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L3_105_245G1_scaffold_603

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_245G1_scaffold_603_1
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(285..833)
DNA (549bp) protein (183aa)
Acyltransferase n=1 Tax=Roseburia intestinalis L1-82 RepID=C7G9M0_9FIRM
Acyltransferase {ECO:0000313|EMBL:EEV01570.1}; TaxID=536231 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis L1-82.;"
Fucose 4-O-acetylase and related acetyltransferases
L3_105_245G1_scaffold_603_2
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(887..2089)
DNA (1203bp) protein (401aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HRS7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE95794.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
glycosyl transferase
L3_105_245G1_scaffold_603_3
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2128..3705)
DNA (1578bp) protein (526aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EEG56854.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEG56854.1};; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVP3_9CLOT
Glycosyltransferases involved in cell wall biogenesis
L3_105_245G1_scaffold_603_4
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3690..5051)
DNA (1362bp) protein (454aa)
mannose-6-phosphate isomerase (EC:5.3.1.8)
Putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVP4_9CLOT
Putative mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase {ECO:0000313|EMBL:EEG56855.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
L3_105_245G1_scaffold_603_5
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5048..5935)
DNA (888bp) protein (296aa)
Transketolase, C-terminal domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVP5_9CLOT
Transketolase, C-terminal domain protein {ECO:0000313|EMBL:EEG56856.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
transketolase subunit B
L3_105_245G1_scaffold_603_6
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5948..6490)
DNA (543bp) protein (181aa)
Hydrolase, NUDIX family n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVP6_9CLOT
Hydrolase, NUDIX family {ECO:0000313|EMBL:EEG56857.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
NUDIX hydrolase
L3_105_245G1_scaffold_603_7
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6459..7259)
DNA (801bp) protein (267aa)
Transketolase, thiamine diphosphate binding domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVP7_9CLOT
Transketolase, thiamine diphosphate binding domain protein {ECO:0000313|EMBL:EEG56858.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
transketolase
L3_105_245G1_scaffold_603_8
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7256..8266)
DNA (1011bp) protein (337aa)
HMGL-like protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVP8_9CLOT
HMGL-like protein {ECO:0000313|EMBL:EEG56859.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L3_105_245G1_scaffold_603_9
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8290..9504)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVP9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG56860.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L3_105_245G1_scaffold_603_10
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9517..11316)
DNA (1800bp) protein (600aa)
Thiamine pyrophosphate enzyme, central domain protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVQ1_9CLOT
Thiamine pyrophosphate enzyme, central domain protein {ECO:0000313|EMBL:EEG56862.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
thiamine pyrophosphate protein central region
L3_105_245G1_scaffold_603_11
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11346..12167)
DNA (822bp) protein (274aa)
Oxidoreductase, aldo/keto reductase family protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVQ2_9CLOT
Oxidoreductase, aldo/keto reductase family protein {ECO:0000313|EMBL:EEG56863.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
aldo/keto reductase
L3_105_245G1_scaffold_603_12
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12169..13125)
DNA (957bp) protein (319aa)
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
GDP-L-fucose synthase n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVQ3_9CLOT
nad-dependent epimerase/dehydratase
L3_105_245G1_scaffold_603_13
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13106..14275)
DNA (1170bp) protein (390aa)
DegT/DnrJ/EryC1/StrS aminotransferase family protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVQ4_9CLOT
DegT/DnrJ/EryC1/StrS aminotransferase family protein {ECO:0000313|EMBL:EEG56865.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
pyridoxamine 5-phosphate oxidase
L3_105_245G1_scaffold_603_14
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14278..15318)
DNA (1041bp) protein (347aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
rmlB_1; dTDP-glucose 4,6-dehydratase, RmlB_1 (EC:4.2.1.46)
GDP-mannose 4,6-dehydratase n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVQ5_9CLOT
L3_105_245G1_scaffold_603_15
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15315..16475)
DNA (1161bp) protein (387aa)
Uncharacterized protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVQ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEG56867.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
hypothetical protein
L3_105_245G1_scaffold_603_16
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16476..17222)
DNA (747bp) protein (249aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVQ7_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEG56868.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
ABC-type polysaccharide/polyol phosphate transport system, ATPase component
L3_105_245G1_scaffold_603_17
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17233..18021)
DNA (789bp) protein (263aa)
ABC-2 type transporter n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVQ8_9CLOT
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
ABC-type polysaccharide/polyol phosphate export systems, permease component
L3_105_245G1_scaffold_603_18
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18053..19087)
DNA (1035bp) protein (345aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EEQ62091.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEQ62091.1};; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EW33_9FIRM
glycosyltransferase family 2 candidate b-glycosyltransferase
L3_105_245G1_scaffold_603_19
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19157..19987)
DNA (831bp) protein (277aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EEG56872.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEG56872.1};; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981.;"
Glycosyltransferase, group 2 family protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0CVR1_9CLOT
Glycosyltransferases, probably involved in cell wall biogenesis
L3_105_245G1_scaffold_603_20
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20147..21499)
DNA (1353bp) protein (451aa)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533 / WM1) RepID=D9R4I8_CLOSW
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase {ECO:0000313|EMBL:ADL03172.1}; TaxID=610130 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium saccharolyticum (strain ATCC 35040 / DSM 2544 / NRCC 2533; / WM1).;"
L3_105_245G1_scaffold_603_21
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21731..22351)
DNA (621bp) protein (207aa)
Uncharacterized protein n=3 Tax=Clostridium bolteae RepID=A8RKT2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP18340.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
O-Antigen ligase.
L3_105_245G1_scaffold_603_22
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22345..23286)
DNA (942bp) protein (314aa)
Putative uncharacterized protein n=1 Tax=Clostridium clostridioforme 2_1_49FAA RepID=G5I2G9_9CLOT
O-antigen ligase {ECO:0000313|EMBL:KJJ65593.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
L3_105_245G1_scaffold_603_23
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23551..24060
DNA (510bp) protein (170aa)
Transposase IS30 family n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9H1_9CLOT
Transposase, IS30 family {ECO:0000313|EMBL:EXG87039.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
transposase and inactivated derivatives IS30 family-like protein
L3_105_245G1_scaffold_603_24
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24208..24681
DNA (474bp) protein (158aa)
Archaeal ATPase n=1 Tax=Firmicutes bacterium CAG:424 RepID=R6RHB3_9FIRM
Archaeal ATPase {ECO:0000313|EMBL:KJJ75296.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
ATPase
L3_105_245G1_scaffold_603_25
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24746..25882)
DNA (1137bp) protein (379aa)
Putative uncharacterized protein n=1 Tax=Clostridium citroniae WAL-17108 RepID=G5HRV0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE95817.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
Choline binding protein PcpA
L3_105_245G1_scaffold_603_26
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25990..27732)
DNA (1743bp) protein (581aa)
Cell wall binding repeat-containing protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9X3D9_9CLOT
Cell wall binding repeat-containing protein {ECO:0000313|EMBL:ENZ09846.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
cell wall binding repeat-containing protein
L3_105_245G1_scaffold_603_27
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28271..28825
DNA (555bp) protein (185aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YD63_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ09848.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
cell wall binding repeat-containing protein
L3_105_245G1_scaffold_603_28
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(28929..29303)
DNA (375bp) protein (125aa)
50S ribosomal protein L7/L12 n=1 Tax=Clostridium sp. CAG:58 RepID=R6RR50_9CLOT
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
LSU ribosomal protein L12P
L3_105_245G1_scaffold_603_29
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(29367..29867)
DNA (501bp) protein (167aa)
50S ribosomal protein L10 n=1 Tax=Clostridium sp. CAG:7 RepID=R5J6P8_9CLOT
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
LSU ribosomal protein L10P
L3_105_245G1_scaffold_603_30
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(30194..30889)
DNA (696bp) protein (232aa)
50S ribosomal protein L1 n=16 Tax=Clostridium RepID=A8S466_9CLOT
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
ribosomal protein L1, bacterial/chloroplast
Displaying items 1-30 of 36 in total

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