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L3_105_245G1_scaffold_359

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_245G1_scaffold_359_1
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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395..1069
DNA (675bp) protein (225aa)
HAD hydrolase, family IA, variant 1 n=4 Tax=Bacteroidales RepID=D0TCT5_9BACE
HAD hydrolase, IA, variant 1 family protein {ECO:0000313|EMBL:KDS45334.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
HAD family phosphatase
L3_105_245G1_scaffold_359_2
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1075..1692)
DNA (618bp) protein (206aa)
RNA polymerase sigma-70 factor n=2 Tax=Parabacteroides RepID=C7X6H5_9PORP
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EFK64576.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
RNA polymerase ECF-type sigma factor
L3_105_245G1_scaffold_359_3
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2092..3666
DNA (1575bp) protein (525aa)
Uncharacterized protein n=7 Tax=Bacteroidales RepID=D0TCT7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKN19772.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_105_245G1_scaffold_359_4
Bacteroides sp. 2_1_33B, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3685..5067
DNA (1383bp) protein (461aa)
Tat pathway signal sequence domain protein n=6 Tax=Bacteroidales RepID=C7X6H3_9PORP
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EEY83113.1}; TaxID=469589 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_33B.;"
dehydrogenase exo-alpha-sialidase
L3_105_245G1_scaffold_359_5
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5080..6018
DNA (939bp) protein (313aa)
Tat pathway signal sequence domain protein n=3 Tax=Parabacteroides RepID=E1YQH4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN19770.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
L3_105_245G1_scaffold_359_6
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6023..6730
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Parabacteroides sp. D13 RepID=C7X6H1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ85441.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_105_245G1_scaffold_359_7
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6740..7321
DNA (582bp) protein (194aa)
Transcriptional regulator, LuxR family n=4 Tax=Bacteroidales RepID=C7X6H0_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN19768.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
transcriptional regulator
L3_105_245G1_scaffold_359_8
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7428..9752
DNA (2325bp) protein (775aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K5Z3U2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ85439.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
TonB-dependent outer membrane protein
L3_105_245G1_scaffold_359_9
unknown

Not on your lists

comp(9816..9947)
DNA (132bp) protein (44aa)

This feature has no annotations

L3_105_245G1_scaffold_359_10
Prevotella sp. P5-119, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10410..11336)
DNA (927bp) protein (309aa)
Branched-chain-amino-acid transaminase n=1 Tax=Bacteroides ovatus ATCC 8483 RepID=A7M0P8_BACOV
Contig53, whole genome shotgun sequence {ECO:0000313|EMBL:KIP62514.1}; TaxID=1602171 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella sp. P5-119.;"
branched-chain-amino-acid transaminase
L3_105_245G1_scaffold_359_11
Selenomonas ruminantium, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(11371..12045)
DNA (675bp) protein (225aa)
putative sugar transferase (EC:2.7.8.-)
Putative sugar transferase {ECO:0000313|EMBL:BAL83445.1}; EC=2.7.8.- {ECO:0000313|EMBL:BAL83445.1};; TaxID=927704 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 /; TAM6421).;"
Putative sugar transferase n=1 Tax=Selenomonas ruminantium subsp. lactilytica (strain NBRC 103574 / TAM6421) RepID=I0GRQ8_SELRL
L3_105_245G1_scaffold_359_12
Prevotella sp. P5-119, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12048..13259)
DNA (1212bp) protein (404aa)
Pyridoxal-dependent decarboxylase pyridoxal binding domain protein n=1 Tax=Prevotella sp. CAG:5226 RepID=R6A2M0_9BACT
Contig53, whole genome shotgun sequence {ECO:0000313|EMBL:KIP62512.1}; TaxID=1602171 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella sp. P5-119.;"
putative pyridoxal-dependent decarboxylase
L3_105_245G1_scaffold_359_13
Prevotella sp. CAG:5226, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13256..14149)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:5226 RepID=R6AYB6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDA46067.1}; TaxID=1262930 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:5226.;"
HpcH/HpaI aldolase
L3_105_245G1_scaffold_359_14
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14447..15538)
DNA (1092bp) protein (364aa)
glf; UDP-galactopyranose mutase Glf (EC:5.4.99.9)
UDP-galactopyranose mutase n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KL89_9FIRM
UDP-galactopyranose mutase {ECO:0000313|EMBL:EGN46969.1}; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3_1_57FAA_CT1.;"
L3_105_245G1_scaffold_359_15
Bdellovibrio sp. ArHS, Bdellovibrio, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15543..16781)
DNA (1239bp) protein (413aa)
Glycosyltransferase, group 1 family protein n=1 Tax=Staphylococcus aureus subsp. aureus 21235 RepID=F9KEQ3_STAAU
Uncharacterized protein {ECO:0000313|EMBL:KHD89998.1}; TaxID=1569284 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bdellovibrionaceae; Bdellovibrio.;" source="Bdellovibrio sp. ArHS.;"
group 1 glycosyl transferase
L3_105_245G1_scaffold_359_16
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16759..17853)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=N2B4X9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EOS18257.1}; TaxID=1235789 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii dnLKV18.;"
possible capsular polysaccharide related protein
L3_105_245G1_scaffold_359_17
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17881..18870)
DNA (990bp) protein (330aa)
Uncharacterized protein n=3 Tax=Bacteroides fragilis RepID=I8XMS1_BACFG
putative glycosyltransferase
Glycosyl transferase 8 family protein {ECO:0000313|EMBL:EXZ29948.1}; TaxID=1339327 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S36L11.;"
L3_105_245G1_scaffold_359_18
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18900..20015)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Bacteroides fragilis (strain YCH46) RepID=Q64XD0_BACFR
hypothetical protein
Glycosyl transferases group 1 family protein {ECO:0000313|EMBL:EYE47104.1}; TaxID=1339329 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. S23L17.;"
L3_105_245G1_scaffold_359_19
Bacteroides salyersiae, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20005..21189)
DNA (1185bp) protein (395aa)
Uncharacterized protein n=1 Tax=Bacteroides salyersiae CL02T12C01 RepID=I9SNT3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EIY57523.1}; TaxID=997887 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides salyersiae CL02T12C01.;"
L3_105_245G1_scaffold_359_20
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21457..22899)
DNA (1443bp) protein (481aa)
Polysaccharide biosynthesis protein n=1 Tax=Parabacteroides sp. 20_3 RepID=E1YNU9_9PORP
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EFK64867.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
polysaccharide biosynthesis protein
L3_105_245G1_scaffold_359_21
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22896..23606)
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Bacteroides barnesiae RepID=UPI00035CA906
Uncharacterized protein {ECO:0000313|EMBL:EQB88383.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
hypothetical protein
L3_105_245G1_scaffold_359_22
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23653..24810)
DNA (1158bp) protein (386aa)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:EXZ46182.1}; EC=5.1.3.14 {ECO:0000313|EMBL:EXZ46182.1};; TaxID=1339280 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. 2-F-2 #4.;"
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Bacteroides fragilis HMW 616 RepID=K1GHM6_BACFG
UDP-N-acetylglucosamine 2-epimerase
L3_105_245G1_scaffold_359_23
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24868..25140)
DNA (273bp) protein (91aa)
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
GDP-L-fucose synthase n=1 Tax=Bacteroides dorei 5_1_36/D4 RepID=C3RFS3_9BACE
GDP-L-fucose synthase
L3_105_245G1_scaffold_359_24

Not on your lists

comp(25137..26228)
DNA (1092bp) protein (364aa)
GDP-mannose 4,6-dehydratase {ECO:0000313|EMBL:EJX11023.1}; EC=4.2.1.47 {ECO:0000313|EMBL:EJX11023.1};; TaxID=749906 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="gut metagenome.;"
GDP-mannose 4,6-dehydratase n=1 Tax=gut metagenome RepID=J9H4L1_9ZZZZ
GDP-D-mannose dehydratase
L3_105_245G1_scaffold_359_25
Bacteroides sp. HPS0048, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26376..27443)
DNA (1068bp) protein (356aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. HPS0048 RepID=U6RTL0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOA59126.1}; TaxID=1078089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. HPS0048.;"
nucleotide sugar epimerase
L3_105_245G1_scaffold_359_26
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27447..28760)
DNA (1314bp) protein (438aa)
Nucleotide sugar dehydrogenase n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6AB65_9PORP
Nucleotide sugar dehydrogenase family protein {ECO:0000313|EMBL:KDS43901.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
UDP-glucose 6-dehydrogenase
L3_105_245G1_scaffold_359_27
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29053..30609)
DNA (1557bp) protein (519aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TCV1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KDS43907.1}; TaxID=1339341 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3776 Po2 i.;"
Protein of unknown function (DUF1703)./Predicted AAA-ATPase.
L3_105_245G1_scaffold_359_28
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30757..30957)
DNA (201bp) protein (67aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=D0TCV2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EKN19756.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
L3_105_245G1_scaffold_359_29
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31067..31609
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Parabacteroides distasonis CL03T12C09 RepID=K6AD33_9PORP
VirE N-terminal domain protein {ECO:0000313|EMBL:KDS75029.1}; TaxID=1339344 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis str. 3999B T(B) 4.;"
hypothetical protein
L3_105_245G1_scaffold_359_30
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31606..33396
DNA (1791bp) protein (597aa)
Uncharacterized protein n=2 Tax=Parabacteroides RepID=E1YQF8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN19754.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
hypothetical protein
Displaying items 1-30 of 38 in total

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