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L3_105_245G1_scaffold_552

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_245G1_scaffold_552_1
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..89
DNA (87bp) protein (29aa)
Ribosome-associated factor Y n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MQ53_CLOSA
ribosome-associated factor Y
Ribosome-associated factor Y {ECO:0000313|EMBL:AGX41552.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_105_245G1_scaffold_552_2
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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434..3088
DNA (2655bp) protein (885aa)
Protein translocase subunit SecA n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U6W5_9CLOT
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
secA; protein translocase subunit SecA
L3_105_245G1_scaffold_552_3
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3444..4421
DNA (978bp) protein (326aa)
Peptide chain release factor 2 n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6SXG7_9CLOT
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
prfB; peptide chain release factor 2
L3_105_245G1_scaffold_552_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4777..5214
DNA (438bp) protein (146aa)
Heat shock protein, molecular chaperone n=4 Tax=Clostridium butyricum RepID=B1QS45_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ34185.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
heat shock protein Hsp20
L3_105_245G1_scaffold_552_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5269..5712
DNA (444bp) protein (148aa)
Heat shock protein, molecular chaperone n=4 Tax=Clostridium butyricum RepID=B1QS45_CLOBU
Heat shock protein, molecular chaperone {ECO:0000313|EMBL:KJZ86400.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hsp; 18 kDa heat shock protein Hsp
L3_105_245G1_scaffold_552_6
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5986..7392)
DNA (1407bp) protein (469aa)
Aminopeptidase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MLT6_CLOSA
aminopeptidase
Aminopeptidase {ECO:0000313|EMBL:AGX41555.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_105_245G1_scaffold_552_7
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7428..7760)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TVI4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ50917.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L3_105_245G1_scaffold_552_8
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7881..8624
DNA (744bp) protein (248aa)
Response regulator GtcR n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MM11_CLOSA
gtcR1; response regulator GtcR
Response regulator GtcR {ECO:0000313|EMBL:AGX41558.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_105_245G1_scaffold_552_9
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8611..10095
DNA (1485bp) protein (495aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Clostridium sp. DL-VIII RepID=G7MBF1_9CLOT
integral membrane sensor signal transduction histidine kinase
L3_105_245G1_scaffold_552_10
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10196..11035
DNA (840bp) protein (280aa)
CAAX amino terminal protease family n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U6W3_9CLOT
CAAX amino terminal protease family {ECO:0000313|EMBL:EKQ50914.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
CAAX amino terminal protease family
L3_105_245G1_scaffold_552_11
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11435..13600
DNA (2166bp) protein (722aa)
Tex-like protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7MBF3_9CLOT
Tex-like protein {ECO:0000313|EMBL:EHI97480.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
Tex-like protein
L3_105_245G1_scaffold_552_12
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13951..14250
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LNN6_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF54445.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_105_245G1_scaffold_552_13
Ruminococcus lactaris, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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14621..16576
DNA (1956bp) protein (652aa)
1,4-alpha-glucan branching enzyme GlgB {ECO:0000256|HAMAP-Rule:MF_00685}; EC=2.4.1.18 {ECO:0000256|HAMAP-Rule:MF_00685};; 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase {ECO:0000256|HAMAP-Rule:MF_00685}; Alpha-(1->4)-glucan branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; Glycogen branching enzyme {ECO:0000256|HAMAP-Rule:MF_00685}; TaxID=1073376 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus lactaris CC59_002D.;"
alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase (EC:2.4.1.18)
1,4-alpha-glucan branching enzyme GlgB n=2 Tax=Ruminococcus lactaris RepID=B5CPR3_9FIRM
L3_105_245G1_scaffold_552_14
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16641..16811)
DNA (171bp) protein (57aa)
CBS domain containing protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MW61_9CLOT
CBS domain containing protein
CBS domain containing protein {ECO:0000313|EMBL:AGF58841.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_105_245G1_scaffold_552_15
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17099..18025
DNA (927bp) protein (309aa)
DMT superfamily permease n=1 Tax=Clostridium saccharobutylicum DSM 13864 PF9_CLOSA">RepID=U5MPF9_CLOSA
DMT superfamily permease
DMT superfamily permease {ECO:0000313|EMBL:AGX41566.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_105_245G1_scaffold_552_16
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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18129..19157
DNA (1029bp) protein (343aa)
UPF0053 protein YrkA n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MN90_CLOSA
putative transporter
Putative transporter {ECO:0000313|EMBL:CDM68991.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L3_105_245G1_scaffold_552_17
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19529..20074
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EKK3_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM67428.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
L3_105_245G1_scaffold_552_18
Selenomonas sp. F0473, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

20359..21459
DNA (1101bp) protein (367aa)
ABC transporter substrate-binding protein n=1 Tax=Zymophilus raffinosivorans RepID=UPI000372818B
Uncharacterized protein {ECO:0000313|EMBL:EKU72029.1}; TaxID=999423 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas sp. F0473.;"
sugar ABC transporter substrate-binding protein
L3_105_245G1_scaffold_552_19
Selenomonas artemidis, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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21736..23310
DNA (1575bp) protein (525aa)
hypothetical protein n=1 Tax=Zymophilus raffinosivorans RepID=UPI0003807AB3
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFW29669.1}; TaxID=749551 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas artemidis F0399.;"
ABC transporter related protein
L3_105_245G1_scaffold_552_20
Anoxybacillus ayderensis, Anoxybacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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23310..24497
DNA (1188bp) protein (396aa)
L-arabinose ABC transporter (Permease) n=1 Tax=Geobacillus kaustophilus (strain HTA426) RepID=Q5KYP3_GEOKA
Strain AB04 contig000004, whole genome shotgun sequence {ECO:0000313|EMBL:KIP21640.1}; TaxID=265546 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Anoxybacillus.;" source="Anoxybacillus ayderensis.;"
araH; L-arabinose ABC transporter permease
L3_105_245G1_scaffold_552_21
unknown

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24668..24868
DNA (201bp) protein (67aa)

This feature has no annotations

Displaying 21 items

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