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L3_105_245G1_scaffold_650

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_245G1_scaffold_650_1
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(47..1486)
DNA (1440bp) protein (480aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBT2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77226.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
hypothetical protein
L3_105_245G1_scaffold_650_2
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2003..2980
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBT1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77225.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Predicted phosphosugar isomerases
L3_105_245G1_scaffold_650_3
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3005..3691
DNA (687bp) protein (229aa)
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED (EC:5.4.2.6)
HAD hydrolase, family IA n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBT0_9FIRM
HAD hydrolase, family IA {ECO:0000313|EMBL:EES77224.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_105_245G1_scaffold_650_4
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3675..4097
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBS9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77223.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Phosphotransferase system, mannose/fructose-specific component IIA
L3_105_245G1_scaffold_650_5
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4094..4558
DNA (465bp) protein (155aa)
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB (EC:2.7.1.69)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBS8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77222.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_105_245G1_scaffold_650_6
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4574..5317
DNA (744bp) protein (248aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=T5M0J6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQM99406.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC
L3_105_245G1_scaffold_650_7
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5317..6144
DNA (828bp) protein (276aa)
PTS system, mannose/fructose/sorbose-specific IID component (EC:2.7.1.69)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBS7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77221.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
L3_105_245G1_scaffold_650_8
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6394..6651
DNA (258bp) protein (86aa)
HPr family phosphocarrier n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBS6_9FIRM
HPr family phosphocarrier {ECO:0000313|EMBL:EES77220.1}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Phosphotransferase System HPr (HPr) Family
L3_105_245G1_scaffold_650_9
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6687..8306
DNA (1620bp) protein (540aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
phosphoenolpyruvate--protein phosphotransferase (EC:2.7.3.9)
Phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBS5_9FIRM
L3_105_245G1_scaffold_650_10
Ruminococcus sp. 5_1_39BFAA, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8474..9232)
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. 5_1_39BFAA RepID=C6JBS4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EES77218.2}; TaxID=457412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus sp. 5_1_39BFAA.;"
Transcriptional regulators
L3_105_245G1_scaffold_650_11
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9554..10432
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IG31_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41058.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
YicC domain-containing protein
L3_105_245G1_scaffold_650_12
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10455..11087
DNA (633bp) protein (211aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
guanylate kinase (EC:2.7.4.8)
Guanylate kinase n=1 Tax=Clostridium sp. CAG:7 RepID=R5ILA0_9CLOT
L3_105_245G1_scaffold_650_13
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11180..11473
DNA (294bp) protein (98aa)
DNA-directed RNA polymerase, omega subunit (EC:2.7.7.6)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RUF4_9CLOT
DNA-directed RNA polymerase, omega subunit {ECO:0000313|EMBL:ENZ52312.1}; TaxID=997894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] bolteae 90A9.;"
L3_105_245G1_scaffold_650_14
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11577..12959
DNA (1383bp) protein (461aa)
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865};; EC=2.8.4.4 {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00179441};; Ribosomal protein S12 (aspartate-C(3))-methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01865}; Ribosome maturation factor RimO {ECO:0000256|HAMAP-Rule:MF_01865}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
SSU ribosomal protein S12P methylthiotransferase (EC:1.3.1.74 2.-.-.-)
Ribosomal protein S12 methylthiotransferase RimO n=1 Tax=Clostridium sp. CAG:7 RepID=R5IWJ1_9CLOT
L3_105_245G1_scaffold_650_15
Clostridium bolteae CAG:59, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12943..13485
DNA (543bp) protein (181aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
Uncharacterized protein n=8 Tax=Clostridium RepID=A8RUF2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX96950.1}; TaxID=1263064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bolteae CAG:59.;"
L3_105_245G1_scaffold_650_16
Clostridiales bacterium 1_7_47FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13487..14743
DNA (1257bp) protein (419aa)
Putative competence-damage inducible protein n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUH9_9FIRM
Putative competence-damage inducible protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=457421 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium 1_7_47FAA.;"
competence/damage-inducible protein CinA
L3_105_245G1_scaffold_650_17
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14755..16065
DNA (1311bp) protein (437aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ILA4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41064.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_105_245G1_scaffold_650_18
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16078..16398
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IG76_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41065.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_105_245G1_scaffold_650_19
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16410..17315
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IWJ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41066.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_105_245G1_scaffold_650_20
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17361..17789
DNA (429bp) protein (143aa)
Sporulation protein YtfJ n=1 Tax=Clostridiales bacterium 1_7_47FAA RepID=C5EUI3_9FIRM
Sporulation protein YtfJ (Spore_YtfJ) {ECO:0000313|EMBL:KJJ76520.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
Sporulation protein YtfJ
L3_105_245G1_scaffold_650_21
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17895..18032
DNA (138bp) protein (46aa)
Uncharacterized protein n=9 Tax=Clostridium RepID=A8RUE6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ10604.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
hypothetical protein
L3_105_245G1_scaffold_650_22
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(18086..18271)
DNA (186bp) protein (62aa)
50S ribosomal protein L28 n=2 Tax=Clostridiales RepID=C5EUI5_9FIRM
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
50S ribosomal protein L28
L3_105_245G1_scaffold_650_23
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18445..18801
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IG81_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41070.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
hypothetical protein
L3_105_245G1_scaffold_650_24
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18815..20524
DNA (1710bp) protein (570aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IWC1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41072.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
DAK2 domain fusion protein YloV
L3_105_245G1_scaffold_650_25
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20546..21256
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ILB0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41074.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
Integral membrane protein, interacts with FtsH
L3_105_245G1_scaffold_650_26
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21344..22225
DNA (882bp) protein (294aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5IWC6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41077.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ROK family protein
L3_105_245G1_scaffold_650_27
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22222..24279
DNA (2058bp) protein (686aa)
ATP-dependent DNA helicase RecG n=1 Tax=Clostridium sp. CAG:7 RepID=R5IG46_9CLOT
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:CCY41078.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
ATP-dependent DNA helicase RecG
L3_105_245G1_scaffold_650_28
Clostridium clostridioforme CAG:132, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24296..24811
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6K463_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDB64866.1}; TaxID=1263065 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium clostridioforme CAG:132.;"
Nitroreductase
L3_105_245G1_scaffold_650_29
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24967..25170
DNA (204bp) protein (68aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:7 RepID=R5ILB4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY41079.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
alpha/beta type small acid-soluble spore protein
L3_105_245G1_scaffold_650_30
Clostridium sp. CAG:7, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25332..25889
DNA (558bp) protein (186aa)
RsmD family RNA methyltransferase n=1 Tax=Clostridium sp. CAG:7 RepID=R5IG91_9CLOT
RsmD family RNA methyltransferase {ECO:0000313|EMBL:CCY41080.1}; TaxID=1262832 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:7.;"
methyltransferase
Displaying items 1-30 of 34 in total

View Taxonomy