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L3_105_245G1_scaffold_665

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Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_245G1_scaffold_665_1
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

133..900
DNA (768bp) protein (256aa)
Aspartate racemase n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y3B0_BILWA
Aspartate racemase {ECO:0000313|EMBL:EFV45495.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
aspartate racemase
L3_105_245G1_scaffold_665_2
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

953..2287
DNA (1335bp) protein (445aa)
Nucleotide sugar dehydrogenase n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y3B1_BILWA
Nucleotide sugar dehydrogenase {ECO:0000313|EMBL:EFV45496.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
nucleotide sugar dehydrogenase
L3_105_245G1_scaffold_665_3
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2548..3606
DNA (1059bp) protein (353aa)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
dTDP-glucose 4,6-dehydratase n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y3B2_BILWA
dTDP-glucose 4,6-dehydratase
L3_105_245G1_scaffold_665_4
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3856..4407)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y3B3_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EFV45498.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
glycosyl transferase family protein
L3_105_245G1_scaffold_665_5
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4432..4623)
DNA (192bp) protein (64aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y3B4_BILWA
glucose-1-phosphate thymidylyltransferase
L3_105_245G1_scaffold_665_6
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4796..5335)
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y3B5_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EFV45500.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
4Fe-4S ferredoxin
L3_105_245G1_scaffold_665_7
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5431..7500)
DNA (2070bp) protein (690aa)
Thiosulfate reductase n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y3B6_BILWA
Thiosulfate reductase {ECO:0000313|EMBL:EFV45501.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
molybdopterin oxidoreductase
L3_105_245G1_scaffold_665_8
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7894..8316)
DNA (423bp) protein (141aa)
Uncharacterized protein n=2 Tax=Bilophila RepID=E5Y3B7_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EGW45121.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
hypothetical protein
L3_105_245G1_scaffold_665_9
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8372..9181)
DNA (810bp) protein (270aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
truA; tRNA pseudouridine synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V3Q5_9DELT
L3_105_245G1_scaffold_665_10
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9304..9954)
DNA (651bp) protein (217aa)
Redox-sensing transcriptional repressor Rex n=2 Tax=Bilophila RepID=E5Y3B9_BILWA
Redox-sensing transcriptional repressor Rex {ECO:0000256|HAMAP-Rule:MF_01131}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
redox-sensing transcriptional repressor Rex
L3_105_245G1_scaffold_665_11
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10069..10404)
DNA (336bp) protein (112aa)
ATP synthase subunit C n=2 Tax=Bilophila RepID=E5Y3C0_BILWA
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242778}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
atpC; F0F1-type ATP synthase, subunit c
L3_105_245G1_scaffold_665_12
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10474..11175)
DNA (702bp) protein (234aa)
ATP synthase subunit a n=2 Tax=Bilophila RepID=E5Y3C1_BILWA
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:MF_01393}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
atpB; ATP synthase F0 subunit A
L3_105_245G1_scaffold_665_13
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11342..11794)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y3C2_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EFV45507.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
ATP synthase I chain
L3_105_245G1_scaffold_665_14
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11769..12029)
DNA (261bp) protein (87aa)
ATP synthase I n=2 Tax=Bilophila RepID=E5Y3C3_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EGW45127.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
ATP synthase protein I
L3_105_245G1_scaffold_665_15
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12344..13459)
DNA (1116bp) protein (372aa)
lipid-A-disaccharide synthase (EC:2.4.1.182)
Lipid-A-disaccharide synthase n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y3C4_BILWA
Lipid-A-disaccharide synthase {ECO:0000313|EMBL:EFV45509.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
L3_105_245G1_scaffold_665_16
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13456..14424)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y3C5_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EFV45510.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
nucleoside recognition domain-containing protein
L3_105_245G1_scaffold_665_17
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14441..15298)
DNA (858bp) protein (286aa)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y3C6_BILWA
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:EFV45511.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
rfbD; dTDP-4-dehydrorhamnose reductase
L3_105_245G1_scaffold_665_18
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15568..16233
DNA (666bp) protein (222aa)
Sirohydrochlorin cobaltochelatase {ECO:0000256|PIRNR:PIRNR033579}; EC=4.99.1.3 {ECO:0000256|PIRNR:PIRNR033579};; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
Sirohydrochlorin cobaltochelatase (EC:4.99.1.3)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V3R4_9DELT
L3_105_245G1_scaffold_665_19
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16610..17734)
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y3C9_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EFV45485.1}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
2-nitropropane dioxygenase
L3_105_245G1_scaffold_665_20
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17817..19928)
DNA (2112bp) protein (704aa)
Uncharacterized protein n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y3D0_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EFV45486.2}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
endonuclease
L3_105_245G1_scaffold_665_21
unknown

Not on your lists

20342..21127
DNA (786bp) protein (262aa)

This feature has no annotations

L3_105_245G1_scaffold_665_22
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21449..22045)
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y3D1_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EFV45487.2}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
3'-5' exonuclease domain protein
L3_105_245G1_scaffold_665_23
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22047..23432)
DNA (1386bp) protein (462aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
tRNA modification GTPase MnmE n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y3D2_BILWA
trmE; tRNA modification GTPase TrmE
L3_105_245G1_scaffold_665_24
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23856..25103)
DNA (1248bp) protein (416aa)
Putative uncharacterized protein n=1 Tax=Bilophila sp. 4_1_30 RepID=G1V3S0_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EGW45107.1}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
single-stranded nucleic acid binding R3H domain-containing protein
L3_105_245G1_scaffold_665_25
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25128..26792)
DNA (1665bp) protein (555aa)
Membrane protein insertase YidC n=2 Tax=Bilophila RepID=E5Y3D4_BILWA
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane protein YidC {ECO:0000256|HAMAP-Rule:MF_01810}; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila sp. 4_1_30.;"
membrane protein insertase, YidC/Oxa1 family
L3_105_245G1_scaffold_665_26
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26997..27308)
DNA (312bp) protein (104aa)
Ribonuclease P protein component {ECO:0000256|SAAS:SAAS00143752}; EC=3.1.26.5 {ECO:0000256|SAAS:SAAS00143815};; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
Ribonuclease P protein component n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y3D6_BILWA
ribonuclease P
L3_105_245G1_scaffold_665_27
Bilophila wadsworthia, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27729..28382
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Bilophila wadsworthia 3_1_6 RepID=E5Y3D8_BILWA
Uncharacterized protein {ECO:0000313|EMBL:EFV45494.2}; TaxID=563192 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Bilophila.;" source="Bilophila wadsworthia 3_1_6.;"
hypothetical protein
Displaying 27 items

View Taxonomy