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L3_105_245G1_scaffold_705

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_105_245G1_scaffold_705_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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138..1010
DNA (873bp) protein (291aa)
Voltage gated chloride channel family protein n=1 Tax=Clostridium difficile P36 RepID=T4Q4V2_CLODI
Group I intron
Chloride ion channel protein {ECO:0000313|EMBL:CEJ97143.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_105_245G1_scaffold_705_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1689..2261)
DNA (573bp) protein (191aa)
Uncharacterized protein n=8 Tax=Clostridium difficile RepID=G6BV95_CLODI
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEJ97146.1}; Urea carboxylase {ECO:0000313|EMBL:CKH65525.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_105_245G1_scaffold_705_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2664..3233
DNA (570bp) protein (190aa)
Uncharacterized protein n=48 Tax=Clostridium difficile RepID=G6BV96_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CCL24817.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
hypothetical protein
L3_105_245G1_scaffold_705_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3569..4906)
DNA (1338bp) protein (446aa)
Two-component sensor histidine kinase n=3 Tax=Clostridium difficile RepID=U4BZ82_CLODI
Putative membrane protein {ECO:0000313|EMBL:EQG77297.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
Two-component sensor histidine kinase
L3_105_245G1_scaffold_705_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5516..6226)
DNA (711bp) protein (237aa)
Response regulator n=90 Tax=Clostridium difficile RepID=T3IE42_CLODC
two-component response regulator
Response regulator {ECO:0000313|EMBL:EQE69372.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_105_245G1_scaffold_705_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6508..8619)
DNA (2112bp) protein (704aa)
Efflux ABC transporter, permease protein n=6 Tax=Clostridium difficile RepID=G6BV99_CLODI
ABC-type transport system, permease
FtsX-like permease family protein {ECO:0000313|EMBL:EQE69382.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_105_245G1_scaffold_705_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8609..9361)
DNA (753bp) protein (251aa)
ABC-type transport system, ATP-binding protein (EC:3.6.3.-)
ABC transporter family protein n=137 Tax=Clostridium difficile RepID=T3IE37_CLODC
ABC transporter family protein {ECO:0000313|EMBL:EQE69377.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_105_245G1_scaffold_705_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9971..10426)
DNA (456bp) protein (152aa)
Putative membrane protein n=5 Tax=Clostridium difficile RepID=T2WTZ4_CLODI
Putative membrane protein {ECO:0000313|EMBL:EQG77650.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_105_245G1_scaffold_705_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10469..10645)
DNA (177bp) protein (59aa)
Uncharacterized protein n=101 Tax=Clostridium difficile RepID=C9XKQ1_CLODC
hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKH65341.1}; Uncharacterized protein {ECO:0000313|EMBL:CDS84373.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_105_245G1_scaffold_705_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10749..11399)
DNA (651bp) protein (217aa)
Transcriptional regulator, TetR family n=8 Tax=Clostridium difficile RepID=G6BVA3_CLODI
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CCL24824.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
TetR family transcriptional regulator
L3_105_245G1_scaffold_705_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11456..12280)
DNA (825bp) protein (275aa)
Transcriptional regulator, effector binding domain protein n=38 Tax=Clostridium difficile RepID=G6BVA4_CLODI
Transcriptional regulator, MerR family {ECO:0000313|EMBL:CCL24826.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Transcriptional regulator, MerR family
L3_105_245G1_scaffold_705_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12458..13351)
DNA (894bp) protein (298aa)
CAAX amino terminal protease family protein n=90 Tax=Clostridium difficile RepID=G6BVA5_CLODI
CAAX protease self-immunity family protein {ECO:0000313|EMBL:EQE69373.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
putative membrane protein
L3_105_245G1_scaffold_705_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13608..14045)
DNA (438bp) protein (146aa)
Transcriptional regulator, LytR family n=151 Tax=Clostridium difficile RepID=Q189F8_CLOD6
transcriptional regulator
Transcriptional regulator, LytR family {ECO:0000313|EMBL:CCL32624.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_105_245G1_scaffold_705_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14302..14451)
DNA (150bp) protein (50aa)
Uncharacterized protein n=34 Tax=Clostridium difficile RepID=Q189G4_CLOD6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ67451.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L3_105_245G1_scaffold_705_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14464..14694)
DNA (231bp) protein (77aa)
Uncharacterized protein n=190 Tax=Clostridium difficile RepID=C9XKQ6_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL24830.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L3_105_245G1_scaffold_705_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14699..15226)
DNA (528bp) protein (176aa)
Putative membrane protein n=4 Tax=Clostridium difficile RepID=F3Y5X8_CLOD6
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CCA62805.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L3_105_245G1_scaffold_705_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15512..15733)
DNA (222bp) protein (74aa)
Uncharacterized protein n=205 Tax=Clostridium difficile RepID=C9XKQ7_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE69310.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_105_245G1_scaffold_705_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16158..16298
DNA (141bp) protein (47aa)
Uncharacterized protein n=7 Tax=Clostridium difficile RepID=C9XKQ8_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBE02412.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L3_105_245G1_scaffold_705_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16313..16570
DNA (258bp) protein (86aa)
Uncharacterized protein n=79 Tax=Clostridium difficile RepID=G6BUZ6_CLODI
phage-related regulatory protein
Putative phage-related regulatory protein {ECO:0000313|EMBL:CBE02414.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L3_105_245G1_scaffold_705_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17039..18277
DNA (1239bp) protein (413aa)
Uncharacterized protein n=33 Tax=Clostridium difficile RepID=G6BUZ7_CLODI
Conserved phage family protein {ECO:0000313|EMBL:EQG77699.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
putative phage protein
Displaying 20 items

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