ggKbase home page

L3_105_245G1_scaffold_335

Search features with annotation key words

Displaying items 1-30 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_245G1_scaffold_335_1
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

269..979
DNA (711bp) protein (237aa)
Conserved Plasmodium protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E668_9BACT
Conserved Plasmodium protein {ECO:0000313|EMBL:CDD97811.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
hypothetical protein
L3_105_245G1_scaffold_335_2
unknown

Not on your lists

comp(848..1441)
DNA (594bp) protein (198aa)

This feature has no annotations

L3_105_245G1_scaffold_335_3
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

1634..1924
DNA (291bp) protein (97aa)
PUR-alpha/beta/gamma DNA/RNA-binding n=3 Tax=Akkermansia RepID=B2UP77_AKKM8
PUR-alpha/beta/gamma DNA/RNA-binding protein
PUR-alpha/beta/gamma DNA/RNA-binding {ECO:0000313|EMBL:CDD95046.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
L3_105_245G1_scaffold_335_4
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

2178..3254
DNA (1077bp) protein (359aa)
Cobyrinic acid ac-diamide synthase n=1 Tax=Akkermansia muciniphila CAG:154 RepID=R6J5U1_9BACT
Cobyrinic acid ac-diamide synthase {ECO:0000313|EMBL:CDB56620.1}; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia muciniphila CAG:154.;"
Cobyrinic acid ac-diamide synthase
L3_105_245G1_scaffold_335_5
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

3397..4773
DNA (1377bp) protein (459aa)
MATE efflux family protein n=1 Tax=Akkermansia muciniphila CAG:154 RepID=R6JDC6_9BACT
MATE efflux family protein {ECO:0000313|EMBL:CDB56619.1}; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia muciniphila CAG:154.;"
MATE efflux family protein
L3_105_245G1_scaffold_335_6
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(4804..7584)
DNA (2781bp) protein (927aa)
Putative type III restriction system endonuclease n=1 Tax=Akkermansia muciniphila CAG:154 RepID=R6J1S4_9BACT
Putative type III restriction system endonuclease {ECO:0000313|EMBL:CDB56618.1}; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia muciniphila CAG:154.;"
hypothetical protein
L3_105_245G1_scaffold_335_7
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(7668..9185)
DNA (1518bp) protein (506aa)
Eco57I restriction endonuclease. (EC:2.1.1.72)
Site-specific DNA-methyltransferase (Adenine-specific) n=1 Tax=Akkermansia muciniphila CAG:154 RepID=R6K2Z5_9BACT
Site-specific DNA-methyltransferase (Adenine-specific) {ECO:0000313|EMBL:CDB56617.1}; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia muciniphila CAG:154.;"
L3_105_245G1_scaffold_335_8
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(9182..9820)
DNA (639bp) protein (213aa)
Uncharacterized protein n=1 Tax=Akkermansia muciniphila CAG:154 RepID=R6JFN9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDB56616.1}; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia muciniphila CAG:154.;"
type III restriction system methylase
L3_105_245G1_scaffold_335_9
Akkermansia muciniphila CAG:154, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

9972..11090
DNA (1119bp) protein (373aa)
Integrase family protein n=1 Tax=Akkermansia muciniphila CAG:154 RepID=R6J5T3_9BACT
Integrase family protein {ECO:0000313|EMBL:CDB56615.1}; TaxID=1263034 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia muciniphila CAG:154.;"
integrase
L3_105_245G1_scaffold_335_10
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(11211..12731)
DNA (1521bp) protein (507aa)
Methylmalonyl-CoA carboxytransferase (EC:2.1.3.1)
Methylmalonyl-CoA carboxytransferase n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E0G2_9BACT
Methylmalonyl-CoA carboxytransferase {ECO:0000313|EMBL:CDD95032.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
L3_105_245G1_scaffold_335_11
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(12838..14292)
DNA (1455bp) protein (485aa)
Phospholipase D/Transphosphatidylase n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DY21_9BACT
Phospholipase D/Transphosphatidylase {ECO:0000313|EMBL:CDD95031.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
cls; cardiolipin synthetase
L3_105_245G1_scaffold_335_12
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

14436..15251
DNA (816bp) protein (272aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
Thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DX58_9BACT
L3_105_245G1_scaffold_335_13
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

15273..15743
DNA (471bp) protein (157aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
Dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DYB9_9BACT
L3_105_245G1_scaffold_335_14
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(15851..18958)
DNA (3108bp) protein (1036aa)
Transporter hydrophobe/amphiphile efflux-1 (HAE1) family n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DX53_9BACT
Transporter hydrophobe/amphiphile efflux-1 (HAE1) family {ECO:0000313|EMBL:CDD95025.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
hydrophobe/amphiphile efflux-1 (HAE1) family transporter
L3_105_245G1_scaffold_335_15
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(18966..20099)
DNA (1134bp) protein (378aa)
Efflux transporter RND family MFP subunit n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DWP4_9BACT
Efflux transporter RND family MFP subunit {ECO:0000313|EMBL:CDD95024.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
RND family efflux transporter MFP subunit
L3_105_245G1_scaffold_335_16
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(20106..20576)
DNA (471bp) protein (157aa)
Transcriptional regulator MarR family n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DYB3_9BACT
Transcriptional regulator MarR family {ECO:0000313|EMBL:CDD95023.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
MarR family transcriptional regulator
L3_105_245G1_scaffold_335_17
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

21127..22167
DNA (1041bp) protein (347aa)
Dihydroorotase {ECO:0000256|SAAS:SAAS00189348}; EC=3.5.2.3 {ECO:0000256|SAAS:SAAS00189348};; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
dihydroorotase (EC:3.5.2.3)
Dihydroorotase homodimeric type n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E0E9_9BACT
L3_105_245G1_scaffold_335_18
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

22259..22888
DNA (630bp) protein (210aa)
Beta-lactamase domain protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DY10_9BACT
Beta-lactamase domain protein {ECO:0000313|EMBL:CDD95021.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
beta-lactamase
L3_105_245G1_scaffold_335_19
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

22950..24152
DNA (1203bp) protein (401aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DX48_9BACT
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:CDD95020.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
DEAD/DEAH box helicase
L3_105_245G1_scaffold_335_20
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

24197..24700
DNA (504bp) protein (168aa)
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4)
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DX43_9BACT
L3_105_245G1_scaffold_335_21
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(24804..25325)
DNA (522bp) protein (174aa)
Uncharacterized protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DWN2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD95014.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
hypothetical protein
L3_105_245G1_scaffold_335_22
Coprobacter fastidiosus, Coprobacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25693..26979)
DNA (1287bp) protein (429aa)
Uncharacterized protein n=3 Tax=Porphyromonadaceae RepID=K5ZB56_9PORP
Uncharacterized protein {ECO:0000313|EMBL:ERM90384.1}; TaxID=1349822 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Coprobacter.;" source="Coprobacter fastidiosus NSB1.;"
hypothetical protein
L3_105_245G1_scaffold_335_23
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26972..27811)
DNA (840bp) protein (280aa)
Pgi methylase id=1775885 bin=GWD2_Bacteroidetes_33_33 species=Porphyromonas gingivalis genus=Porphyromonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
modification methylase
Tax=GWD2_Bacteroidetes_33_33_curated
L3_105_245G1_scaffold_335_24
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(28600..30588)
DNA (1989bp) protein (663aa)
Beta-lactamase domain protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DY00_9BACT
Beta-lactamase domain protein {ECO:0000313|EMBL:CDD95011.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
Beta-lactamase-like
L3_105_245G1_scaffold_335_25
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

30937..31413
DNA (477bp) protein (159aa)
NUDIX hydrolase n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DX38_9BACT
NUDIX hydrolase {ECO:0000313|EMBL:CDD95010.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
NUDIX hydrolase
L3_105_245G1_scaffold_335_26
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(31388..32407)
DNA (1020bp) protein (340aa)
LAO/AO transport system ATPase n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DWM7_9BACT
LAO/AO transport system ATPase {ECO:0000313|EMBL:CDD95009.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
LAO/AO transporter ATPase
L3_105_245G1_scaffold_335_27
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(32424..33938)
DNA (1515bp) protein (505aa)
beta-N-acetylhexosaminidase (EC:3.2.1.52)
Beta-N-acetylhexosaminidase n=1 Tax=Akkermansia sp. CAG:344 RepID=R7DY97_9BACT
Beta-N-acetylhexosaminidase {ECO:0000313|EMBL:CDD95008.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
L3_105_245G1_scaffold_335_28
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(33973..35508)
DNA (1536bp) protein (512aa)
beta-N-acetylhexosaminidase (EC:3.2.1.52)
Beta-N-acetylhexosaminidase n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E0D4_9BACT
Beta-N-acetylhexosaminidase {ECO:0000313|EMBL:CDD95007.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
L3_105_245G1_scaffold_335_29
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(36153..36617)
DNA (465bp) protein (155aa)
Uncharacterized phage-associated protein-like protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E5T2_9BACT
Uncharacterized phage-associated protein-like protein {ECO:0000313|EMBL:CDD98234.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
phage-associated protein-like protein
L3_105_245G1_scaffold_335_30
Akkermansia sp. CAG:344, Akkermansia, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

37001..41287
DNA (4287bp) protein (1429aa)
Outer membrane autotransporter barrel domain protein n=1 Tax=Akkermansia sp. CAG:344 RepID=R7E2W1_9BACT
Outer membrane autotransporter barrel domain protein {ECO:0000313|EMBL:CDD95872.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;"
hypothetical protein
Displaying items 1-30 of 86 in total

View Taxonomy