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L3_105_245G1_scaffold_474

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_245G1_scaffold_474_1
unknown

Not on your lists

comp(13..210)
DNA (198bp) protein (66aa)

This feature has no annotations

L3_105_245G1_scaffold_474_2
Lachnospiraceae bacterium 5_1_63FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(321..950)
DNA (630bp) protein (210aa)
ABC-2 transporter family protein n=3 Tax=Clostridiales RepID=T4LZW9_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EFV17428.1}; TaxID=658089 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 5_1_63FAA.;"
hypothetical protein
L3_105_245G1_scaffold_474_3
Dorea sp. 5-2, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(965..1789)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Dorea sp. 5-2 RepID=R9NDP9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS81086.1}; TaxID=1235798 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea.;" source="Dorea sp. 5-2.;"
ABC-type multidrug transport system, ATPase component
L3_105_245G1_scaffold_474_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1821..2213)
DNA (393bp) protein (131aa)
GntR family transcriptional regulator n=1 Tax=Clostridium difficile E10 RepID=U3VGV0_CLODI
GntR family transcriptional regulator {ECO:0000313|EMBL:CCL00204.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
GntR family transcriptional regulator
L3_105_245G1_scaffold_474_5
unknown

Not on your lists

2597..2782
DNA (186bp) protein (62aa)

This feature has no annotations

L3_105_245G1_scaffold_474_6
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2760..2921
DNA (162bp) protein (54aa)
Putative uncharacterized protein n=3 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JS78_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN36008.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
hypothetical protein
L3_105_245G1_scaffold_474_7
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2978..3841
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2YBI3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD59610.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
putative transposase OrfB
L3_105_245G1_scaffold_474_8
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4108..4446
DNA (339bp) protein (113aa)
Uncharacterized protein n=11 Tax=Clostridium clostridioforme PF9_9CLOT">RepID=N9WPF9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ67469.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
transposase IS4 family protein
L3_105_245G1_scaffold_474_9
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5315..6829)
DNA (1515bp) protein (505aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PGW6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22850.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_105_245G1_scaffold_474_10
Eubacterium sp. 14-2, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7703..8101
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. 14-2 RepID=S0J023_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOT25562.1}; TaxID=1235790 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium sp. 14-2.;"
transposase IS4 family protein
L3_105_245G1_scaffold_474_11
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8199..9116)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTM4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80613.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_105_245G1_scaffold_474_12
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9479..11041
DNA (1563bp) protein (521aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTM2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80612.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_105_245G1_scaffold_474_13
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11038..13437
DNA (2400bp) protein (800aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTM1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80610.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
TraG/TraD
L3_105_245G1_scaffold_474_14
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13434..14387
DNA (954bp) protein (318aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTM0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80609.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_105_245G1_scaffold_474_15
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14526..15881
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTL9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80608.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
DNA primase
L3_105_245G1_scaffold_474_16
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15933..16964)
DNA (1032bp) protein (344aa)
ParB-like protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTL8_9CLOT
ParB-like protein {ECO:0000313|EMBL:EEA80607.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_105_245G1_scaffold_474_17
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16979..17896)
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTL7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80606.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_105_245G1_scaffold_474_18
unknown

Not on your lists

comp(18135..18230)
DNA (96bp) protein (32aa)

This feature has no annotations

L3_105_245G1_scaffold_474_19
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18324..20021
DNA (1698bp) protein (566aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTL5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80604.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_105_245G1_scaffold_474_20
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20026..21027
DNA (1002bp) protein (334aa)
Nucleic acid-binding domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTL4_9CLOT
Nucleic acid-binding domain protein {ECO:0000313|EMBL:EEA80603.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_105_245G1_scaffold_474_21
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20996..21919
DNA (924bp) protein (308aa)
DNA polymerase III subunit delta' (EC:2.7.7.7)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTL3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80602.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_105_245G1_scaffold_474_22
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21937..23370
DNA (1434bp) protein (478aa)
DNA polymerase III, subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III subunit gamma and tau domain protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTL1_9CLOT
DNA polymerase III subunit gamma and tau domain protein {ECO:0000313|EMBL:EEA80600.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_105_245G1_scaffold_474_23
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23393..23617
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTL0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80599.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_105_245G1_scaffold_474_24
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24148..25386)
DNA (1239bp) protein (413aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTK6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80636.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
L3_105_245G1_scaffold_474_25
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26511..28088)
DNA (1578bp) protein (526aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTK5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80635.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
L3_105_245G1_scaffold_474_26
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28312..28527
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Clostridium nexile DSM 1787 RepID=B6FTK4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEA80634.1}; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
hypothetical protein
Displaying 26 items

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