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L3_105_245G1_scaffold_444

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_245G1_scaffold_444_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..483)
DNA (483bp) protein (161aa)
Bacterial Ig-like domain family protein n=1 Tax=Clostridium difficile P28 RepID=T4NBP2_CLODI
Bacterial Ig-like domain family protein {ECO:0000313|EMBL:EQJ54753.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Ig domain-containing protein group 2 domain-containing protein
L3_105_245G1_scaffold_444_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(489..2453)
DNA (1965bp) protein (655aa)
Putative membrane protein n=1 Tax=Clostridium difficile P28 RepID=T4NHM0_CLODI
Putative membrane protein {ECO:0000313|EMBL:EQJ54752.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_105_245G1_scaffold_444_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2462..3385)
DNA (924bp) protein (308aa)
Glycosyl transferase 2 family protein n=1 Tax=Clostridium difficile P28 RepID=T4NGD6_CLODI
Glycosyl transferase 2 family protein {ECO:0000313|EMBL:EQJ54751.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
glycosyl transferase
L3_105_245G1_scaffold_444_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3458..3937)
DNA (480bp) protein (160aa)
Putative membrane protein n=1 Tax=Clostridium difficile P28 RepID=T4NH52_CLODI
Putative membrane protein {ECO:0000313|EMBL:EQJ54750.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_105_245G1_scaffold_444_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3879..5210)
DNA (1332bp) protein (444aa)
Putative membrane protein n=1 Tax=Clostridium difficile P28 RepID=T4NH52_CLODI
Putative membrane protein {ECO:0000313|EMBL:EQJ54750.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_105_245G1_scaffold_444_6
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5229..5570)
DNA (342bp) protein (114aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VRC1_9FIRM
Multidrug ABC transporter {ECO:0000313|EMBL:KGJ54888.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
hypothetical protein
L3_105_245G1_scaffold_444_7
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(5560..5916)
DNA (357bp) protein (119aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VRC0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGJ54887.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
EamA-like transporter family.
L3_105_245G1_scaffold_444_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5903..6805)
DNA (903bp) protein (301aa)
galE; nucleoside-diphosphate-sugar epimerase 1 ( UDP-glucose 4-epimerase) (EC:5.1.3.2)
Polysaccharide biosynthesis family protein n=1 Tax=Clostridium difficile P28 RepID=T4NHH7_CLODI
Polysaccharide biosynthesis family protein {ECO:0000313|EMBL:EQJ54749.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_105_245G1_scaffold_444_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6802..7917)
DNA (1116bp) protein (372aa)
carbamoylphosphate synthase small subunit (EC:6.3.5.5)
ATP-grasp domain protein n=1 Tax=Clostridium difficile P28 RepID=T4NBN8_CLODI
ATP-grasp domain protein {ECO:0000313|EMBL:EQJ54748.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_105_245G1_scaffold_444_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7937..9064)
DNA (1128bp) protein (376aa)
TDP-4-keto-6-deoxy-D-glucose transaminase family protein n=1 Tax=Clostridium difficile P28 RepID=T4NHL6_CLODI
TDP-4-keto-6-deoxy-D-glucose transaminase family protein {ECO:0000313|EMBL:EQJ54747.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
TDP-4-oxo-6-deoxy-D-glucose transaminase
L3_105_245G1_scaffold_444_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9051..10085)
DNA (1035bp) protein (345aa)
Oxidoreductase , NAD-binding Rossmann fold family protein n=1 Tax=Clostridium difficile P28 RepID=T4NGD1_CLODI
Oxidoreductase , NAD-binding Rossmann fold family protein {ECO:0000313|EMBL:EQJ54746.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_105_245G1_scaffold_444_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10087..11481)
DNA (1395bp) protein (465aa)
NDP-hexose 2,3-dehydratase family protein n=1 Tax=Clostridium difficile P28 RepID=T4NH49_CLODI
NDP-hexose 2,3-dehydratase family protein {ECO:0000313|EMBL:EQJ54745.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
NDP-hexose 2,3-dehydratase
L3_105_245G1_scaffold_444_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11486..12379)
DNA (894bp) protein (298aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Clostridium difficile P28 RepID=T4NHG9_CLODI
L3_105_245G1_scaffold_444_14
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12381..13409)
DNA (1029bp) protein (343aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase n=3 Tax=Firmicutes RepID=G1VRB1_9FIRM
L3_105_245G1_scaffold_444_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13420..15132)
DNA (1713bp) protein (571aa)
Putative membrane protein n=1 Tax=Clostridium difficile P28 RepID=T4NHL0_CLODI
Putative membrane protein {ECO:0000313|EMBL:EQJ54742.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_105_245G1_scaffold_444_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15138..16595)
DNA (1458bp) protein (486aa)
Polysaccharide biosynthesis family protein n=1 Tax=Clostridium difficile P28 RepID=T4NGC8_CLODI
Polysaccharide biosynthesis family protein {ECO:0000313|EMBL:EQJ54741.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Membrane protein involved in the export of O-antigen and teichoic acid
L3_105_245G1_scaffold_444_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16588..17688)
DNA (1101bp) protein (367aa)
UDP-galactopyranose mutase {ECO:0000313|EMBL:EQJ54740.1}; EC=5.4.99.9 {ECO:0000313|EMBL:EQJ54740.1};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
glf; hypothetical protein (EC:5.4.99.9)
UDP-galactopyranose mutase n=1 Tax=Clostridium difficile P28 RepID=T4NH44_CLODI
L3_105_245G1_scaffold_444_18
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17698..18651)
DNA (954bp) protein (318aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=H1AX23_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC84795.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
dTDP-rhamnosyl transferase rfbF
L3_105_245G1_scaffold_444_19
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(18644..19582)
DNA (939bp) protein (313aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 2_2_44A RepID=G1VRA6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX74420.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
glycosyl transferase 2 family protein
L3_105_245G1_scaffold_444_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19539..20687)
DNA (1149bp) protein (383aa)
Glycosyltransferase, group 1 family protein n=4 Tax=Firmicutes RepID=E4LYM4_9CLOT
Glycosyl transferases group 1 family protein {ECO:0000313|EMBL:EQJ54737.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_105_245G1_scaffold_444_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20700..21821)
DNA (1122bp) protein (374aa)
Putative membrane protein n=1 Tax=Clostridium difficile P28 RepID=T4NGC4_CLODI
Putative membrane protein {ECO:0000313|EMBL:EQJ54736.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_105_245G1_scaffold_444_22
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21814..22641)
DNA (828bp) protein (276aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EFR36101.1}; EC=2.4.-.- {ECO:0000313|EMBL:EFR36101.1};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Glycosyltransferase, group 2 family protein n=6 Tax=Firmicutes RepID=E4LYM6_9CLOT
putative glycosyl transferase family 2 protein
L3_105_245G1_scaffold_444_23
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22625..23776)
DNA (1152bp) protein (384aa)
glycosyltransferase, group 1 family protein (EC:2.4.-.-)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VRA1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY88022.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L3_105_245G1_scaffold_444_24
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(23790..24416)
DNA (627bp) protein (209aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=G1VRA0_9FIRM
Sialic acid O-acetyltransferase NeuD family sugar O-acyltransferase {ECO:0000313|EMBL:ENY88023.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family protein
L3_105_245G1_scaffold_444_25
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(24432..25031)
DNA (600bp) protein (200aa)
Bacterial sugar transferase n=5 Tax=Firmicutes RepID=E4LYM9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC84813.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
UDP-galactose phosphate transferase
L3_105_245G1_scaffold_444_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25031..26215)
DNA (1185bp) protein (395aa)
DegT/DnrJ/EryC1/StrS aminotransferase family protein n=4 Tax=Firmicutes RepID=E4LYN0_9CLOT
Aminotransferase class-V family protein {ECO:0000313|EMBL:EQJ54730.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
aminotransferase
L3_105_245G1_scaffold_444_27
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26291..26836)
DNA (546bp) protein (182aa)
Transcription termination/antitermination factor NusG n=5 Tax=Firmicutes RepID=E4LYN1_9CLOT
Transcription termination/antitermination factor NusG {ECO:0000313|EMBL:EFR36114.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Transcription antiterminator
L3_105_245G1_scaffold_444_28
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27151..29046)
DNA (1896bp) protein (632aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1AX33_9FIRM
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:EFR36108.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
3-beta hydroxysteroid dehydrogenase/isomerase family protein
L3_105_245G1_scaffold_444_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29614..29853)
DNA (240bp) protein (80aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=E4LYN3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ54727.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_105_245G1_scaffold_444_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29850..30347)
DNA (498bp) protein (166aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=T4NGB4_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ54726.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
transposase IS4
Displaying items 1-30 of 31 in total

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