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L3_105_245G1_scaffold_570

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_245G1_scaffold_570_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..824)
DNA (822bp) protein (274aa)
apaH; diadenosine tetraphosphatase (EC:3.6.1.41)
Bis(5'-nucleosyl)-tetraphosphatase, symmetrical {ECO:0000256|HAMAP-Rule:MF_00199, ECO:0000256|SAAS:SAAS00088338}; EC=3.6.1.41 {ECO:0000256|HAMAP-Rule:MF_00199, ECO:0000256|SAAS:SAAS00088330};; Ap4A hydrolase {ECO:0000256|HAMAP-Rule:MF_00199}; Diadenosine 5',5'''-P1,P4-tetraphosphate pyrophosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00199}; Diadenosine tetraphosphatase {ECO:0000256|HAMAP-Rule:MF_00199}; TaxID=1444150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-156-04_S3_C2.;"
Bis(5'-nucleosyl)-tetraphosphatase, symmetrical n=280 Tax=Escherichia coli RepID=APAH_ECO57
L3_105_245G1_scaffold_570_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(831..1208)
DNA (378bp) protein (126aa)
Protein ApaG n=1175 Tax=Enterobacteriaceae RepID=APAG_ECO24
Co2+ and Mg2+ efflux associated protein ApaG
Protein ApaG {ECO:0000256|HAMAP-Rule:MF_00791, ECO:0000256|SAAS:SAAS00014786}; TaxID=1446580 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O123:H11 str. 2009C-3307.;"
L3_105_245G1_scaffold_570_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1211..2032)
DNA (822bp) protein (274aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rule:MF_00607}; 16S rRNA dimethylase {ECO:0000256|HAMAP-Rule:MF_00607}; S-adenosylmethionine-6-N', N'-adenosyl(rRNA) dimethyltransferase {ECO:0000256|HAMAP-Rule:MF_00607}; TaxID=1444184 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-460-02_S3_C3.;"
Ribosomal RNA small subunit methyltransferase A n=574 Tax=Enterobacteriaceae RepID=RSMA_ECO7I
rsmA; 16S rRNA dimethyladenosine transferase, SAM-dependent
L3_105_245G1_scaffold_570_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2029..3018)
DNA (990bp) protein (330aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosphohydroxy)-L-threonine dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536}; TaxID=1444231 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-156-04_S4_C2.;"
4-hydroxythreonine-4-phosphate dehydrogenase n=373 Tax=Enterobacteriaceae RepID=PDXA_ECO24
pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase
L3_105_245G1_scaffold_570_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3018..4304)
DNA (1287bp) protein (429aa)
peptidyl-prolyl cis-trans isomerase SurA (EC:5.2.1.8)
Chaperone SurA n=1232 Tax=Enterobacteriaceae RepID=SURA_ECO57
Chaperone SurA {ECO:0000256|HAMAP-Rule:MF_01183, ECO:0000256|SAAS:SAAS00043023}; Peptidyl-prolyl cis-trans isomerase SurA {ECO:0000256|HAMAP-Rule:MF_01183}; Rotamase SurA {ECO:0000256|HAMAP-Rule:MF_01183}; Flags: Precursor;; TaxID=1116032 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2871950.;"
L3_105_245G1_scaffold_570_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4357..6711)
DNA (2355bp) protein (785aa)
LPS-assembly protein LptD n=501 Tax=Enterobacteriaceae RepID=LPTD_ECOLI
imp; organic solvent tolerance protein
LPS-assembly protein LptD {ECO:0000256|HAMAP-Rule:MF_01411, ECO:0000256|SAAS:SAAS00019908}; Flags: Precursor;; TaxID=1281218 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3212-1.;"
L3_105_245G1_scaffold_570_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6966..7781
DNA (816bp) protein (272aa)
DnaJ-like protein DjlA n=6 Tax=Enterobacteriaceae RepID=F4NLC5_9ENTR
djlA; Dna-J like membrane chaperone protein
DnaJ-like protein DjlA {ECO:0000256|HAMAP-Rule:MF_01153}; TaxID=1125638 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MP020980.1.;"
L3_105_245G1_scaffold_570_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7898..8557)
DNA (660bp) protein (220aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1444212 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-366-08_S4_C1.;"
Pseudouridine synthase n=6 Tax=Escherichia coli RepID=B3XIN0_ECOLX
ribosomal large subunit pseudouridine synthase A
L3_105_245G1_scaffold_570_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8569..11475)
DNA (2907bp) protein (969aa)
RNA polymerase-associated protein RapA {ECO:0000256|HAMAP-Rule:MF_01821, ECO:0000256|SAAS:SAAS00010031}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01821, ECO:0000256|SAAS:SAAS00010033};; ATP-dependent helicase HepA {ECO:0000256|HAMAP-Rule:MF_01821}; TaxID=1446560 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O121:H19 str. 2010C-3609.;"
RNA polymerase-associated protein RapA n=537 Tax=Enterobacteriaceae RepID=RAPA_ECO45
ATP-dependent helicase HepA
L3_105_245G1_scaffold_570_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11640..13991)
DNA (2352bp) protein (784aa)
DNA polymerase {ECO:0000256|RuleBase:RU000442}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU000442};; TaxID=556266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli D9.;"
DNA polymerase n=154 Tax=Enterobacteriaceae RepID=B6HZ40_ECOSE
polB; DNA polymerase II
L3_105_245G1_scaffold_570_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14066..14761)
DNA (696bp) protein (232aa)
araD; L-ribulose-5-phosphate 4-epimerase (EC:5.1.3.4)
L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:EGJ06951.1}; EC=5.1.3.4 {ECO:0000313|EMBL:EGJ06951.1};; TaxID=556266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli D9.;"
L-ribulose-5-phosphate 4-epimerase n=149 Tax=Enterobacteriaceae RepID=A7ZHF2_ECO24
L3_105_245G1_scaffold_570_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14930..16432)
DNA (1503bp) protein (501aa)
araA; L-arabinose isomerase (EC:5.3.1.4)
L-arabinose isomerase {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909}; EC=5.3.1.4 {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909};; TaxID=1269007 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 909945-2.;"
L-arabinose isomerase n=593 Tax=Enterobacteriaceae RepID=ARAA_ECO24
L3_105_245G1_scaffold_570_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16443..18143)
DNA (1701bp) protein (567aa)
araB; ribulokinase (EC:2.7.1.16)
Ribulokinase {ECO:0000256|HAMAP-Rule:MF_00520, ECO:0000256|RuleBase:RU003455}; EC=2.7.1.16 {ECO:0000256|HAMAP-Rule:MF_00520, ECO:0000256|RuleBase:RU003455};; TaxID=1268996 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908541.;"
Ribulokinase n=102 Tax=Escherichia coli RepID=ARAB_ECO55
L3_105_245G1_scaffold_570_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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18482..19360
DNA (879bp) protein (293aa)
Arabinose operon regulatory protein n=924 Tax=Enterobacteriaceae RepID=ARAC_ECO57
araC; DNA-binding transcriptional regulator AraC
Transcriptional regulator {ECO:0000313|EMBL:EZD90286.1}; TaxID=1446698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O157:NM str. 08-4540.;"
L3_105_245G1_scaffold_570_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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19446..20210
DNA (765bp) protein (255aa)
Uncharacterized protein n=297 Tax=Enterobacteriaceae RepID=J7R098_ECOLX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFS76109.1}; TaxID=1133852 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O104:H4 (strain 2011C-3493).;"
L3_105_245G1_scaffold_570_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(20324..21022)
DNA (699bp) protein (233aa)
Thiamine import ATP-binding protein ThiQ {ECO:0000256|HAMAP-Rule:MF_01723}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01723};; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
Thiamin ABC transporter ATP-binding component n=191 Tax=Escherichia coli RepID=B6HZ46_ECOSE
thiQ; thiamin transporter subunit ThiQ
L3_105_245G1_scaffold_570_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21006..22616)
DNA (1611bp) protein (537aa)
Thiamin ABC transporter permease component n=134 Tax=Enterobacteriaceae RepID=B6HZ47_ECOSE
thiP; fused thiamin transporter subunits of ABC superfamily: membrane components
Thiamine/thiamine pyrophosphate ABC transporter, permease protein {ECO:0000313|EMBL:EGB86885.1}; TaxID=749539 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 117-3.;"
L3_105_245G1_scaffold_570_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(22592..23575)
DNA (984bp) protein (328aa)
Thiamin-binding periplasmic protein n=264 Tax=Enterobacteriaceae RepID=J7QWU4_ECOLX
tbpA; thiamine transporter substrate binding subunit
Thiamin/thiamine pyrophosphate ABC transporter, thiamin/thiamine pyrophospate-binding protein {ECO:0000313|EMBL:ENA37092.1}; TaxID=1116113 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli BCE007_MS-11.;"
Displaying 18 items

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