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L3_105_245G1_scaffold_647

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_245G1_scaffold_647_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1..138
DNA (138bp) protein (46aa)
Alkaline phosphatase n=1 Tax=Escherichia coli UMEA 3201-1 RepID=T9BGF9_ECOLX
phoA; alkaline phosphatase
Alkaline phosphatase {ECO:0000313|EMBL:EOW10480.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE100.;"
L3_105_245G1_scaffold_647_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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257..577
DNA (321bp) protein (107aa)
Phosphate starvation-inducible protein PsiF n=1242 Tax=Enterobacteriaceae RepID=PSIF_ECOL6
PsiF repeat protein
PsiF repeat protein {ECO:0000313|EMBL:ESA82020.1}; TaxID=1268986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 907713.;"
L3_105_245G1_scaffold_647_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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679..1794
DNA (1116bp) protein (372aa)
Protein AdrA n=506 Tax=Enterobacteriaceae RepID=ADRA_ECOL6
adrA; diguanylate cyclase AdrA
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EFK70786.1}; TaxID=679205 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 124-1.;"
L3_105_245G1_scaffold_647_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1811..2620)
DNA (810bp) protein (270aa)
pyrroline-5-carboxylate reductase (EC:1.5.1.2)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903};; PCA reductase {ECO:0000256|HAMAP-Rule:MF_01925}; TaxID=1444266 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-427-07_S4_C3.;"
Pyrroline-5-carboxylate reductase n=603 Tax=Enterobacteriaceae RepID=P5CR_ECOLI
L3_105_245G1_scaffold_647_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2740..3198
DNA (459bp) protein (153aa)
UPF0178 protein YaiI n=7 Tax=Escherichia coli RepID=H5KR33_ECOLX
yaiI; hypothetical protein
UPF0178 protein YaiI {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=1444156 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C2.;"
L3_105_245G1_scaffold_647_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3381..3905
DNA (525bp) protein (175aa)
aroL; shikimate kinase II (EC:2.7.1.71)
Shikimate kinase 2 {ECO:0000256|HAMAP-Rule:MF_01269, ECO:0000256|SAAS:SAAS00003442}; Short=SK 2 {ECO:0000256|HAMAP-Rule:MF_01269};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_01269, ECO:0000256|SAAS:SAAS00003395};; TaxID=869669 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2741.;"
Shikimate kinase 2 n=1193 Tax=Enterobacteriaceae RepID=AROL_ECO24
L3_105_245G1_scaffold_647_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3955..4146
DNA (192bp) protein (64aa)
Uncharacterized protein YaiA n=1166 Tax=Enterobacteriaceae RepID=YAIA_ECO57
yaiA; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZD89589.1}; TaxID=1446698 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O157:NM str. 08-4540.;"
L3_105_245G1_scaffold_647_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4404..5081
DNA (678bp) protein (226aa)
Protein AroM n=324 Tax=Enterobacteriaceae RepID=AROM_ECOLI
hypothetical protein
Protein AroM {ECO:0000313|EMBL:ELE04555.1}; TaxID=1182658 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE51.;"
L3_105_245G1_scaffold_647_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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5153..5437
DNA (285bp) protein (95aa)
UPF0345 protein YaiE n=1379 Tax=Enterobacteriaceae RepID=YAIE_ECO24
hypothetical protein
UPF0345 protein YaiE {ECO:0000256|HAMAP-Rule:MF_01537}; TaxID=1444185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-474-04_S3_C3.;"
L3_105_245G1_scaffold_647_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6084..7061)
DNA (978bp) protein (326aa)
Recombination-associated protein rdgC n=3 Tax=Escherichia coli RepID=R8XHY1_ECOLX
rdgC; Recombination-associated protein rdgC
Recombination-associated protein RdgC {ECO:0000256|HAMAP-Rule:MF_00194, ECO:0000256|SAAS:SAAS00073315}; TaxID=656414 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H736.;"
L3_105_245G1_scaffold_647_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7120..8028
DNA (909bp) protein (303aa)
Manno(Fructo)kinase n=141 Tax=Escherichia coli RepID=A7ZX43_ECOHS
fructokinase
Fructokinase {ECO:0000313|EMBL:ESP10093.1}; TaxID=1280986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 36 (4-5675286).;"
L3_105_245G1_scaffold_647_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8171..9439)
DNA (1269bp) protein (423aa)
Protein AraJ n=92 Tax=Enterobacteriaceae RepID=E7SNI6_SHIDY
MFS transporter {ECO:0000313|EMBL:KDV39337.1}; TaxID=1446599 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O146:H21 str. 2010C-3325.;"
araJ; MFS transport protein AraJ
L3_105_245G1_scaffold_647_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9481..12624)
DNA (3144bp) protein (1048aa)
Nuclease SbcCD, C subunit n=2 Tax=Escherichia coli RepID=B3IIY3_ECOLX
Nuclease sbcCD subunit C {ECO:0000313|EMBL:EOW10625.1}; TaxID=1182701 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE102.;"
sbcC; exonuclease SbcC
L3_105_245G1_scaffold_647_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12621..13823)
DNA (1203bp) protein (401aa)
Nuclease SbcCD n=2 Tax=Escherichia coli RepID=E9W6F1_ECOLX
exonuclease subunit SbcD
Nuclease sbcCD subunit D {ECO:0000313|EMBL:KEN92381.1}; TaxID=1444123 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-222-05_S3_C1.;"
L3_105_245G1_scaffold_647_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14013..14702
DNA (690bp) protein (230aa)
Phosphate regulon transcriptional regulatory protein PhoB n=1320 Tax=Enterobacteriaceae RepID=PHOB_ECO57
winged helix family two component transcriptional regulator PhoB
Phosphate regulon transcriptional regulatory protein PhoB {ECO:0000313|EMBL:EFK21982.1}; TaxID=749527 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli (strain MS 21-1).;"
L3_105_245G1_scaffold_647_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14760..16055
DNA (1296bp) protein (432aa)
phoR; phosphate regulon sensor protein (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1280986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 36 (4-5675286).;"
Phosphate regulon sensor protein phoR n=421 Tax=Enterobacteriaceae RepID=E2QGE4_ECOLX
L3_105_245G1_scaffold_647_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16462..17781
DNA (1320bp) protein (440aa)
Branched-chain amino acid transport system 2 carrier protein n=885 Tax=Enterobacteriaceae RepID=BRNQ_ECO57
brnQ; branched chain amino acid transport system II carrier protein
Branched-chain amino acid transport system II carrier protein {ECO:0000313|EMBL:EYE07958.1}; TaxID=1444215 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1-110-08_S4_C1.;"
L3_105_245G1_scaffold_647_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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17857..19230
DNA (1374bp) protein (458aa)
Proline-specific permease ProY n=875 Tax=Enterobacteriaceae RepID=PROY_ECO57
amino acid permease
Proline-specific permease {ECO:0000313|EMBL:CBG33267.1}; TaxID=216592 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O44:H18 (strain 042 / EAEC).;"
L3_105_245G1_scaffold_647_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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19386..20885
DNA (1500bp) protein (500aa)
malZ; maltodextrin glucosidase (EC:3.2.1.20)
Maltodextrin glucosidase n=8 Tax=Escherichia coli RepID=B7M3P2_ECO8A
Maltodextrin glucosidase {ECO:0000313|EMBL:ESP10085.1}; TaxID=1280986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 36 (4-5675286).;"
Displaying 19 items

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