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L3_105_245G1_scaffold_542

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_245G1_scaffold_542_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..644)
DNA (642bp) protein (214aa)
PTS system, mannose/fructose/sorbose , IID component family protein n=1 Tax=Escherichia coli 08BKT77219 RepID=U1AY05_ECOLX
manZ; PTS system mannose-specific transporter subunit IID
Mannose permease IID component {ECO:0000313|EMBL:ESA85685.1}; TaxID=1269007 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 909945-2.;"
L3_105_245G1_scaffold_542_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(657..1457)
DNA (801bp) protein (267aa)
Mannose permease IIC component n=1377 Tax=Enterobacteriaceae RepID=PTNC_ECO57
PTS system mannose/fructose/sorbose family transporter subunit IIC
Mannose permease IIC component {ECO:0000313|EMBL:EOV76374.1}; TaxID=1182677 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE70.;"
L3_105_245G1_scaffold_542_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1520..2491)
DNA (972bp) protein (324aa)
PTS system mannose-specific EIIAB component n=1036 Tax=Enterobacteriaceae RepID=PTNAB_ECO57
manX; putative PTS system, mannose-specific component
PTS system mannose-specific EIIAB component {ECO:0000313|EMBL:ESA66463.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
L3_105_245G1_scaffold_542_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2757..2966
DNA (210bp) protein (70aa)
Uncharacterized protein n=7 Tax=Enterobacteriaceae RepID=C8UA74_ECO10
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGJ04730.1}; TaxID=556266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli D9.;"
L3_105_245G1_scaffold_542_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2954..4510
DNA (1557bp) protein (519aa)
UPF0053 inner membrane protein YoaE n=1151 Tax=Enterobacteriaceae RepID=YOAE_ECO57
integral membrane protein TerC
Putative transporter {ECO:0000313|EMBL:EHU46368.1}; TaxID=868141 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC2D.;"
L3_105_245G1_scaffold_542_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4514..5314)
DNA (801bp) protein (267aa)
Phosphodiesterase n=2 Tax=Escherichia coli RepID=L3Y909_ECOLX
Rtn protein
Putative cyclic-di-GMP phosphodiesterase AdrB {ECO:0000313|EMBL:END92119.1}; TaxID=1125642 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli P0301867.13.;"
L3_105_245G1_scaffold_542_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5333..6112)
DNA (780bp) protein (260aa)
Putative cyclic-di-GMP phosphodiesterase AdrB n=1 Tax=Escherichia coli P0304816.6 RepID=N4BSL1_ECOLX
hypothetical protein
Phosphodiesterase {ECO:0000313|EMBL:EHX28244.1}; TaxID=868192 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC12B.;"
L3_105_245G1_scaffold_542_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6243..7607)
DNA (1365bp) protein (455aa)
L-serine dehydratase 1 (EC:4.3.1.17)
L-serine dehydratase 1 n=316 Tax=Enterobacteriaceae RepID=SDHL_ECOLI
Serine dehydratase {ECO:0000313|EMBL:KDV34965.1}; TaxID=1446583 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O145:H25 str. 07-3858.;"
L3_105_245G1_scaffold_542_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7791..8369)
DNA (579bp) protein (193aa)
Uncharacterized Nudix hydrolase NudL {ECO:0000256|HAMAP-Rule:MF_01592, ECO:0000256|SAAS:SAAS00010716}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01592, ECO:0000256|SAAS:SAAS00280366};; TaxID=749549 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 198-1.;"
Uncharacterized Nudix hydrolase NudL n=904 Tax=Enterobacteriaceae RepID=NUDL_ECO27
NUDIX hydrolase
L3_105_245G1_scaffold_542_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8373..9734)
DNA (1362bp) protein (454aa)
pabB; aminodeoxychorismate synthase subunit I (EC:2.6.1.85)
Aminodeoxychorismate synthase {ECO:0000313|EMBL:EZE24862.1}; EC=2.6.1.85 {ECO:0000313|EMBL:EZE24862.1};; TaxID=1446580 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O123:H11 str. 2009C-3307.;"
p-aminobenzoate synthetase, component I n=335 Tax=Escherichia coli RepID=J7QEZ9_ECOLX
L3_105_245G1_scaffold_542_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9808..9987
DNA (180bp) protein (60aa)
UPF0181 protein YoaH n=1394 Tax=Enterobacteriaceae RepID=YOAH_ECO24
hypothetical protein
UPF0181 protein YoaH {ECO:0000256|HAMAP-Rule:MF_00507}; TaxID=1444123 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C1.;"
L3_105_245G1_scaffold_542_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10107..10406)
DNA (300bp) protein (100aa)
Uncharacterized protein YoaC n=597 Tax=Enterobacteriaceae RepID=YOAC_ECO57
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EGI45467.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
L3_105_245G1_scaffold_542_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10829..11176)
DNA (348bp) protein (116aa)
Uncharacterized protein n=23 Tax=Enterobacteriaceae RepID=C3T6H2_ECOLX
yoaB; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCK47039.1}; TaxID=475609 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli chi7122.;"
L3_105_245G1_scaffold_542_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11305..13215
DNA (1911bp) protein (637aa)
ATP-dependent helicase yoaA n=846 Tax=Enterobacteriaceae RepID=C3T6H7_ECOLX
yoaA; ATP-dependent helicase
ATP-dependent helicase {ECO:0000313|EMBL:EGU99525.1}; TaxID=796392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 79-10.;"
L3_105_245G1_scaffold_542_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13237..13968
DNA (732bp) protein (244aa)
Universal bacterial protein YeaZ n=17 Tax=Escherichia coli RepID=D7YK98_ECOLX
Universal bacterial protein YeaZ {ECO:0000313|EMBL:EFK73633.1}; TaxID=749532 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 78-1.;"
yeaZ; hypothetical protein
L3_105_245G1_scaffold_542_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14008..14589
DNA (582bp) protein (194aa)
Outer membrane lipoprotein n=97 Tax=Escherichia coli RepID=J9ZJE6_ECO14
outer membrane lipoprotein
Outer membrane lipoprotein, Slp family {ECO:0000313|EMBL:EFK73632.1}; TaxID=749532 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 78-1.;"
L3_105_245G1_scaffold_542_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14728..16479
DNA (1752bp) protein (584aa)
Long-chain-fatty-acid-CoA ligase n=1 Tax=Escherichia coli HVH 221 (4-3136817) RepID=T8CQT3_ECOLX
Long-chain-fatty-acid-CoA ligase {ECO:0000313|EMBL:ESK36061.1}; TaxID=1281241 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3323-1.;"
AMP-dependent synthetase and ligase
L3_105_245G1_scaffold_542_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16561..17676
DNA (1116bp) protein (372aa)
rnd; ribonuclease D (EC:3.1.26.3)
Ribonuclease D {ECO:0000256|HAMAP-Rule:MF_01899}; Short=RNase D {ECO:0000256|HAMAP-Rule:MF_01899};; EC=3.1.13.5 {ECO:0000256|HAMAP-Rule:MF_01899};; TaxID=869687 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 4.0967.;"
Ribonuclease D n=566 Tax=Enterobacteriaceae RepID=C3T6J7_ECOLX
L3_105_245G1_scaffold_542_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17730..18695)
DNA (966bp) protein (322aa)
Ferredoxin n=55 Tax=Escherichia coli RepID=B1IPC9_ECOLC
dioxygenase, subunit beta YeaX
2Fe-2S iron-sulfur cluster binding domain protein {ECO:0000313|EMBL:EFK45364.1}; TaxID=679206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 119-7.;"
L3_105_245G1_scaffold_542_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18751..19875)
DNA (1125bp) protein (375aa)
Putative dioxygenase subunit alpha YeaW n=664 Tax=Enterobacteriaceae RepID=YEAW_ECO57
Rieske (2Fe-2S) iron-sulfur domain-containing protein
Rieske [2Fe-2S] domain protein {ECO:0000313|EMBL:ESA66477.1}; TaxID=1268978 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 113303.;"
L3_105_245G1_scaffold_542_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19907..21517)
DNA (1611bp) protein (537aa)
Transporter, betaine/carnitine/choline transporter (BCCT) family n=535 Tax=Enterobacteriaceae RepID=B7A1T2_ECO57
BCCT-family transporter
Transporter, betaine/carnitine/choline family {ECO:0000313|EMBL:ESD73502.1}; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908555.;"
L3_105_245G1_scaffold_542_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21768..22853)
DNA (1086bp) protein (362aa)
Tartrate dehydrogenase {ECO:0000313|EMBL:EMW20418.1}; EC=1.1.1.93 {ECO:0000313|EMBL:EMW20418.1};; TaxID=1116125 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2845650.;"
D-malate dehydrogenase [decarboxylating] n=402 Tax=Enterobacteriaceae RepID=DMLA_ECOLI
tartrate dehydrogenase/decarboxylase (D-malate dehydrogenase [decarboxylating])
L3_105_245G1_scaffold_542_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22956..23879
DNA (924bp) protein (308aa)
LysR family transcriptional regulator n=643 Tax=Enterobacteriaceae RepID=H9Y2E1_ECOLW
yeaT; putative DNA-binding transcriptional regulator
LysR substrate binding domain protein {ECO:0000313|EMBL:ESA79662.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L3_105_245G1_scaffold_542_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24006..24644
DNA (639bp) protein (213aa)
Leucine efflux protein n=442 Tax=Enterobacteriaceae RepID=LEUE_ECO24
leucine export protein LeuE
Leucine efflux protein {ECO:0000313|EMBL:EFK52069.1}; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 107-1.;"
L3_105_245G1_scaffold_542_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24817..25176
DNA (360bp) protein (120aa)
Uncharacterized protein YeaR n=998 Tax=Enterobacteriaceae RepID=YEAR_ECO57
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZE24847.1}; TaxID=1446580 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O123:H11 str. 2009C-3307.;"
L3_105_245G1_scaffold_542_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25180..25368
DNA (189bp) protein (63aa)
Uncharacterized protein n=269 Tax=Enterobacteriaceae RepID=B6IBM2_ECOSE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHJ17698.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
Displaying 26 items

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