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L3_105_245G1_scaffold_597

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_245G1_scaffold_597_1
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8..1402)
DNA (1395bp) protein (465aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534, ECO:0000256|SAAS:SAAS00089453};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
asnS; asparaginyl-tRNA synthetase (EC:6.1.1.22)
Asparagine--tRNA ligase n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQR9_9FIRM
L3_105_245G1_scaffold_597_2
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1498..2910)
DNA (1413bp) protein (471aa)
Amino acid permease n=2 Tax=Clostridiales RepID=U2APL0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO32947.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
amino acid permease-associated protein
L3_105_245G1_scaffold_597_3
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2943..3341)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2B7K5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI67768.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_105_245G1_scaffold_597_4
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3483..3881)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2CEU4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI67767.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_105_245G1_scaffold_597_5
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3881..4711)
DNA (831bp) protein (277aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CEK4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32944.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_105_245G1_scaffold_597_6
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4727..5161)
DNA (435bp) protein (145aa)
LytTr DNA-binding domain protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQR4_9FIRM
LytTr DNA-binding domain protein {ECO:0000313|EMBL:EHM50942.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
response regulator
L3_105_245G1_scaffold_597_7
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5354..6154)
DNA (801bp) protein (267aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CEK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32942.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_105_245G1_scaffold_597_8
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6286..7386
DNA (1101bp) protein (367aa)
pscK; pseudouridine kinase (EC:2.7.1.-)
HTH domain protein n=3 Tax=Clostridiales RepID=G9YQR2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32941.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_105_245G1_scaffold_597_9
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7383..7913
DNA (531bp) protein (177aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=G9YQR1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32940.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
L3_105_245G1_scaffold_597_10
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7964..8887
DNA (924bp) protein (308aa)
Pseudouridine-5'-phosphate glycosidase {ECO:0000256|HAMAP-Rule:MF_01876}; Short=PsiMP glycosidase {ECO:0000256|HAMAP-Rule:MF_01876};; EC=4.2.1.70 {ECO:0000256|HAMAP-Rule:MF_01876};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
Pseudouridine-5'-phosphate glycosidase n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CEJ9_9FIRM
hypothetical protein
L3_105_245G1_scaffold_597_11
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9076..11190
DNA (2115bp) protein (705aa)
5'-nucleotidase protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQQ9_9FIRM
5'-nucleotidase protein {ECO:0000313|EMBL:EHM50937.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
hypothetical protein
L3_105_245G1_scaffold_597_12
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11443..12750)
DNA (1308bp) protein (436aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
Glycosyl hydrolase family 3 protein n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQQ8_9FIRM
glycoside hydrolase family 3
L3_105_245G1_scaffold_597_13
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12747..14828)
DNA (2082bp) protein (694aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
rnr; Ribonuclease R (EC:3.1.13.1)
Ribonuclease R n=1 Tax=Flavonifractor plautii ATCC 29863 RepID=G9YQQ7_9FIRM
L3_105_245G1_scaffold_597_14
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14970..15239)
DNA (270bp) protein (90aa)
Preprotein translocase, SecG subunit n=2 Tax=Clostridiales RepID=G9YQQ6_9FIRM
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:ERI67757.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
secG; preprotein translocase SecG subunit
L3_105_245G1_scaffold_597_15
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15350..17116)
DNA (1767bp) protein (589aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CEJ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF56753.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
L3_105_245G1_scaffold_597_16
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17106..17873)
DNA (768bp) protein (256aa)
sulfate-transporting ATPase (EC:3.6.3.25)
ABC transporter, ATP-binding protein n=2 Tax=Clostridiales RepID=G9YQQ4_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EHM50932.1}; TaxID=411475 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Flavonifractor plautii ATCC 29863.;"
L3_105_245G1_scaffold_597_17
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18065..18433
DNA (369bp) protein (123aa)
Putative uncharacterized protein n=2 Tax=Clostridiales RepID=H1CEJ2_9FIRM
Putative endoribonuclease L-PSP {ECO:0000313|EMBL:ERI67754.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
endoribonuclease L-PSP
L3_105_245G1_scaffold_597_18
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18663..19994
DNA (1332bp) protein (444aa)
Xanthine permease n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1CEJ1_9FIRM
Xanthine permease {ECO:0000313|EMBL:EHO32931.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_105_245G1_scaffold_597_19
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20038..20676)
DNA (639bp) protein (213aa)
YheO-like protein n=3 Tax=Clostridiales RepID=G9YQQ0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO32930.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
hypothetical protein
L3_105_245G1_scaffold_597_20
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21020..22360
DNA (1341bp) protein (447aa)
Putative chlorohydrolase/aminohydrolase n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2APJ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:KGF56748.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
hypothetical protein
Displaying 20 items

View Taxonomy