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L3_105_245G1_scaffold_564

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_245G1_scaffold_564_1
Blautia hansenii, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..799
DNA (798bp) protein (266aa)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EEX22412.1}; EC=3.5.1.28 {ECO:0000313|EMBL:EEX22412.1};; TaxID=537007 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Blautia hansenii DSM 20583.;"
N-acetylmuramoyl-L-alanine amidase n=1 Tax=Blautia hansenii DSM 20583 RepID=C9L5I0_BLAHA
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase./Putative cell wall binding repeat.
L3_105_245G1_scaffold_564_2
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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990..2924
DNA (1935bp) protein (645aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6PFA0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22260.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
polysaccharide biosynthesis protein CapD
L3_105_245G1_scaffold_564_3
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2963..4366
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2YIR4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD57377.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
O-antigen polymerase
L3_105_245G1_scaffold_564_4
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4367..5572
DNA (1206bp) protein (402aa)
DegT/DnrJ/EryC1/StrS aminotransferase family protein n=2 Tax=Clostridium RepID=B6FJA3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22259.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis
L3_105_245G1_scaffold_564_5
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5587..6267
DNA (681bp) protein (227aa)
Bacterial sugar transferase n=2 Tax=Clostridium RepID=B6FJA2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22258.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
Sugar transferases involved in lipopolysaccharide synthesis
L3_105_245G1_scaffold_564_6
Lachnospiraceae bacterium CAG:364, Clostridiales, Clostridia, Firmicutes, Bacteria

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6279..7274
DNA (996bp) protein (332aa)
Glycosyl transferase n=1 Tax=Lachnospiraceae bacterium CAG:364 RepID=R6NXX4_9FIRM
Glycosyl transferase {ECO:0000313|EMBL:CDC11121.1}; TaxID=1262983 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; environmental samples.;" source="Lachnospiraceae bacterium CAG:364.;"
Glycosyltransferases, probably involved in cell wall biogenesis
L3_105_245G1_scaffold_564_7
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7285..8157
DNA (873bp) protein (291aa)
LICD family protein n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2BVP4_CLOSY
LICD family protein {ECO:0000313|EMBL:ERI75893.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
L3_105_245G1_scaffold_564_8
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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8154..8870
DNA (717bp) protein (239aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000256|HAMAP-Rule:MF_00108}; MEP cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Dorea sp. CAG:317 RepID=R6XM59_9FIRM
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
L3_105_245G1_scaffold_564_9
Dorea sp. CAG:317, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

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8863..9876
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Dorea sp. CAG:317 RepID=R6W8J3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD07413.1}; TaxID=1262873 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea sp. CAG:317.;"
alcohol dehydrogenase
L3_105_245G1_scaffold_564_10
Gemella haemolysans, Gemella, Bacillales, Bacilli, Firmicutes, Bacteria

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9878..10849
DNA (972bp) protein (324aa)
putative glycosyl transferase (EC:2.4.1.-)
Putative uncharacterized protein n=1 Tax=Gemella haemolysans M341 RepID=F3A4D6_9BACL
Uncharacterized protein {ECO:0000313|EMBL:EGF86699.1}; TaxID=562981 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillales Family XI. Incertae Sedis; Gemella.;" source="Gemella haemolysans M341.;"
L3_105_245G1_scaffold_564_11
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10860..11948
DNA (1089bp) protein (363aa)
Glycosyltransferase, group 1 family protein {ECO:0000313|EMBL:EEG73582.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEG73582.1};; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
Glycosyltransferase, group 1 family protein n=1 Tax=Clostridium hylemonae DSM 15053 RepID=C0C2F8_9CLOT
wefM; glycosyl transferase
L3_105_245G1_scaffold_564_12
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

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11975..13075
DNA (1101bp) protein (367aa)
DegT/DnrJ/EryC1/StrS aminotransferase family protein n=1 Tax=Subdoligranulum variabile DSM 15176 RepID=D1PK38_9FIRM
DegT/DnrJ/EryC1/StrS aminotransferase family protein {ECO:0000313|EMBL:EFB77136.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
DegT/DnrJ/EryC1/StrS aminotransferase
L3_105_245G1_scaffold_564_13
BJP_08E140C01_Spirochaeta_53_29, Spirochaeta, Spirochaetales, Spirochaetia, Spirochatetes, Bacteria

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13082..13954
DNA (873bp) protein (291aa)
Glucose-1-phosphate thymidylyltransferase id=4390415 bin=GWF2_Clostridiales_38_85 species=Exiguobacterium sp. genus=Exiguobacterium taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_Clostridiales_38_85 organism_group=Firmicute organism_desc=a212
glucose-1-phosphate thymidylyltransferase
Tax=BJP_08E140C01_Spirochaeta_53_29
L3_105_245G1_scaffold_564_14
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

13956..14978
DNA (1023bp) protein (341aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] spiroforme DSM 1552.;"
dTDP-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase n=1 Tax=Clostridium spiroforme DSM 1552 RepID=B1C4I2_9FIRM
L3_105_245G1_scaffold_564_15
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14991..15647
DNA (657bp) protein (219aa)
N-acetylneuraminate synthase n=1 Tax=Desulfitobacterium metallireducens DSM 15288 RepID=G6GG96_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHE97671.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family
L3_105_245G1_scaffold_564_16
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15671..16618
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HEX3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH96854.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
glycosyl transferase family protein
L3_105_245G1_scaffold_564_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16642..18081
DNA (1440bp) protein (480aa)
UPI0003D6990C related cluster n=1 Tax=unknown RepID=UPI0003D6990C
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:ETI91187.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
polysaccharide biosynthesis protein
L3_105_245G1_scaffold_564_18
Tyzzerella nexilis, Tyzzerella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18140..19054
DNA (915bp) protein (305aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EEA83917.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEA83917.1};; TaxID=500632 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Tyzzerella.;" source="Tyzzerella nexilis DSM 1787.;"
Glycosyltransferase, group 2 family protein n=2 Tax=Clostridium RepID=B6FJ75_9CLOT
Glycosyltransferases involved in cell wall biogenesis
L3_105_245G1_scaffold_564_19
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19073..19471
DNA (399bp) protein (133aa)
GtrA-like protein n=2 Tax=Clostridium RepID=B6FJ74_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22501.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
GtrA family protein
L3_105_245G1_scaffold_564_20
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

19473..21305
DNA (1833bp) protein (611aa)
Uncharacterized protein n=1 Tax=Cryptobacterium sp. CAG:338 RepID=R7CHD0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI73888.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
hypothetical protein
L3_105_245G1_scaffold_564_21
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21524..22585
DNA (1062bp) protein (354aa)
Cell envelope-like function transcriptional attenuator common domain protein n=2 Tax=Clostridium RepID=B6FJ71_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22498.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
L3_105_245G1_scaffold_564_22
Clostridium nexile CAG:348, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22691..24208
DNA (1518bp) protein (506aa)
Uncharacterized protein n=1 Tax=Clostridium nexile CAG:348 RepID=R6QKM6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC22497.1}; TaxID=1263069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium nexile CAG:348.;"
hypothetical protein
Displaying 22 items

View Taxonomy