE64.;"
Displaying items 1-30 of 62 in total

View Taxonomy