ggKbase home page

L3_105_245G1_scaffold_699

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_245G1_scaffold_699_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..237
DNA (237bp) protein (79aa)
Cytochrome c nitrite reductase, NrfD subunit n=3 Tax=Escherichia coli RepID=M8SIQ7_ECOLX
nrfD; NrfD protein
Nitrite reductase {ECO:0000313|EMBL:KJH07793.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
L3_105_245G1_scaffold_699_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

353..1975
DNA (1623bp) protein (541aa)
Cytochrome c-type biogenesis protein CcmF n=17 Tax=Escherichia coli RepID=E0J0C0_ECOLW
nrfE; heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfE
Heme lyase subunit NrfE {ECO:0000313|EMBL:EYV07517.1}; TaxID=1446560 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O121:H19 str. 2010C-3609.;"
L3_105_245G1_scaffold_699_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1968..2351
DNA (384bp) protein (128aa)
Part of formate-dependent nitrite reductase complex n=389 Tax=Enterobacteriaceae RepID=J7QJG9_ECOLX
nrfF; heme lyase (NrfEFG) for insertion of heme into c552, subunit NrfF
Formate-dependent nitrite reductase complex subunit nrfF {ECO:0000313|EMBL:EFZ57145.1}; TaxID=670890 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli LT-68.;"
L3_105_245G1_scaffold_699_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2348..2944
DNA (597bp) protein (199aa)
Formate-dependent nitrite reductase complex, subunit NrfG n=176 Tax=Enterobacteriaceae RepID=A8A7H7_ECOHS
formate-dependent nitrite reductase complex subunit NrfG
Formate-dependent nitrite reductase complex subunit NrfG {ECO:0000313|EMBL:EGI43006.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
L3_105_245G1_scaffold_699_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3286..4599
DNA (1314bp) protein (438aa)
Glutamate-aspartate symport protein n=836 Tax=Enterobacteriaceae RepID=C3SH62_ECOLX
gltP; glutamate/aspartate:proton symporter
Proton glutamate symporter protein {ECO:0000313|EMBL:ESK27461.1}; TaxID=1281241 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli UMEA 3323-1.;"
L3_105_245G1_scaffold_699_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4677..5366)
DNA (690bp) protein (230aa)
Sel1 repeat protein (Fragment) n=2 Tax=Escherichia coli RepID=D7ZZP6_ECOLX
hypothetical protein
Sel1 repeat protein {ECO:0000313|EMBL:EFJ85386.1}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 84-1.;"
L3_105_245G1_scaffold_699_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5460..7139)
DNA (1680bp) protein (560aa)
Formate dehydrogenase H n=1853 Tax=Enterobacteriaceae RepID=FDHF_ECOLI
formate dehydrogenase subunit alpha
Formate dehydrogenase, alpha subunit {ECO:0000313|EMBL:ESD65159.1}; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 908555.;"
L3_105_245G1_scaffold_699_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7188..7607)
DNA (420bp) protein (140aa)
Formate dehydrogenase-H, selenopolypeptide subunit n=335 Tax=Escherichia RepID=E2QJX1_ECOLX
formate dehydrogenase subunit alpha
Formate dehydrogenase H {ECO:0000313|EMBL:EOV73805.1}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE73.;"
L3_105_245G1_scaffold_699_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7805..9271)
DNA (1467bp) protein (489aa)
Efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family protein n=32 Tax=Escherichia coli RepID=E7JBS5_ECOLX
Multidrug resistance outer membrane protein mdtP {ECO:0000313|EMBL:ESP09668.1}; TaxID=1280986 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli HVH 36 (4-5675286).;"
yjcP; putative outer membrane efflux protein MdtP
L3_105_245G1_scaffold_699_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9268..11319)
DNA (2052bp) protein (684aa)
Multidrug efflux system protein MdtO n=109 Tax=Enterobacteriaceae RepID=M4JGX5_ECOLX
multidrug efflux system protein MdtO
Fusaric acid resistance protein conserved region {ECO:0000313|EMBL:EFO57815.1}; TaxID=679204 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 145-7.;"
L3_105_245G1_scaffold_699_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11319..12350)
DNA (1032bp) protein (344aa)
Multidrug resistance protein MdtN n=27 Tax=Enterobacteriaceae RepID=B3HIB0_ECOLX
Efflux pump membrane protein {ECO:0000313|EMBL:EIH23208.1}; TaxID=869675 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 1.2264.;"
multidrug resistance protein MdtN
L3_105_245G1_scaffold_699_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12369..12644)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Escherichia coli ATCC BAA-2193 RepID=V4VX11_ECOLX
ytcA; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKI47807.1}; TaxID=1005567 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli N1.;"
L3_105_245G1_scaffold_699_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12853..14838)
DNA (1986bp) protein (662aa)
Metallo-beta-lactamase superfamily protein n=5 Tax=Escherichia coli RepID=E7JBS9_ECOLX
hypothetical protein
YjcS protein {ECO:0000313|EMBL:EFE60282.2}; TaxID=550672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli B088.;"
L3_105_245G1_scaffold_699_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15091..15408
DNA (318bp) protein (106aa)
Uncharacterized protein n=263 Tax=Enterobacteriaceae RepID=C8TMX5_ECO26
hypothetical protein
Ribose 5-phosphate isomerase B {ECO:0000313|EMBL:EGI43017.1}; TaxID=656408 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli H591.;"
L3_105_245G1_scaffold_699_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15477..15806
DNA (330bp) protein (110aa)
Uncharacterized protein YjdP n=697 Tax=Enterobacteriaceae RepID=YJDP_ECOL6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHW09139.1}; TaxID=868172 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli DEC8C.;"
L3_105_245G1_scaffold_699_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15953..16711)
DNA (759bp) protein (253aa)
Phosphonate utilization protein n=268 Tax=Escherichia coli RepID=A8A7I9_ECOHS
phnP; carbon-phosphorus lyase complex accessory protein
Carbon-phosphorus lyase complex accessory protein {ECO:0000313|EMBL:CEK08225.1}; TaxID=244319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O26:H11.;"
L3_105_245G1_scaffold_699_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16713..17147)
DNA (435bp) protein (145aa)
Protein PhnO n=479 Tax=Enterobacteriaceae RepID=PHNO_ECOLI
phnO; aminoalkylphosphonic acid N-acetyltransferase
Acetyltransferase family protein {ECO:0000313|EMBL:KEO05557.1}; TaxID=1444179 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 2-177-06_S3_C3.;"
L3_105_245G1_scaffold_699_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17134..17691)
DNA (558bp) protein (186aa)
Ribose 1,5-bisphosphate phosphokinase PhnN {ECO:0000256|HAMAP-Rule:MF_00836}; EC=2.7.4.23 {ECO:0000256|HAMAP-Rule:MF_00836};; Ribose 1,5-bisphosphokinase {ECO:0000256|HAMAP-Rule:MF_00836}; TaxID=749532 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 78-1.;"
Ribose 1,5-bisphosphate phosphokinase PhnN n=294 Tax=Enterobacteriaceae RepID=J7QJI4_ECOLX
phnN; ribose 1,5-bisphosphokinase
L3_105_245G1_scaffold_699_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17691..18782)
DNA (1092bp) protein (364aa)
Phosphonate metabolism protein PhnM n=103 Tax=Escherichia coli RepID=A8A7J2_ECOHS
phnM; phosphonate metabolism protein PhnM
Phosphonate metabolism protein PhnM {ECO:0000313|EMBL:EFK43900.1}; TaxID=679206 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli MS 119-7.;"
Displaying 19 items

View Taxonomy