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L3_105_245G1_scaffold_513

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_245G1_scaffold_513_1
Oscillibacter valericigenes, Oscillibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(466..1215)
DNA (750bp) protein (250aa)
hypothetical protein n=1 Tax=Dehalobacter sp. E1 RepID=UPI0002E380D7
putative transposase
Putative transposase {ECO:0000313|EMBL:BAK97628.1}; TaxID=693746 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Oscillospiraceae; Oscillibacter.;" source="Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 /; Sjm18-20).;"
L3_105_245G1_scaffold_513_2
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1336..1827)
DNA (492bp) protein (164aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CI20_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO29722.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
transposase IS66
L3_105_245G1_scaffold_513_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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2274..2891
DNA (618bp) protein (206aa)
Citrate transporter n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQK0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56980.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
sodium/sulfate symporter
L3_105_245G1_scaffold_513_4
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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2965..3744
DNA (780bp) protein (260aa)
Citrate transporter n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQK0_9FIRM
Citrate transporter {ECO:0000313|EMBL:EHM51087.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
sodium/sulfate symporter
L3_105_245G1_scaffold_513_5
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3792..5252)
DNA (1461bp) protein (487aa)
PAS domain S-box protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQK7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56976.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Fis family PAS modulated sigma-54 specific transcriptional regulator
L3_105_245G1_scaffold_513_6
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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5456..7171
DNA (1716bp) protein (572aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040};; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="Sporomusa ovata DSM 2662.;"
Dihydroxy-acid dehydratase n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0JVR9_9FIRM
dihydroxy-acid dehydratase
L3_105_245G1_scaffold_513_7
unknown

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7155..7652
DNA (498bp) protein (166aa)

This feature has no annotations

L3_105_245G1_scaffold_513_8
Thermobacillus composti, Thermobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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7649..8518
DNA (870bp) protein (290aa)
Beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase n=1 Tax=Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) RepID=L0EGI2_THECK
beta-hydroxyacid dehydrogenase
Beta-hydroxyacid dehydrogenase, 3-hydroxyisobutyrate dehydrogenase {ECO:0000313|EMBL:AGA59358.1}; TaxID=717605 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Thermobacillus.;" source="Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4).;"
L3_105_245G1_scaffold_513_9
unknown

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comp(9263..9772)
DNA (510bp) protein (170aa)

This feature has no annotations

L3_105_245G1_scaffold_513_10
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10366..12798
DNA (2433bp) protein (811aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C7Y8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35282.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
O-antigen ligase
L3_105_245G1_scaffold_513_11
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13016..14167)
DNA (1152bp) protein (384aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C7Y6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35280.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_105_245G1_scaffold_513_12
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14304..14726
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2DEW1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI78081.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_105_245G1_scaffold_513_13
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14798..19210)
DNA (4413bp) protein (1471aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=H1CDY4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF54893.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
S-layer domain-containing protein
L3_105_245G1_scaffold_513_14
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19408..20553
DNA (1146bp) protein (382aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C9U8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF53764.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
integrase family protein
L3_105_245G1_scaffold_513_15
Peptococcaceae bacterium BRH_c4a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20998..22245
DNA (1248bp) protein (416aa)
Transposase n=1 Tax=Desulfitobacterium dichloroeliminans (strain LMG P-21439 / DCA1) RepID=L0F9S6_DESDL
Transposase {ECO:0000313|EMBL:KJR99911.1}; TaxID=1629716 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium BRH_c4a.;"
transposase
L3_105_245G1_scaffold_513_16
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23519..23662
DNA (144bp) protein (48aa)
Uncharacterized protein (Fragment) n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2C8R3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI65642.1}; Flags: Fragment;; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_105_245G1_scaffold_513_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23736..25337
DNA (1602bp) protein (534aa)
yokA; resolvase YokA (EC:3.1.-.-)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C7Y2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35276.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_105_245G1_scaffold_513_18
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25337..26089
DNA (753bp) protein (251aa)
Recombinase (Fragment) n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YVM0_9FIRM
Recombinase {ECO:0000313|EMBL:EHM40186.1}; Flags: Fragment;; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
recombinase
L3_105_245G1_scaffold_513_19
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26086..27165
DNA (1080bp) protein (360aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=H1CI06_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO30210.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
resolvase, n-terminal:recombinase
Displaying 19 items

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